@Override
public Resource objectToJena(Model toAddTo, Protocol protocol) throws IllegalArgumentException {
if (protocol.getResourceURL() == null) {
throw new IllegalArgumentException(String.format(msg_ResourceWithoutURI, "protocols"));
}
Resource res = toAddTo.createResource(protocol.getResourceURL().toString());
toAddTo.add(res, RDF.type, TOXBANK.PROTOCOL);
if (protocol.isSearchable() != null)
res.addLiteral(TOXBANK.ISSUMMARYSEARCHABLE, protocol.isSearchable());
res.addLiteral(TOXBANK.HASVERSIONINFO, protocol.getVersion());
if (protocol.getTitle() != null) res.addLiteral(DCTerms.title, protocol.getTitle());
if (protocol.getTimeModified() != null)
res.addLiteral(DCTerms.modified, protocol.getTimeModified());
if (protocol.getSubmissionDate() != null)
res.addLiteral(DCTerms.dateSubmitted, protocol.getSubmissionDate());
if (protocol.isPublished() != null) res.addLiteral(TOXBANK.ISPUBLISHED, protocol.isPublished());
if (protocol.getStatus() != null)
res.addLiteral(TOXBANK.HASSTATUS, protocol.getStatus().name());
if (protocol.getIdentifier() != null)
res.addLiteral(DCTerms.identifier, protocol.getIdentifier());
if (protocol.getAbstract() != null)
res.addLiteral(TOXBANK.HASABSTRACT, cleanLiteral(protocol.getAbstract()));
List<String> keywords = protocol.getKeywords();
if (keywords != null) {
for (String keyword : keywords) res.addLiteral(TOXBANK.HASKEYWORD, keyword);
}
if (protocol.getProjects() != null)
for (Project aproject : protocol.getProjects()) {
if (aproject.getResourceURL() == null)
throw new IllegalArgumentException(
String.format(msg_InvalidURI, "project", res.getURI()));
Resource project = projectIO.objectToJena(toAddTo, aproject);
res.addProperty(TOXBANK.HASPROJECT, project);
}
if (protocol.getOrganisation() != null) {
if (protocol.getOrganisation().getResourceURL() == null)
throw new IllegalArgumentException(
String.format(msg_InvalidURI, "organisation", res.getURI()));
Resource org = organisationIO.objectToJena(toAddTo, protocol.getOrganisation());
res.addProperty(TOXBANK.HASORGANISATION, org);
}
if (protocol.getOwner() != null) {
if (protocol.getOwner().getResourceURL() == null)
throw new IllegalArgumentException(
String.format(msg_InvalidURI, "protocol owner", res.getURI()));
Resource ownerRes = toAddTo.createResource(protocol.getOwner().getResourceURL().toString());
res.addProperty(TOXBANK.HASOWNER, ownerRes);
}
ToxBankResourceSet<User> authors = protocol.getAuthors();
if (authors != null)
for (User author : authors) {
if (author.getResourceURL() == null)
throw new IllegalArgumentException(String.format(msg_InvalidURI, "author", res.getURI()));
Resource user = userIO.objectToJena(toAddTo, author);
res.addProperty(TOXBANK.HASAUTHOR, user);
}
if (protocol.getDocument() != null) {
if (protocol.getDocument().getResourceURL() == null)
throw new IllegalArgumentException(String.format(msg_InvalidURI, "document", res.getURI()));
Resource documentRes =
toAddTo.createResource(protocol.getDocument().getResourceURL().toString());
res.addProperty(TOXBANK.HASDOCUMENT, documentRes);
}
if (protocol.getDataTemplate() != null) {
if (protocol.getDataTemplate().getResourceURL() == null)
throw new IllegalArgumentException(
String.format(msg_InvalidURI, "data template", res.getURI()));
Resource templateRes =
toAddTo.createResource(protocol.getDataTemplate().getResourceURL().toString());
res.addProperty(TOXBANK.HASTEMPLATE, templateRes);
}
if (protocol.getLicense() != null) {
toAddTo.add(res, DCTerms.license, toAddTo.createResource(protocol.getLicense().toString()));
}
return res;
}
