// Lee la configuracion que se encuentra en conf/RegistryConf
private void readConfXml() {
try {
File inputFile = new File("src/java/Conf/RegistryConf.xml");
DocumentBuilderFactory dbFactory = DocumentBuilderFactory.newInstance();
DocumentBuilder dBuilder = dbFactory.newDocumentBuilder();
Document doc = dBuilder.parse(inputFile);
doc.getDocumentElement().normalize();
NodeList nList = doc.getElementsByTagName("RegistryConf");
for (int i = 0; i < nList.getLength(); i++) {
Node nNode = nList.item(i);
if (nNode.getNodeType() == Node.ELEMENT_NODE) {
Element eElement = (Element) nNode;
RegistryConf reg = new RegistryConf();
String aux;
int idSensor;
int value;
aux = eElement.getElementsByTagName("idSensor").item(0).getTextContent();
idSensor = Integer.parseInt(aux);
reg.setIdSensor(idSensor);
aux = eElement.getElementsByTagName("saveType").item(0).getTextContent();
reg.setSaveTypeString(aux);
aux = eElement.getElementsByTagName("value").item(0).getTextContent();
value = Integer.parseInt(aux);
reg.setValue(value);
registryConf.add(reg);
lastRead.put(idSensor, 0);
}
}
} catch (Exception e) {
e.printStackTrace();
}
}
/**
* Cools down the movement on the node.
*
* @param current Node to cool
* @param numOfIterations current state of layout process (heat)
*/
private void calculateNodeCooling(Node current, double numOfIterations) {
/* Check if cooling should start */
if (COOLING_START_DELAY < numOfIterations) {
double coolingFactor = 1 - ((numOfIterations - COOLING_START_DELAY) / COOLING_DIVIDER);
// double coolingFactor = 1 / COOLING_DIVIDER;
coolingFactor = Math.max(COOLING_FACTOR_MINIMUM, coolingFactor);
/* Do some cooling, to stop the mad bouncing */
double vx = current.getVX() * coolingFactor;
double vy = current.getVY() * coolingFactor;
/* if(vx > MIN_VX) {
current.setVX(vx);
}
else {
current.setVX(0);
}
if(vy > MIN_VY) {
current.setVY(vy);
}
else {
current.setVY(0);
}*/
current.setVX(current.getVX() * coolingFactor);
current.setVY(current.getVY() * coolingFactor);
}
}
/**
* The graph was resize so the algorithm must be adapted to the new size. Then mark dirty.
*
* @param w new width
* @param h new height
*/
private void setGraphSize(int w, int h) {
int oldWidth = width;
int oldHeight = height;
double relativeWidth, relativeHeight;
int newX, newY;
width = w;
height = h;
// Move the pinned nodes to adjust to the new size
ArrayList<Node> pinnedNodes = controller.getGraphPinned();
if (pinnedNodes != null) {
for (Node n : pinnedNodes) {
relativeWidth = (double) n.getX() / oldWidth;
relativeHeight = (double) n.getY() / oldHeight;
newX = (int) Math.round(width * relativeWidth);
newY = (int) Math.round(height * relativeHeight);
n.setX(newX);
n.setY(newY);
}
}
}
/**
* This function slows down a node's velocity based on it's weight. So that the heavier the node
* the less it moves.
*
* @param n node to apply friction for.
*/
private void applyNodeFriction(Node n) {
n.setVX(n.getVX() / n.getWeight());
n.setVY(n.getVY() / n.getWeight());
}
/**
* This helper calculates all the attractive forces onto a node. Attractive forces from from the
* edges pulling nodes towards each other, this will love through the edges of this node.
*
* @param current Node to calculate forces for.
*/
private void calculateNodeAttractiveForce(Node current) {
// get all the edges of the current node
ArrayList<Edge> nodeEdgeList = current.getEdgeList();
// of each of this node's edge do attactive forces
Iterator<Edge> nodeEdges = nodeEdgeList.iterator();
///
int numOfEdgesWeight = 10 * (int) Math.round(nodeEdgeList.size() + SPACING);
// Loop through edges and find edges containing current node
while (nodeEdges.hasNext()) {
Edge e = nodeEdges.next();
double edgeStrength = e.getStrength();
Node n;
int dx, dy;
double sign = 1.0;
if (current == e.getNode1()) {
n = e.getNode2();
dx = current.getX() - n.getX();
dy = current.getY() - n.getY();
} else {
n = e.getNode1();
dx = current.getX() - n.getX();
dy = current.getY() - n.getY();
sign = -1.0;
}
double distance = Math.sqrt(dx * dx + dy * dy) + .1;
// multiply by the strength of edge
// current.setVX(current.getVX() - dx / numOfEdgesWeight * edgeStrength);
// current.setVY(current.getVY() - dy / numOfEdgesWeight * edgeStrength);
current.accelx += sign * (dx * STIFFNESS * (SPRING_LENGTH - distance)) / current.weight;
current.accely += sign * (dy * STIFFNESS * (SPRING_LENGTH - distance)) / current.weight;
// current.accelx += sign * (dx * (e.getStrength() + 1) * (SPRING_LENGTH - distance) * 0.5) /
// current.weight;
// current.accely += sign * (dy * (e.getStrength() + 1) * (SPRING_LENGTH - distance) * 0.5) /
// current.weight;
// n.accelx += sign * (dx * (e.getStrength() + 1) * (SPRING_LENGTH - distance) * 0.5) /
// n.weight;
// n.accely += sign * (dy * (e.getStrength() + 1) * (SPRING_LENGTH - distance) * 0.5) /
// n.weight;
}
}
/**
* This helper method calculates the repulsive forces acting on a node from all the other nodes in
* the graph. BIG O( number of nodes )
*
* <p>There is a repulsive force between every nodes depending on the distance separating them and
* their size.
*
* @param current node to calculate forces for.
*/
private void calculateNodeRepulsiveForces(Node current) {
Iterator<Node> inner = controller.getNodeIterator();
int current_radius, n_radius, dx, dy;
Node n;
current_radius =
(int) Math.sqrt(Math.pow(current.getWidth(), 2) + Math.pow(current.getHeight(), 2));
while (inner.hasNext()) {
n = inner.next();
if (n != current) {
dx = current.getX() - n.getX();
dy = current.getY() - n.getY();
n_radius = (int) Math.sqrt(Math.pow(n.getWidth(), 2) + Math.pow(n.getHeight(), 2));
// only repel if nodes are connected or within diameter * MAX_REPEL_DISTANCE
// if (Math.sqrt(dx * dx + dy * dy) < (Math.max(current_radius, n_radius) *
// MAX_REPEL_MULTIPLIER)) {
double l = (dx * dx + dy * dy) + .1;
if (l > 0) {
// current.setVX(current.getVX() + dx * (current_radius * SPACING) / l);
// current.setVY(current.getVY() + dy * (current_radius * SPACING) / l);
current.accelx += (dx * REPULSION / (l)) / current.weight;
current.accely += (dy * REPULSION / (l)) / current.weight;
// current.accelx += (dx * SPACING / (l * .5)) / current.weight;
// current.accely += (dy * SPACING / (l * .5)) / current.weight;
// n.accelx += (dx * SPACING / (l * -0.5)) / n.weight;
// n.accely += (dy * SPACING / (l * -0.5)) / n.weight;
}
// }
}
}
}
/**
* Layout core logic.
*
* <p>This iterates over all the nodes and determines their velocities based on a force directed
* layout approach, performs collision detection/avoidance and then ultimately their new positions
* as they move.
*/
private void doLayout() {
double maxVelocity = 100;
double numOfIterations = 0;
double step = 100;
double skip = step;
int counter = 1;
boolean dividerChanged = false;
// active = true;
while (maxVelocity > 1 && active && (numOfIterations < MAX_NUM_OF_ITERATIONS)) {
counter++;
maxVelocity = 0;
numOfIterations++;
Iterator<Node> outer = controller.getNodeIterator();
startTime = System.currentTimeMillis();
double systemMovement = 0;
double kineticEnergy = 0;
/* Iterate over all nodes and calculate velocity */
while (outer.hasNext()) {
Node current = outer.next();
current.resetVelocity();
current.resetAcceleration();
/*
* If current node is not pinned or selected,
* perform force directed layout calculations here.
*/
if (!((current == controller.getGraphSelected()) || current.isPinned())) {
calculateNodeAttractiveForce(current);
calculateNodeRepulsiveForces(current);
// applyNodeFriction(current);
// if (IS_COOLING) {
// calculateNodeCooling(current, numOfIterations);
// }
// calculate velocities
current.setVX(current.getVX() + current.accelx * TIMESTEP * DAMPING);
current.setVY(current.getVY() + current.accely * TIMESTEP * DAMPING);
double speedSquared =
current.getVX() * current.getVX() + current.getVY() * current.getVY();
kineticEnergy += 0.5 * current.weight * speedSquared;
// cap the velocity
if (current.getVX() >= 0) {
current.setVX(Math.min(current.getVX(), MAX_DIST_PER_MOVE));
} else {
current.setVX(Math.max(current.getVX(), -MAX_DIST_PER_MOVE));
}
if (current.getVY() >= 0) {
current.setVY(Math.min(current.getVY(), MAX_DIST_PER_MOVE));
} else {
current.setVY(Math.max(current.getVY(), -MAX_DIST_PER_MOVE));
}
// System.out.println("vy "+ current.getVY() + ", vx " + current.getVX());
}
}
/* Iterate over all nodes move them after all the velocities are set */
outer = controller.getNodeIterator();
while (outer.hasNext()) {
Node current = outer.next();
int xStart = current.getX();
int yStart = current.getY();
/* update node position */
int xEnd = current.getX() + (int) current.getVX();
int yEnd = current.getY() + (int) current.getVY();
int dX = Math.abs(xStart - xEnd);
int dY = Math.abs(yStart - yEnd);
// systemMovement += dX;
// systemMovement += dY;
// if(dX + dY > 6) {
controller.moveNode(current, xEnd, yEnd);
// }
// controller.moveNode(current, Math.min(current.getX() + (int)
// current.getVX(),MAX_DIST_PER_MOVE), Math.min(current.getY() + (int) current.getVY(),
// MAX_DIST_PER_MOVE));
/* compute maxVelocity for layout iteration */
maxVelocity =
Math.max(
maxVelocity,
Math.sqrt(Math.pow(current.getVX(), 2) + Math.pow(current.getVY(), 2)));
}
if (kineticEnergy < ENERGY_THRESHOLD) {
numOfIterations = MAX_NUM_OF_ITERATIONS;
}
/* Make animation slower */
try {
Thread.sleep(sleepInterval);
} catch (InterruptedException ex) {
}
/* Calculate how long the iteration took */
stopTime = System.currentTimeMillis();
long duration = stopTime - startTime;
if ((duration > MAX_ITERATION_TIME) && (sleepInterval > 5)) {
sleepInterval -= 5;
} else if (duration < MIN_ITERATION_TIME) {
sleepInterval += 5;
}
if (numOfIterations > skip) {
skip += step;
System.out.print('.');
}
}
/* We've reached a stable layout, hold on for now */
stable = true;
// System.out.println("ran in " + numOfIterations + " iterations.");
}