// an attempt for performance improvement: but does not seem faster for now
public static RInt expandXVectorCacheFriendly(IntImpl xarg, int xsize, int count) {
int nsize = xsize * count;
int[] x = xarg.getContent();
int[] res = new int[nsize];
int offset = 0;
int rep = 0;
int lastOffset = 0;
if (rep < count) {
System.arraycopy(x, 0, res, offset, xsize);
lastOffset = offset;
offset += xsize;
}
for (rep = 1; rep < count; rep++) {
System.arraycopy(res, lastOffset, res, offset, xsize);
lastOffset = offset;
offset += xsize;
}
return RInt.RIntFactory.getFor(res);
}
public static boolean hasGNUR() {
if (hasGNUR == -1) {
try {
System.loadLibrary("gnurglue");
hasGNUR = 1;
} catch (Throwable t) {
hasGNUR = 0;
}
}
return hasGNUR == 1;
}
public static RInt expandXVector(IntImpl xarg, int xsize, int count) {
int nsize = xsize * count;
int[] x = xarg.getContent();
int[] res = new int[nsize];
int offset = 0;
for (int rep = 0; rep < count; rep++) {
System.arraycopy(x, 0, res, offset, xsize);
offset += xsize;
}
return RInt.RIntFactory.getFor(res);
}
public static RDouble expandXVector(DoubleImpl xarg, int xsize, int count) {
int nsize = xsize * count;
double[] x = xarg.getContent();
double[] res = new double[nsize];
int offset = 0;
for (int rep = 0; rep < count; rep++) {
System.arraycopy(x, 0, res, offset, xsize);
offset += xsize;
}
return RDouble.RDoubleFactory.getFor(res);
}
public static double[] copyAsDoubleArray(RDouble d) {
int size = d.size();
if (size == 1) {
return new double[] {d.getDouble(0)};
} else {
double[] res = new double[size];
if (d instanceof DoubleImpl) {
System.arraycopy(((DoubleImpl) d).getContent(), 0, res, 0, size);
} else {
for (int i = 0; i < size; i++) {
res[i] = d.getDouble(i);
}
}
return res;
}
}
public RAny outer(Frame frame, RAny xarg, RAny yarg, RAny farg) {
// LICENSE: transcribed code from GNU R, which is licensed under GPL
if (!(xarg instanceof RArray && yarg instanceof RArray)) {
Utils.nyi("unsupported type");
return null;
}
RArray x = (RArray) xarg;
RArray y = (RArray) yarg;
int xsize = x.size();
int ysize = y.size();
RArray expy;
RArray expx;
if (EAGER) {
x = x.materialize(); // FIXME: probably unnecessary (both x and y), could be done on-the-fly in the expansion methods
y = y.materialize();
if (y instanceof DoubleImpl) {
expy = expandYVector((DoubleImpl) y, ysize, xsize);
} else if (y instanceof IntImpl) {
expy = expandYVector((IntImpl) y, ysize, xsize);
} else {
expy = expandYVector(y, ysize, xsize);
}
if (xsize > 0) {
if (x instanceof DoubleImpl) {
expx = expandXVector((DoubleImpl) x, xsize, ysize);
} else if (x instanceof IntImpl) {
expx = expandXVector((IntImpl) x, xsize, ysize);
} else {
expx = expandXVector(x, xsize, ysize);
}
} else {
expx = x;
}
} else {
if (y instanceof RInt) {
expy = lazyExpandYVector((RInt) y, ysize, xsize);
} else {
throw Utils.nyi();
}
if (xsize > 0) {
if (x instanceof RInt) {
expx = lazyExpandXVector((RInt) x, xsize, ysize);
} else {
throw Utils.nyi();
}
} else {
expx = x;
}
}
xArgProvider.setValue(expx);
yArgProvider.setValue(expy);
callableProvider.matchAndSet(frame, farg);
RArray res = (RArray) callNode.execute(frame);
int[] dimx = x.dimensions();
int[] dimy = y.dimensions();
int[] dim;
if (dimx == null) {
if (dimy == null) {
dim = new int[]{xsize, ysize};
} else {
dim = new int[1 + dimy.length];
dim[0] = xsize;
System.arraycopy(dimy, 0, dim, 1, dimy.length);
}
} else {
if (dimy == null) {
dim = new int[dimx.length + 1];
System.arraycopy(dimx, 0, dim, 0, dimx.length);
dim[dimx.length] = ysize;
} else {
dim = new int[dimx.length + dimy.length];
System.arraycopy(dimx, 0, dim, 0, dimx.length);
System.arraycopy(dimy, 0, dim, dimx.length, dimy.length);
}
}
return res.setDimensions(dim); // triggers materialization of the result
}
@Override
public Object execute(Frame frame) {
RAny lhsVal = (RAny) lhs.execute(frame);
RAny colVal = (RAny) columnExpr.execute(frame);
boolean dropVal =
dropExpr.executeLogical(frame)
!= RLogical.FALSE; // FIXME: what is the correct execution order of these args?
int exactVal = exactExpr.executeLogical(frame);
// TODO: GNU-R has different behavior when selecting from arrays that have some dimension zero
if (!(lhsVal instanceof RArray)) {
throw RError.getObjectNotSubsettable(ast, lhsVal.typeOf());
}
RArray array = (RArray) lhsVal;
int[] dim = array.dimensions();
if (dim == null || dim.length != nSelectors) {
throw RError.getIncorrectDimensions(getAST());
}
int n = dim[nSelectors - 1]; // limit for the column (last dimension)
try {
int col;
if (colVal instanceof ScalarIntImpl) {
col = ((ScalarIntImpl) colVal).getInt();
} else if (colVal instanceof ScalarDoubleImpl) {
col = Convert.double2int(((ScalarDoubleImpl) colVal).getDouble());
} else {
throw new UnexpectedResultException(null);
}
if (col > n || col <= 0) {
throw new UnexpectedResultException(null);
}
int[] ndim;
int m; // size of the result
if (dropVal) {
boolean hasNonTrivialDimension = false;
boolean resultIsVector = true;
m = 1;
for (int i = 0; i < nSelectors - 1; i++) {
int d = dim[i];
if (d != 1) {
if (hasNonTrivialDimension) {
resultIsVector = false;
} else {
hasNonTrivialDimension = true;
}
}
m *= d;
}
if (resultIsVector) {
ndim = null;
} else {
ndim = new int[nSelectors - 1];
System.arraycopy(dim, 0, ndim, 0, ndim.length);
}
} else {
ndim = new int[nSelectors];
ndim[nSelectors - 1] = 1;
m = 1;
for (int i = 0; i < ndim.length - 1; i++) {
int d = dim[i];
ndim[i] = d;
m *= d;
}
}
// note: also could be lazy here
RArray res = Utils.createArray(array, m, ndim, null, null); // drop attributes
int offset = (col - 1) * m; // note: col is 1-based
for (int i = 0; i < m; i++) {
res.set(i, array.getRef(offset + i));
}
return res;
} catch (UnexpectedResultException e) {
SelectorNode[] selectorExprs = new SelectorNode[nSelectors];
for (int i = 0; i < nSelectors - 1; i++) {
selectorExprs[i] = Selector.createSelectorNode(ast, true, null);
}
selectorExprs[nSelectors - 1] = Selector.createSelectorNode(ast, true, columnExpr);
GenericRead gr = new GenericRead(ast, true, lhs, selectorExprs, dropExpr, exactExpr);
replace(gr, "install GenericRead from ArrayColumnSubset");
for (int i = 0; i < nSelectors - 1; i++) {
gr.selectorVals[i] = selectorExprs[i].executeSelector(frame);
}
gr.selectorVals[nSelectors - 1] = selectorExprs[nSelectors - 1].executeSelector(colVal);
return gr.executeLoop(array, dropVal, exactVal);
}
}