Example #1
0
  /*
   * (non-Javadoc)
   * @see net.java.treaty.ContractVocabulary#getDomain(java.net.URI)
   */
  public URI getDomain(URI relationshipOrProperty) throws TreatyException {

    OntModel model;
    model = getOntology();

    ObjectProperty property;
    property = model.getObjectProperty(relationshipOrProperty.toString());

    if (property != null) {

      try {
        return new URI(property.getDomain().getURI());
      } catch (URISyntaxException e) {
        throw new TreatyException(e);
      }
      // and catch.
    }
    // no else.

    DatatypeProperty dataProperty = model.getDatatypeProperty(relationshipOrProperty.toString());

    if (dataProperty != null) {

      try {
        return new URI(dataProperty.getDomain().getURI());
      } catch (URISyntaxException e) {
        throw new TreatyException(e);
      }
      // end catch.
    }
    // no else.

    return null;
  }
Example #2
0
 @Test
 public void dataAssertionTest() throws FileNotFoundException {
   model.read(
       this.getClass().getClassLoader().getResourceAsStream("test/data/misc/decimal-int.owl"),
       null);
   final Individual entity =
       model.getIndividual("http://www.inmindcomputing.com/example/dataAssertion.owl#ENTITY");
   final DatatypeProperty value =
       model.getDatatypeProperty(
           "http://www.inmindcomputing.com/example/dataAssertion.owl#dataAssertionValue");
   Assert.assertTrue(value.isFunctionalProperty());
   Assert.assertEquals(1, entity.listPropertyValues(value).toSet().size());
 }
Example #3
0
 public static void addVocab(OntModel model) {
   OntClass ontCurrency = model.createClass(URI);
   DatatypeProperty AMNT = model.createDatatypeProperty(AMNT_URI);
   DatatypeProperty CURRENCY = model.createDatatypeProperty(CURRENCY_URI);
   AMNT.addDomain(ontCurrency);
   AMNT.addRange(XSD.xfloat);
   CURRENCY.addDomain(ontCurrency);
   CURRENCY.addRange(XSD.xstring);
   ontCurrency.addLabel(label, null);
 }
    public void run() {
      while (pelletListener.isDirty()) {
        // pipeOpen = false;
        try {
          pelletListener.setDirty(false);
          inferenceRounds++;
          log.info("Getting new inferences");
          long startTime = System.currentTimeMillis();
          LinkedList<ObjectPropertyStatementPattern> irpl =
              new LinkedList<ObjectPropertyStatementPattern>();

          if (inferenceReceivingPatternAllowSet != null) {
            irpl.addAll(inferenceReceivingPatternAllowSet);
          } else {
            irpl.add(ObjectPropertyStatementPatternFactory.getPattern(null, null, null));
          }

          if (reasonerConfiguration.getQueryForAllObjectProperties()) {
            pelletModel.enterCriticalSection(Lock.READ);
            try {
              ClosableIterator closeIt = pelletModel.listObjectProperties();
              try {
                for (Iterator objPropIt = closeIt; objPropIt.hasNext(); ) {
                  ObjectProperty objProp = (ObjectProperty) objPropIt.next();
                  if (!("http://www.w3.org/2002/07/owl#".equals(objProp.getNameSpace()))) {
                    irpl.add(ObjectPropertyStatementPatternFactory.getPattern(null, objProp, null));
                  }
                }
              } finally {
                closeIt.close();
              }
            } finally {
              pelletModel.leaveCriticalSection();
            }
            deletedObjectProperties.enterCriticalSection(Lock.WRITE);
            try {
              ClosableIterator sit = deletedObjectProperties.listSubjects();
              try {
                while (sit.hasNext()) {
                  Resource subj = (Resource) sit.next();
                  irpl.add(
                      ObjectPropertyStatementPatternFactory.getPattern(
                          null, ResourceFactory.createProperty(subj.getURI()), null));
                }
              } finally {
                sit.close();
              }
              deletedObjectProperties.removeAll();
            } finally {
              deletedObjectProperties.leaveCriticalSection();
            }
          }

          if (reasonerConfiguration.getQueryForAllDatatypeProperties()) {
            pelletModel.enterCriticalSection(Lock.READ);
            try {
              ClosableIterator closeIt = pelletModel.listDatatypeProperties();
              try {
                for (Iterator dataPropIt = closeIt; dataPropIt.hasNext(); ) {
                  DatatypeProperty dataProp = (DatatypeProperty) dataPropIt.next();
                  if (!("http://www.w3.org/2002/07/owl#".equals(dataProp.getNameSpace()))) {
                    // TODO: THIS WILL WORK, BUT NEED TO GENERALIZE THE PATTERN CLASSES
                    irpl.add(
                        ObjectPropertyStatementPatternFactory.getPattern(null, dataProp, null));
                  }
                }
              } finally {
                closeIt.close();
              }
            } finally {
              pelletModel.leaveCriticalSection();
            }
            deletedDataProperties.enterCriticalSection(Lock.WRITE);
            try {
              ClosableIterator sit = deletedDataProperties.listSubjects();
              try {
                while (sit.hasNext()) {
                  Resource subj = (Resource) sit.next();
                  irpl.add(
                      ObjectPropertyStatementPatternFactory.getPattern(
                          null, ResourceFactory.createProperty(subj.getURI()), null));
                }
              } finally {
                sit.close();
              }
              deletedDataProperties.removeAll();
            } finally {
              deletedDataProperties.leaveCriticalSection();
            }
          }

          int addCount = 0;
          int retractCount = 0;

          // force new reasoner (disabled)
          if (false && !reasonerConfiguration.isIncrementalReasoningEnabled()) {
            Model baseModel = pelletModel.getBaseModel();
            pelletModel = ModelFactory.createOntologyModel(PelletReasonerFactory.THE_SPEC);
            pelletModel.getDocumentManager().setProcessImports(false);
            pelletModel.add(baseModel);
          }

          pelletModel.enterCriticalSection(Lock.WRITE);
          try {
            pelletModel.rebind();
            pelletModel.prepare();
          } finally {
            pelletModel.leaveCriticalSection();
          }

          for (Iterator<ObjectPropertyStatementPattern> patIt = irpl.iterator();
              patIt.hasNext(); ) {
            ObjectPropertyStatementPattern pat = patIt.next();

            if (log.isDebugEnabled()) {
              String subjStr = (pat.getSubject() != null) ? pat.getSubject().getURI() : "*";
              String predStr = (pat.getPredicate() != null) ? pat.getPredicate().getURI() : "*";
              String objStr = (pat.getObject() != null) ? pat.getObject().getURI() : "*";
              log.debug("Querying for " + subjStr + " : " + predStr + " : " + objStr);
            }

            Model tempModel = ModelFactory.createDefaultModel();

            pelletModel.enterCriticalSection(Lock.READ);
            try {

              ClosableIterator ci =
                  pelletModel.listStatements(pat.getSubject(), pat.getPredicate(), pat.getObject());
              try {
                for (ClosableIterator i = ci; i.hasNext(); ) {
                  Statement stmt = (Statement) i.next();

                  boolean reject = false;

                  // this next part is only needed if we're using Jena's OWL reasoner instead of
                  // actually using Pellet
                  try {
                    if ((((Resource) stmt.getObject()).equals(RDFS.Resource))) {
                      reject = true;
                    } else if ((((Resource) stmt.getSubject()).equals(OWL.Nothing))) {
                      reject = true;
                    } else if ((((Resource) stmt.getObject()).equals(OWL.Nothing))) {
                      reject = true;
                    }
                  } catch (Exception e) {
                  }

                  if (!reject) {
                    tempModel.add(stmt);

                    boolean fullModelContainsStatement = false;
                    fullModel.enterCriticalSection(Lock.READ);
                    try {
                      fullModelContainsStatement = fullModel.contains(stmt);
                    } finally {
                      fullModel.leaveCriticalSection();
                    }

                    if (!fullModelContainsStatement) {
                      // in theory we should be able to lock only the inference model, but I'm not
                      // sure yet if Jena propagates the locking upward
                      fullModel.enterCriticalSection(Lock.WRITE);
                      closePipe();
                      try {
                        inferenceModel.add(stmt);
                        addCount++;
                      } finally {
                        openPipe();
                        fullModel.leaveCriticalSection();
                      }
                    }
                  }
                }
              } finally {
                ci.close();
              }
            } finally {
              pelletModel.leaveCriticalSection();
            }

            // now we see what's in the inference model that isn't in the temp model and remove it

            try {
              Queue<Statement> localRemovalQueue = new LinkedList<Statement>();
              inferenceModel.enterCriticalSection(Lock.READ);
              try {
                ClosableIterator ci =
                    inferenceModel.listStatements(
                        pat.getSubject(), pat.getPredicate(), pat.getObject());
                try {
                  for (ClosableIterator i = ci; i.hasNext(); ) {
                    Statement stmt = (Statement) i.next();
                    if (!tempModel.contains(stmt)) {
                      localRemovalQueue.add(stmt);
                    }
                  }
                } finally {
                  ci.close();
                }
              } finally {
                inferenceModel.leaveCriticalSection();
              }
              for (Iterator<Statement> i = localRemovalQueue.iterator(); i.hasNext(); ) {
                fullModel.enterCriticalSection(Lock.WRITE);
                closePipe();
                try {
                  retractCount++;
                  inferenceModel.remove(i.next());
                } finally {
                  openPipe();
                  fullModel.leaveCriticalSection();
                }
              }

              localRemovalQueue.clear();
            } catch (Exception e) {
              log.error("Error getting inferences", e);
            }
            tempModel = null;
          }
          this.pelletListener.isConsistent = true;
          this.pelletListener.inErrorState = false;
          this.pelletListener.explanation = "";
          if (log.isDebugEnabled()) {
            log.info("Added " + addCount + " statements entailed by assertions");
            log.info("Retracted " + retractCount + " statements no longer entailed by assertions");
            log.info(
                "Done getting new inferences: "
                    + (System.currentTimeMillis() - startTime) / 1000
                    + " seconds");
          }
        } catch (InconsistentOntologyException ioe) {
          this.pelletListener.isConsistent = false;
          String explanation = ((PelletInfGraph) pelletModel.getGraph()).getKB().getExplanation();
          this.pelletListener.explanation = explanation;
          log.error(ioe);
          log.error(explanation);
        } catch (Exception e) {
          this.pelletListener.inErrorState = true;
          log.error("Exception during inference", e);
        } finally {
          pelletListener.endReasoning();
        }
      }
    }