/**
* Prints the XML bound to <em>empDoc</em>, uses XPath to retrieve elements containing work phone
* numbers, changes the numbers to another number, then prints the XML again to display the
* changes.
*
* <p>This method demonstrates the following characteristics of the selectPath method:
*
* <p>- it supports expressions that include predicates - the XML it returns is the XML queried
* against -- not a copy, as with results returned via execQuery methods and XQuery. Changes to
* this XML update the XML queried against. - selectPath called from an XMLBean type (instead of a
* cursor) returns an array of results (if any). These results can be cast to a matching type
* generated from schema.
*
* @param empDoc The incoming XML.
* @return <code>true</code> if the XPath expression returned results; otherwise, <code>false
* </code>.
*/
public boolean updateWorkPhone(XmlObject empDoc) {
boolean hasResults = false;
// Print the XML received.
System.out.println("XML as received by updateWorkPhone method: \n\n" + empDoc.toString());
// Create a variable with the query expression.
String pathExpression = "$this/xq:employees/xq:employee/xq:phone[@location='work']";
// Execute the query.
XmlObject[] results = empDoc.selectPath(m_namespaceDeclaration + pathExpression);
if (results.length > 0) {
hasResults = true;
// <phone> elements returned from the expression will conform to the
// schema, so bind them to the appropriate XMLBeans type generated
// from the schema.
PhoneType[] phones = (PhoneType[]) results;
// Change all the work phone numbers to the same number.
for (int i = 0; i < phones.length; i++) {
phones[i].setStringValue("(206)555-1234");
}
// Print the XML with updates.
System.out.println(
"\nXML as updated by updateWorkPhone method (each work \n"
+ "phone number has been changed to the same number): \n\n"
+ empDoc.toString()
+ "\n");
}
return hasResults;
}
@Override
public String encode(Resource resource, List<String> includeAttributes) {
try {
x0.scimSchemasCore1.Resource xmlResource = this.internalEncode(resource, includeAttributes);
Complex complex = resource.getClass().getAnnotation(Complex.class);
Class<?> factory = ReflectionHelper.getFactory(complex.xmlDoc());
XmlObject doc = (XmlObject) factory.getMethod("newInstance").invoke(null);
String name = complex.xmlType().getName();
String setterName = "set";
setterName += name.substring(name.lastIndexOf('.') + 1);
doc.getClass().getMethod(setterName, complex.xmlType()).invoke(doc, xmlResource);
return (PRETTY_PRINT ? doc.toString() : doc.xmlText());
} catch (FactoryNotFoundException e) {
throw new RuntimeException("Internal error, xml encode failed", e);
} catch (NoSuchMethodException e) {
throw new RuntimeException("Internal error, xml encode failed", e);
} catch (SecurityException e) {
throw new RuntimeException("Internal error, xml encode failed", e);
} catch (IllegalAccessException e) {
throw new RuntimeException("Internal error, xml encode failed", e);
} catch (IllegalArgumentException e) {
throw new RuntimeException("Internal error, xml encode failed", e);
} catch (InvocationTargetException e) {
throw new RuntimeException("Internal error, xml encode failed", e);
}
}
private String getCurrentValue(String xpath) {
XmlObject[] paths =
outlineEditor.getOutlineTable().getXmlObjectTreeModel().getXmlObject().selectPath(xpath);
String v = "";
for (XmlObject obj : paths) v += obj.toString();
return v;
}
@Override
protected void checkMessageStructure() throws MessageValidationException {
boolean messageStructureFailure = false;
try {
// Create a pseudo XML message
XmlObject pseudoMessage = XmlObject.Factory.newInstance();
XmlCursor pmCursor = pseudoMessage.newCursor();
pmCursor.toNextToken();
pmCursor.beginElement(profile.getMessageStructureID(), "urn:hl7-org:v2xml");
BufferedReader br = new BufferedReader(new StringReader(message.getMessageAsString()));
String line = null;
while ((line = br.readLine()) != null) {
if (!line.matches("\\s*")) {
String fieldSep = ((Er7Message) message).getFieldSeparatorChar();
try {
int idx = line.indexOf(fieldSep);
if (idx == -1 && line.length() <= 3) {
idx = 3;
}
line = line.substring(0, idx);
if (!line.startsWith("Z")) {
pmCursor.beginElement(line, "urn:hl7-org:v2xml");
pmCursor.toNextToken();
}
} catch (StringIndexOutOfBoundsException e) {
if (line.length() > 3) {
System.out.println(line);
}
}
}
}
pmCursor.dispose();
// Create a schema
StreamSource xsltStream =
new StreamSource(
MessageStructureValidationV2Er7.class
.getClassLoader()
.getResourceAsStream(MessageValidationConstants.XSLT_CHECK_STRUCTURE));
Transformer t = TransformerFactory.newInstance().newTransformer(xsltStream);
t.setParameter("groups", "false");
t.setParameter("xml", "false");
StreamSource src = new StreamSource(profile.getDocument().newInputStream());
ByteArrayOutputStream out = new ByteArrayOutputStream();
t.transform(src, new StreamResult(out));
XmlObject schemaDoc =
XmlObject.Factory.parse(
new ByteArrayInputStream(out.toByteArray()), (new XmlOptions()).setLoadLineNumbers());
// pseudoMessage.save(new File("tmp/mu/PseudoMessage.xml"));
// schemaDoc.save(new File("tmp/mu/Schema.xsd"));
// Load the schema
SchemaTypeLoader sLoader = null;
Collection<Object> compErrors = new ArrayList<Object>();
XmlOptions schemaOptions = new XmlOptions();
schemaOptions.setErrorListener(compErrors);
XmlObject[] schemas = new XmlObject[1];
schemas[0] = schemaDoc;
sLoader = XmlBeans.compileXsd(schemas, sLoader, schemaOptions);
// Load the Message
XmlObject xobj =
sLoader.parse(pseudoMessage.toString(), null, (new XmlOptions()).setLoadLineNumbers());
// Validate the Message against the schema
Collection<XmlValidationError> errors = new ArrayList<XmlValidationError>();
xobj.validate(new XmlOptions().setErrorListener(errors));
Iterator<XmlValidationError> it = errors.iterator();
while (it.hasNext()) {
XmlValidationError xve = it.next();
messageFailures.add(interpretSchemaError(xve));
messageStructureFailure = true;
}
} catch (XmlException xmle) {
// This type of exception is thrown when the generated schema is
// ambiguous
MessageFailureV2 mf = new MessageFailureV2(message.getEncoding());
mf.setDescription(
"The message validation can't be performed because the profile is ambiguous."
+ " Possible reasons for this problem include an ambiguous message definition"
+ " specified in the standard or an ambiguous message definition caused by the"
+ " user changing the Usage settings for segments during profile creation."
+ " Remember that a segment with the same name MUST be separated by at least one"
+ " non-optional segment with a different name.");
mf.setFailureSeverity(ErrorSeverityConstants.FATAL);
mf.setFailureType(AssertionTypeV2Constants.AMBIGUOUS_PROFILE);
messageFailures.add(mf);
} catch (Exception e) {
throw new MessageValidationException(e.getMessage());
} finally {
if (!messageStructureFailure) {
MessageFailureV2 mf = new MessageFailureV2(message.getEncoding());
mf.setDescription("The message structure at the segment level is correct.");
mf.setFailureSeverity(ErrorSeverityConstants.NORMAL);
mf.setFailureType(AssertionTypeV2Constants.CHECKED);
messageFailures.add(mf);
}
}
}
/**
* This method is to write the submitted application data to a pdfStream
*
* @param pdDoc Proposal Development Document.
* @return ByteArrayOutputStream[] of the submitted application data.
* @throws S2SException
*/
protected List<Printable> getSubmittedPDFStream(ProposalDevelopmentDocument pdDoc)
throws S2SException {
GrantApplicationDocument submittedDocument;
String frmXpath = null;
String frmAttXpath = null;
grantsGovXmlDirectoryFile = null;
try {
S2sAppSubmission s2sAppSubmission = getLatestS2SAppSubmission(pdDoc);
String submittedApplicationXml = findSubmittedXml(s2sAppSubmission);
String submittedApplication =
getS2SUtilService().removeTimezoneFactor(submittedApplicationXml);
submittedDocument = GrantApplicationDocument.Factory.parse(submittedApplication);
} catch (XmlException e) {
LOG.error(e.getMessage(), e);
throw new S2SException(e);
}
FormMappingInfo info = null;
S2SFormGenerator s2sFormGenerator = null;
List<AuditError> errors = new ArrayList<AuditError>();
List<String> sortedNameSpaces =
getSortedNameSpaces(pdDoc.getDevelopmentProposal().getS2sOppForms());
boolean formEntryFlag = true;
List<Printable> formPrintables = new ArrayList<Printable>();
for (String namespace : sortedNameSpaces) {
XmlObject formFragment = null;
try {
info = new FormMappingLoader().getFormInfo(namespace);
formFragment = getFormObject(submittedDocument, info);
frmXpath = "//*[namespace-uri(.) = '" + namespace + "']";
frmAttXpath =
"//*[namespace-uri(.) = '"
+ namespace
+ "']//*[local-name(.) = 'FileLocation' and namespace-uri(.) = 'http://apply.grants.gov/system/Attachments-V1.0']";
} catch (S2SGeneratorNotFoundException e) {
// Form generator not available for the namespace
continue;
}
// XmlObject formObject = s2sFormGenerator.getFormObject(formFragment);
// if (s2SValidatorService.validate(formObject, errors)) {
byte[] formXmlBytes = formFragment.xmlText().getBytes();
S2SFormPrint formPrintable = new S2SFormPrint();
ArrayList<Source> templates = new ArrayList<Source>();
Source xsltSource =
new StreamSource(getClass().getResourceAsStream("/" + info.getStyleSheet()));
templates.add(xsltSource);
formPrintable.setXSLT(templates);
// Linkedhashmap is used to preserve the order of entry.
Map<String, byte[]> formXmlDataMap = new LinkedHashMap<String, byte[]>();
formXmlDataMap.put(info.getFormName(), formXmlBytes);
formPrintable.setXmlDataMap(formXmlDataMap);
// S2sAppSubmission submittedS2SAppSubmission = getLatestS2SAppSubmission(pdDoc);
S2sApplication s2sApplciation =
getBusinessObjectService()
.findBySinglePrimaryKey(
S2sApplication.class,
pdDoc
.getDevelopmentProposal()
.getProposalNumber()); // submittedS2SAppSubmission.getS2sApplication();
List<S2sAppAttachments> attachmentList = s2sApplciation.getS2sAppAttachmentList();
Map<String, byte[]> formAttachments = new LinkedHashMap<String, byte[]>();
try {
XPathExecutor executer = new XPathExecutor(formFragment.toString());
org.w3c.dom.Node d = executer.getNode(frmXpath);
org.w3c.dom.NodeList attList = XPathAPI.selectNodeList(d, frmAttXpath);
int attLen = attList.getLength();
for (int i = 0; i < attLen; i++) {
org.w3c.dom.Node attNode = attList.item(i);
String contentId =
((Element) attNode)
.getAttributeNS("http://apply.grants.gov/system/Attachments-V1.0", "href");
if (attachmentList != null && !attachmentList.isEmpty()) {
for (S2sAppAttachments attAppAttachments : attachmentList) {
if (attAppAttachments.getContentId().equals(contentId)) {
ByteArrayOutputStream attStream = new ByteArrayOutputStream();
try {
attStream.write(getAttContent(pdDoc, attAppAttachments.getContentId()));
} catch (IOException e) {
LOG.error(e.getMessage(), e);
throw new S2SException(e);
}
StringBuilder attachment = new StringBuilder();
attachment.append(" ATT : ");
attachment.append(attAppAttachments.getContentId());
formAttachments.put(
attachment.toString(), getAttContent(pdDoc, attAppAttachments.getContentId()));
}
}
}
}
} catch (Exception e) {
LOG.error(e.getMessage(), e);
}
try {
if (pdDoc.getDevelopmentProposal().getGrantsGovSelectFlag()) {
List<AttachmentData> attachmentLists = new ArrayList<AttachmentData>();
saveGrantsGovXml(pdDoc, formEntryFlag, formFragment, attachmentLists, attachmentList);
formEntryFlag = false;
}
} catch (Exception e) {
LOG.error(e.getMessage(), e);
}
formPrintable.setAttachments(formAttachments);
formPrintables.add(formPrintable);
// }
}
return formPrintables;
}