@Override
public void initialize() throws OperatorException {
targetProduct = masterProduct;
validateSourceProducts();
if (includes == null || includes.length == 0) {
List<NodeDescriptor> nodeDescriptorList = new ArrayList<NodeDescriptor>();
for (final Product sourceProduct : sourceProducts) {
if (sourceProduct != targetProduct) {
for (String bandName : sourceProduct.getBandNames()) {
final NodeDescriptor nodeDescriptor = new NodeDescriptor();
nodeDescriptor.name = bandName;
nodeDescriptor.productId = getSourceProductId(sourceProduct);
nodeDescriptorList.add(nodeDescriptor);
}
}
}
includes = nodeDescriptorList.toArray(new NodeDescriptor[nodeDescriptorList.size()]);
}
if (!(excludes == null || excludes.length == 0)) {
throw new OperatorException("Defining excludes is not supported yet.");
}
Set<Product> allSrcProducts = new HashSet<Product>();
for (NodeDescriptor nodeDescriptor : includes) {
Product srcProduct = getSourceProduct(nodeDescriptor.productId);
if (srcProduct == targetProduct) {
continue;
}
if (StringUtils.isNotNullAndNotEmpty(nodeDescriptor.name)) {
if (StringUtils.isNotNullAndNotEmpty(nodeDescriptor.newName)) {
copyBandWithFeatures(srcProduct, nodeDescriptor.name, nodeDescriptor.newName);
} else {
copyBandWithFeatures(srcProduct, nodeDescriptor.name, nodeDescriptor.name);
}
allSrcProducts.add(srcProduct);
} else if (StringUtils.isNotNullAndNotEmpty(nodeDescriptor.namePattern)) {
Pattern pattern = Pattern.compile(nodeDescriptor.namePattern);
for (String bandName : srcProduct.getBandNames()) {
Matcher matcher = pattern.matcher(bandName);
if (matcher.matches()) {
copyBandWithFeatures(srcProduct, bandName, bandName);
allSrcProducts.add(srcProduct);
}
}
}
}
for (Product srcProduct : allSrcProducts) {
if (srcProduct != targetProduct) {
mergeAutoGrouping(srcProduct);
ProductUtils.copyMasks(srcProduct, targetProduct);
ProductUtils.copyOverlayMasks(srcProduct, targetProduct);
}
}
}
/** Create target product. */
private void createTargetProduct() {
targetProduct =
new Product(
sourceProduct.getName(),
sourceProduct.getProductType(),
sourceImageWidth,
sourceImageHeight);
ProductUtils.copyProductNodes(sourceProduct, targetProduct);
addSelectedBands();
final MetadataElement absTgt = AbstractMetadata.getAbstractedMetadata(targetProduct);
if (externalDEMFile != null) { // if external DEM file is specified by user
AbstractMetadata.setAttribute(absTgt, AbstractMetadata.DEM, externalDEMFile.getPath());
} else {
AbstractMetadata.setAttribute(absTgt, AbstractMetadata.DEM, demName);
}
absTgt.setAttributeString("DEM resampling method", demResamplingMethod);
if (externalDEMFile != null) {
absTgt.setAttributeDouble("external DEM no data value", externalDEMNoDataValue);
}
sourceGeoCoding = sourceProduct.getSceneGeoCoding();
targetProduct.setPreferredTileSize(targetProduct.getSceneRasterWidth(), tileSize);
}
@Override
public boolean validatePage() {
try {
crsSelectionPanel.getCrs(
ProductUtils.getCenterGeoPos(SnapApp.getDefault().getSelectedProduct()));
} catch (FactoryException ignored) {
return false;
}
return true;
}
private ImageInfo createDefaultImageInfo() {
try {
return ProductUtils.createImageInfo(getFormModel().getRasters(), false, ProgressMonitor.NULL);
} catch (IOException e) {
JOptionPane.showMessageDialog(
getContentPanel(),
"Failed to create default image settings:\n" + e.getMessage(),
"I/O Error",
JOptionPane.ERROR_MESSAGE);
return null;
}
}
private void copyBandWithFeatures(Product sourceProduct, String oldBandName, String newBandName) {
Band sourceBand = sourceProduct.getBand(oldBandName);
if (sourceBand == null) {
final String msg =
String.format(
"Source product [%s] does not contain a band with name [%s]",
sourceProduct.getName(), oldBandName);
throw new OperatorException(msg);
}
if (targetProduct.containsBand(newBandName)) {
return;
}
ProductUtils.copyBand(oldBandName, sourceProduct, newBandName, targetProduct, true);
}
@Override
public AbstractLayerSourceAssistantPage getNextPage() {
final LayerSourcePageContext context = getContext();
try {
final Product product = SnapApp.getDefault().getSelectedProduct();
final GeoPos referencePos = ProductUtils.getCenterGeoPos(product);
final CoordinateReferenceSystem crs = crsSelectionPanel.getCrs(referencePos);
context.setPropertyValue(ShapefileLayerSource.PROPERTY_NAME_FEATURE_COLLECTION_CRS, crs);
return new ShapefileAssistantPage3();
} catch (FactoryException e) {
e.printStackTrace();
context.showErrorDialog("Could not create CRS:\n" + e.getMessage());
}
return null;
}
private void addSelectedBands() {
// add selected source bands
if (sourceBandNames == null || sourceBandNames.length == 0) {
final Band[] bands = sourceProduct.getBands();
final List<String> bandNameList = new ArrayList<>(sourceProduct.getNumBands());
for (Band band : bands) {
String unit = band.getUnit();
if (unit == null || unit.contains(Unit.INTENSITY)) {
bandNameList.add(band.getName());
}
}
sourceBandNames = bandNameList.toArray(new String[bandNameList.size()]);
}
final Band[] sourceBands = new Band[sourceBandNames.length];
for (int i = 0; i < sourceBandNames.length; i++) {
final String sourceBandName = sourceBandNames[i];
final Band sourceBand = sourceProduct.getBand(sourceBandName);
if (sourceBand == null) {
throw new OperatorException("Source band not found: " + sourceBandName);
}
sourceBands[i] = sourceBand;
}
for (Band srcBand : sourceBands) {
final Band targetBand =
ProductUtils.copyBand(srcBand.getName(), sourceProduct, targetProduct, false);
targetBand.setSourceImage(srcBand.getSourceImage());
}
// add latitude and longitude bands
Band latBand =
new Band(LATITUDE_BAND_NAME, ProductData.TYPE_FLOAT64, sourceImageWidth, sourceImageHeight);
Band lonBand =
new Band(
LONGITUDE_BAND_NAME, ProductData.TYPE_FLOAT64, sourceImageWidth, sourceImageHeight);
targetProduct.addBand(latBand);
targetProduct.addBand(lonBand);
targetProduct.setSceneGeoCoding(new PixelGeoCoding(latBand, lonBand, null, 6));
}
/**
* Initializes this operator and sets the one and only target product.
*
* <p>The target product can be either defined by a field of type {@link Product} annotated with
* the {@link TargetProduct TargetProduct} annotation or by calling {@link #setTargetProduct}
* method.
*
* <p>The framework calls this method after it has created this operator. Any client code that
* must be performed before computation of tile data should be placed here.
*
* @throws OperatorException If an error occurs during operator initialisation.
* @see #getTargetProduct()
*/
@Override
public void initialize() throws OperatorException {
try {
targetProduct =
new Product(
sourceProduct.getName(),
sourceProduct.getProductType(),
sourceProduct.getSceneRasterWidth(),
sourceProduct.getSceneRasterHeight());
ProductUtils.copyProductNodes(sourceProduct, targetProduct);
dataType = ProductData.getType(targetDataType);
targetScaling = getScaling(targetScalingStr);
addSelectedBands();
} catch (Throwable e) {
throw new OperatorException(e);
}
}
private void addGeoTiffTags(final Product product) {
final GeoTIFFMetadata geoTIFFMetadata = ProductUtils.createGeoTIFFMetadata(product);
if (geoTIFFMetadata == null) {
return;
}
// for debug purpose
// geoTIFFMetadata.dump();
final int numEntries = geoTIFFMetadata.getNumGeoKeyEntries();
final TiffShort[] directoryTagValues = new TiffShort[numEntries * 4];
final ArrayList<TiffDouble> doubleValues = new ArrayList<>();
final ArrayList<String> asciiValues = new ArrayList<>();
for (int i = 0; i < numEntries; i++) {
final GeoTIFFMetadata.KeyEntry entry = geoTIFFMetadata.getGeoKeyEntryAt(i);
final int[] data = entry.getData();
for (int j = 0; j < data.length; j++) {
directoryTagValues[i * 4 + j] = new TiffShort(data[j]);
}
if (data[1] == TiffTag.GeoDoubleParamsTag.getValue()) {
directoryTagValues[i * 4 + 3] = new TiffShort(doubleValues.size());
final double[] geoDoubleParams = geoTIFFMetadata.getGeoDoubleParams(data[0]);
for (double geoDoubleParam : geoDoubleParams) {
doubleValues.add(new TiffDouble(geoDoubleParam));
}
}
if (data[1] == TiffTag.GeoAsciiParamsTag.getValue()) {
int sizeInBytes = 0;
for (String asciiValue : asciiValues) {
sizeInBytes += asciiValue.length() + 1;
}
directoryTagValues[i * 4 + 3] = new TiffShort(sizeInBytes);
asciiValues.add(geoTIFFMetadata.getGeoAsciiParam(data[0]));
}
}
setEntry(new TiffDirectoryEntry(TiffTag.GeoKeyDirectoryTag, directoryTagValues));
if (!doubleValues.isEmpty()) {
final TiffDouble[] tiffDoubles = doubleValues.toArray(new TiffDouble[doubleValues.size()]);
setEntry(new TiffDirectoryEntry(TiffTag.GeoDoubleParamsTag, tiffDoubles));
}
if (!asciiValues.isEmpty()) {
final String[] tiffAsciies = asciiValues.toArray(new String[asciiValues.size()]);
setEntry(new TiffDirectoryEntry(TiffTag.GeoAsciiParamsTag, new GeoTiffAscii(tiffAsciies)));
}
double[] modelTransformation = geoTIFFMetadata.getModelTransformation();
if (!isZeroArray(modelTransformation)) {
setEntry(
new TiffDirectoryEntry(
TiffTag.ModelTransformationTag, toTiffDoubles(modelTransformation)));
} else {
double[] modelPixelScale = geoTIFFMetadata.getModelPixelScale();
if (!isZeroArray(modelPixelScale)) {
setEntry(
new TiffDirectoryEntry(TiffTag.ModelPixelScaleTag, toTiffDoubles(modelPixelScale)));
}
final int numModelTiePoints = geoTIFFMetadata.getNumModelTiePoints();
if (numModelTiePoints > 0) {
final TiffDouble[] tiePoints = new TiffDouble[numModelTiePoints * 6];
for (int i = 0; i < numModelTiePoints; i++) {
final GeoTIFFMetadata.TiePoint modelTiePoint = geoTIFFMetadata.getModelTiePointAt(i);
final double[] data = modelTiePoint.getData();
for (int j = 0; j < data.length; j++) {
tiePoints[i * 6 + j] = new TiffDouble(data[j]);
}
}
setEntry(new TiffDirectoryEntry(TiffTag.ModelTiepointTag, tiePoints));
}
}
}