private PrivateInstanceLocal getPrivateInstance(
InstanceLocal instance, int type, PrivateSeriesLocal privSeries)
throws FinderException, CreateException {
Collection col = privInstHome.findBySopIuid(type, instance.getSopIuid());
PrivateInstanceLocal privInstance;
if (col.isEmpty()) {
if (privSeries == null) {
privSeries = getPrivateSeries(instance.getSeries(), type, null, false);
}
privInstance = privInstHome.create(type, instance.getAttributes(true), privSeries);
} else {
privInstance = (PrivateInstanceLocal) col.iterator().next();
}
Object[] files = instance.getFiles().toArray();
FileLocal file;
for (int i = 0; i < files.length; i++) {
file = (FileLocal) files[i];
privFileHome.create(
file.getFilePath(),
file.getFileTsuid(),
file.getFileSize(),
file.getFileMd5(),
file.getFileStatus(),
privInstance,
file.getFileSystem());
try {
file.remove();
} catch (Exception x) {
log.warn("Can not remove File record:" + file, x);
}
}
return privInstance;
}
private Dataset getStudyMgtDataset(StudyLocal study, Map mapSeries) {
Dataset ds = dof.newDataset();
ds.putUI(Tags.StudyInstanceUID, study.getStudyIuid());
ds.putOB(PrivateTags.StudyPk, Convert.toBytes(study.getPk().longValue()));
ds.putSH(Tags.AccessionNumber, study.getAccessionNumber());
ds.putLO(Tags.PatientID, study.getPatient().getPatientId());
ds.putLO(Tags.IssuerOfPatientID, study.getPatient().getIssuerOfPatientId());
ds.putPN(Tags.PatientName, study.getPatient().getPatientName());
log.debug("getStudyMgtDataset: studyIUID:" + study.getStudyIuid());
DcmElement refSeriesSeq = ds.putSQ(Tags.RefSeriesSeq);
Iterator iter =
(mapSeries == null) ? study.getSeries().iterator() : mapSeries.keySet().iterator();
while (iter.hasNext()) {
SeriesLocal sl = (SeriesLocal) iter.next();
Dataset dsSer = refSeriesSeq.addNewItem();
dsSer.putUI(Tags.SeriesInstanceUID, sl.getSeriesIuid());
Collection instances =
(mapSeries == null) ? sl.getInstances() : (Collection) mapSeries.get(sl);
Iterator iter2 = instances.iterator();
DcmElement refSopSeq = null;
if (iter2.hasNext()) refSopSeq = dsSer.putSQ(Tags.RefSOPSeq);
while (iter2.hasNext()) {
InstanceLocal il = (InstanceLocal) iter2.next();
Dataset dsInst = refSopSeq.addNewItem();
dsInst.putUI(Tags.RefSOPClassUID, il.getSopCuid());
dsInst.putUI(Tags.RefSOPInstanceUID, il.getSopIuid());
dsInst.putAE(Tags.RetrieveAET, il.getRetrieveAETs());
}
}
if (log.isDebugEnabled()) {
log.debug("return StgMgtDataset:");
log.debug(ds);
}
return ds;
}