Example #1
0
 @Test
 public void testStratifyTrialSite() {
   validTrial.setStratifyTrialSite(true);
   assertTrue(validTrial.isStratifyTrialSite());
   validTrial.setStratifyTrialSite(false);
   assertFalse(validTrial.isStratifyTrialSite());
 }
Example #2
0
  @Test
  public void testStrataNamesAndIdsStrataTrialSite() {

    TrialSite site1 = new TrialSite();
    site1.setId(1);
    site1.setName("site1");

    TrialSite site2 = new TrialSite();
    site2.setId(2);
    site2.setName("site2");

    TrialSite site3 = new TrialSite();
    site3.setId(3);
    site3.setName("site3");

    TrialSite site4 = new TrialSite();
    site4.setId(4);
    site4.setName("site4");

    validTrial.addParticipatingSite(site1);
    validTrial.addParticipatingSite(site2);
    validTrial.addParticipatingSite(site3);
    validTrial.addParticipatingSite(site4);

    validTrial.setStratifyTrialSite(true);

    Pair<List<String>, List<String>> pair = validTrial.getAllStrataIdsAndNames();

    assertEquals(4, pair.first().size());
    assertEquals(4, pair.last().size());

    Collections.sort(pair.first());
    assertEquals("1__", pair.first().get(0));
    assertEquals("2__", pair.first().get(1));
    assertEquals("3__", pair.first().get(2));
    assertEquals("4__", pair.first().get(3));

    Collections.sort(pair.last());
    assertEquals("site1", pair.last().get(0));
    assertEquals("site2", pair.last().get(1));
    assertEquals("site3", pair.last().get(2));
    assertEquals("site4", pair.last().get(3));
  }
Example #3
0
  @Test
  public void testStrataNamesAndIdsStrataCriterionsTrialSite() {

    TrialSite site1 = new TrialSite();
    site1.setId(1);
    site1.setName("site1");

    TrialSite site2 = new TrialSite();
    site2.setId(2);
    site2.setName("site2");

    validTrial.addParticipatingSite(site1);
    validTrial.addParticipatingSite(site2);

    validTrial.setStratifyTrialSite(true);

    DichotomousCriterion criterion1 = new DichotomousCriterion();
    criterion1.setId(1);
    criterion1.setName("criterion1");
    criterion1.setOption1("option1");
    criterion1.setOption2("option2");
    try {
      DichotomousConstraint d1 = new DichotomousConstraint(Arrays.asList(new String[] {"option1"}));
      d1.setId(1);
      criterion1.addStrata(d1);
      DichotomousConstraint d2 = new DichotomousConstraint(Arrays.asList(new String[] {"option2"}));
      d2.setId(2);
      criterion1.addStrata(d2);
    } catch (ContraintViolatedException e) {
      fail();
    }
    DichotomousCriterion criterion2 = new DichotomousCriterion();
    criterion2.setId(2);
    criterion2.setName("criterion2");
    criterion2.setOption1("option1");
    criterion2.setOption2("option2");
    try {
      DichotomousConstraint d1 = new DichotomousConstraint(Arrays.asList(new String[] {"option1"}));
      d1.setId(1);
      criterion2.addStrata(d1);
      DichotomousConstraint d2 = new DichotomousConstraint(Arrays.asList(new String[] {"option2"}));
      d2.setId(2);
      criterion2.addStrata(d2);
    } catch (ContraintViolatedException e) {
      fail();
    }
    validTrial.addCriterion(criterion1);
    validTrial.addCriterion(criterion2);

    Pair<List<String>, List<String>> pair = validTrial.getAllStrataIdsAndNames();

    assertEquals(8, pair.first().size());
    assertEquals(8, pair.last().size());

    Collections.sort(pair.first());
    assertEquals("1__1_1;2_1;", pair.first().get(0));
    assertEquals("1__1_1;2_2;", pair.first().get(1));
    assertEquals("1__1_2;2_1;", pair.first().get(2));
    assertEquals("1__1_2;2_2;", pair.first().get(3));
    assertEquals("2__1_1;2_1;", pair.first().get(4));
    assertEquals("2__1_1;2_2;", pair.first().get(5));
    assertEquals("2__1_2;2_1;", pair.first().get(6));
    assertEquals("2__1_2;2_2;", pair.first().get(7));

    Collections.sort(pair.last());
    assertEquals("site1 | criterion1_option1;criterion2_option1;", pair.last().get(0));
    assertEquals("site1 | criterion1_option1;criterion2_option2;", pair.last().get(1));
    assertEquals("site1 | criterion1_option2;criterion2_option1;", pair.last().get(2));
    assertEquals("site1 | criterion1_option2;criterion2_option2;", pair.last().get(3));
    assertEquals("site2 | criterion1_option1;criterion2_option1;", pair.last().get(4));
    assertEquals("site2 | criterion1_option1;criterion2_option2;", pair.last().get(5));
    assertEquals("site2 | criterion1_option2;criterion2_option1;", pair.last().get(6));
    assertEquals("site2 | criterion1_option2;criterion2_option2;", pair.last().get(7));
  }