@Override
  public int run(String[] args) throws Exception {
    JobConf conf = JobBuilder.parseInputAndOutput(this, getConf(), args);
    if (conf == null) {
      return -1;
    }

    conf.setInputFormat(SequenceFileInputFormat.class);
    conf.setOutputKeyClass(IntWritable.class);
    conf.setOutputFormat(SequenceFileOutputFormat.class);
    SequenceFileOutputFormat.setCompressOutput(conf, true);
    SequenceFileOutputFormat.setOutputCompressorClass(conf, GzipCodec.class);
    SequenceFileOutputFormat.setOutputCompressionType(conf, CompressionType.BLOCK);

    conf.setPartitionerClass(TotalOrderPartitioner.class);

    InputSampler.Sampler<IntWritable, Text> sampler =
        new InputSampler.RandomSampler<IntWritable, Text>(0.1, 10000, 10);

    Path input = FileInputFormat.getInputPaths(conf)[0];
    input = input.makeQualified(input.getFileSystem(conf));

    Path partitionFile = new Path(input, "_partitions");
    TotalOrderPartitioner.setPartitionFile(conf, partitionFile);
    InputSampler.writePartitionFile(conf, sampler);

    // Add to DistributedCache
    URI partitionUri = new URI(partitionFile.toString() + "#_partitions");
    DistributedCache.addCacheFile(partitionUri, conf);
    DistributedCache.createSymlink(conf);

    JobClient.runJob(conf);
    return 0;
  }
Ejemplo n.º 2
0
  public static void main(String[] args) throws Exception {
    String dir1 = "/user/miyuru/wcout";
    String dir2 = "/user/miyuru/notinverts";
    // We first delete the temporary directories if they exist on the HDFS
    FileSystem fs1 = FileSystem.get(new JobConf());

    if (fs1.exists(new Path(dir2))) {
      fs1.delete(new Path(dir2), true);
    }

    JobConf conf = new JobConf();
    conf.setNumMapTasks(96);
    conf.setOutputKeyClass(LongWritable.class);
    conf.setOutputValueClass(LongWritable.class);
    conf.setMapperClass(TokenizerMapper.class);
    conf.setReducerClass(IntSumReducer.class);
    conf.setCombinerClass(IntSumReducer.class);
    conf.setInputFormat(NLinesInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);
    FileInputFormat.setInputPaths(conf, new Path(dir1));
    FileOutputFormat.setOutputPath(conf, new Path(dir2));
    Job job = new Job(conf, "NotInFinder");
    job.setJarByClass(WordCount.class);
    //   job.setMapperClass(TokenizerMapper.class);
    //   job.setCombinerClass(IntSumReducer.class);
    //   job.setReducerClass(IntSumReducer.class);
    //   job.setOutputKeyClass(LongWritable.class);
    //   job.setOutputValueClass(LongWritable.class);

    job.setSortComparatorClass(SortComparator.class);
    job.waitForCompletion(true);
  }
Ejemplo n.º 3
0
  public static void getData(CloudataConf conf, Path keyPath) throws IOException {
    JobConf jobConf = new JobConf(TeraReadJob.class);
    jobConf.set("user.name", conf.getUserId());
    String libDir = CloudataMapReduceUtil.initMapReduce(jobConf);

    Path tempOutputPath = new Path("ManyTableJob_Get_" + System.currentTimeMillis());

    jobConf.setJobName("ManyTableJob_Get_" + "(" + new Date() + ")");

    TextOutputFormat.setOutputPath(jobConf, tempOutputPath);
    // <MAP>
    jobConf.setMapperClass(ManyTableGetMap.class);
    jobConf.setInputFormat(TextInputFormat.class);
    TextInputFormat.addInputPath(jobConf, keyPath);
    jobConf.setMapSpeculativeExecution(false);
    jobConf.setMaxMapAttempts(0);
    // </MAP>

    // <REDUCE>
    jobConf.setNumReduceTasks(0);
    // </REDUCE>

    try {
      // Run Job
      JobClient.runJob(jobConf);
    } finally {
      // delete temp output path
      FileSystem fs = FileSystem.get(jobConf);
      FileUtil.delete(fs, tempOutputPath, true);
      CloudataMapReduceUtil.clearMapReduce(libDir);
    }
  }
  @Override
  public int run(String[] args) throws Exception {
    JobConf conf = new JobConf(getConf(), getClass());
    conf.setJobName("UFO count");

    String[] otherArgs = new GenericOptionsParser(conf, args).getRemainingArgs();
    if (otherArgs.length != 2) {
      System.err.println("Usage: avro UFO counter <in> <out>");
      System.exit(2);
    }

    FileInputFormat.addInputPath(conf, new Path(otherArgs[0]));
    Path outputPath = new Path(otherArgs[1]);
    FileOutputFormat.setOutputPath(conf, outputPath);
    outputPath.getFileSystem(conf).delete(outputPath);
    Schema input_schema = Schema.parse(getClass().getResourceAsStream("ufo.avsc"));
    AvroJob.setInputSchema(conf, input_schema);
    AvroJob.setMapOutputSchema(
        conf,
        Pair.getPairSchema(Schema.create(Schema.Type.STRING), Schema.create(Schema.Type.LONG)));

    AvroJob.setOutputSchema(conf, OUTPUT_SCHEMA);
    AvroJob.setMapperClass(conf, AvroRecordMapper.class);
    AvroJob.setReducerClass(conf, AvroRecordReducer.class);
    conf.setInputFormat(AvroInputFormat.class);
    JobClient.runJob(conf);

    return 0;
  }
Ejemplo n.º 5
0
  public static void main(String[] args) throws Exception {
    String input = "hdfs://centos:9000/access.log.10";
    String output = "hdfs://centos:9000/out_kpitime";

    JobConf conf = new JobConf(KPITime.class);
    conf.setJobName("KPITime");
    //        conf.addResource("classpath:/hadoop/core-site.xml");
    //        conf.addResource("classpath:/hadoop/hdfs-site.xml");
    //        conf.addResource("classpath:/hadoop/mapred-site.xml");

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(IntWritable.class);

    conf.setMapperClass(KPITimeMapper.class);
    conf.setCombinerClass(KPITimeReducer.class);
    conf.setReducerClass(KPITimeReducer.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(input));
    FileOutputFormat.setOutputPath(conf, new Path(output));

    JobClient.runJob(conf);
    System.exit(0);
  }
Ejemplo n.º 6
0
  public RunningJob run(String inputPath, String outputPath) throws Exception {

    JobConf conf = new JobConf(BuildIndex.class);
    conf.setJobName("BuildIndex");

    FileInputFormat.addInputPath(conf, new Path(inputPath)); // multiple path
    FileOutputFormat.setOutputPath(conf, new Path(outputPath));

    conf.setOutputFormat(TextOutputFormat.class);

    conf.setMapOutputKeyClass(LongWritable.class);
    conf.setMapOutputValueClass(LongWritable.class);
    conf.set("delim", delim);
    conf.setOutputKeyClass(LongWritable.class);
    conf.setOutputValueClass(LongWritable.class);
    conf.setInt("keyFieldIndexTwo", keyFieldIndexTwo);
    conf.setMapperClass(BuildIndexMapper.class);
    conf.setNumReduceTasks(1);
    conf.setReducerClass(BuildIndexReducer.class);

    conf.setInputFormat(TextInputFormat.class);
    // conf.setInputFormat(CustomInputFormat.class);
    // FileOutputFormat.setCompressOutput(conf,true);
    // delete the output directory if it exists already

    FileSystem.get(conf).delete(new Path(outputPath), true);

    return JobClient.runJob(conf);
  }
  public RunningJob run(String inputPath, String outputPath) throws Exception {
    sLogger.info("Tool name: Compressible");
    sLogger.info(" - input: " + inputPath);
    sLogger.info(" - output: " + outputPath);

    // JobConf conf = new JobConf(Stats.class);
    JobConf conf = new JobConf(Compressible.class);
    conf.setJobName("Compressible " + inputPath);

    BrushConfig.initializeConfiguration(conf);

    FileInputFormat.addInputPath(conf, new Path(inputPath));
    FileOutputFormat.setOutputPath(conf, new Path(outputPath));

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    conf.setMapOutputKeyClass(Text.class);
    conf.setMapOutputValueClass(Text.class);

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    conf.setMapperClass(CompressibleMapper.class);
    conf.setReducerClass(CompressibleReducer.class);

    // delete the output directory if it exists already
    FileSystem.get(conf).delete(new Path(outputPath), true);

    return JobClient.runJob(conf);
  }
Ejemplo n.º 8
0
  /**
   * Run the job
   *
   * @param params The Job parameters containing the gramSize, input output folders, defaultCat,
   *     encoding
   */
  public static void runJob(Parameters params) throws IOException {
    Configurable client = new JobClient();
    JobConf conf = new JobConf(BayesClassifierDriver.class);
    conf.setJobName("Bayes Classifier Driver running over input: " + params.get("testDirPath"));
    conf.setOutputKeyClass(StringTuple.class);
    conf.setOutputValueClass(DoubleWritable.class);

    FileInputFormat.setInputPaths(conf, new Path(params.get("testDirPath")));
    Path outPath = new Path(params.get("testDirPath") + "-output");
    FileOutputFormat.setOutputPath(conf, outPath);

    conf.setInputFormat(KeyValueTextInputFormat.class);
    conf.setMapperClass(BayesClassifierMapper.class);
    conf.setCombinerClass(BayesClassifierReducer.class);
    conf.setReducerClass(BayesClassifierReducer.class);
    conf.setOutputFormat(SequenceFileOutputFormat.class);

    conf.set(
        "io.serializations",
        "org.apache.hadoop.io.serializer.JavaSerialization,"
            + "org.apache.hadoop.io.serializer.WritableSerialization");

    HadoopUtil.overwriteOutput(outPath);
    conf.set("bayes.parameters", params.toString());

    client.setConf(conf);
    JobClient.runJob(conf);

    Path outputFiles = new Path(outPath, "part*");
    FileSystem dfs = FileSystem.get(outPath.toUri(), conf);
    ConfusionMatrix matrix = readResult(dfs, outputFiles, conf, params);
    log.info("{}", matrix.summarize());
  }
  /**
   * Configure the job
   *
   * @param conf Job to configure
   * @param rules classification rules to evaluate
   * @param target label value to evaluate the rules for
   * @param inpath input path (the dataset)
   * @param outpath output <code>Path</code>
   * @param split DatasetSplit used to separate training and testing input
   */
  private static void configureJob(
      JobConf conf,
      List<? extends Rule> rules,
      int target,
      Path inpath,
      Path outpath,
      DatasetSplit split) {
    split.storeJobParameters(conf);

    FileInputFormat.setInputPaths(conf, inpath);
    FileOutputFormat.setOutputPath(conf, outpath);

    conf.setOutputKeyClass(LongWritable.class);
    conf.setOutputValueClass(CDFitness.class);

    conf.setMapperClass(CDMapper.class);
    conf.setCombinerClass(CDReducer.class);
    conf.setReducerClass(CDReducer.class);

    conf.setInputFormat(DatasetTextInputFormat.class);
    conf.setOutputFormat(SequenceFileOutputFormat.class);

    // store the parameters
    conf.set(CDMapper.CLASSDISCOVERY_RULES, StringUtils.toString(rules));
    conf.set(CDMapper.CLASSDISCOVERY_DATASET, StringUtils.toString(DataSet.getDataSet()));
    conf.setInt(CDMapper.CLASSDISCOVERY_TARGET_LABEL, target);
  }
Ejemplo n.º 10
0
  public static void runSortJob(String... args) throws Exception {

    Path input = new Path(args[0]);
    Path output = new Path(args[1]);

    JobConf job = new JobConf();

    job.setNumReduceTasks(2);

    job.setInputFormat(KeyValueTextInputFormat.class);
    job.setOutputFormat(TextOutputFormat.class);

    job.setMapOutputKeyClass(Text.class);
    job.setMapOutputValueClass(Text.class);

    FileInputFormat.setInputPaths(job, input);
    FileOutputFormat.setOutputPath(job, output);

    job.setJarByClass(SampleJob.class);

    output.getFileSystem(job).delete(output, true);

    JobClient jc = new JobClient(job);
    JobClient.setTaskOutputFilter(job, JobClient.TaskStatusFilter.ALL);
    RunningJob rj = jc.submitJob(job);
    try {
      if (!jc.monitorAndPrintJob(job, rj)) {
        System.out.println("Job Failed: " + rj.getFailureInfo());
        throw new IOException("Job failed!");
      }
    } catch (InterruptedException ie) {
      Thread.currentThread().interrupt();
    }
  }
  public static void runJob(String[] args) {
    JobConf conf = new JobConf(CassandraBulkLoader.class);

    if (args.length >= 4) {
      conf.setNumReduceTasks(new Integer(args[3]));
    }

    try {
      // We store the cassandra storage-conf.xml on the HDFS cluster
      DistributedCache.addCacheFile(new URI("/cassandra/storage-conf.xml#storage-conf.xml"), conf);
    } catch (URISyntaxException e) {
      throw new RuntimeException(e);
    }
    conf.setInputFormat(KeyValueTextInputFormat.class);
    conf.setJobName("CassandraBulkLoader_v2");
    conf.setMapperClass(Map.class);
    conf.setReducerClass(Reduce.class);

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    FileInputFormat.setInputPaths(conf, new Path(args[1]));
    FileOutputFormat.setOutputPath(conf, new Path(args[2]));
    try {
      JobClient.runJob(conf);
    } catch (IOException e) {
      throw new RuntimeException(e);
    }
  }
Ejemplo n.º 12
0
  /**
   * {@inheritDoc}
   *
   * @see org.apache.hadoop.util.Tool#run(java.lang.String[])
   */
  @Override
  public int run(String[] args) throws Exception {
    JobConf configuration = new JobConf(getConf(), WordCountExtended.class);
    configuration.setJobName(JOB_NAME);

    configuration.setOutputKeyClass(Text.class);
    configuration.setOutputValueClass(IntWritable.class);

    configuration.setMapperClass(Map.class);
    configuration.setCombinerClass(Reduce.class);
    configuration.setReducerClass(Reduce.class);

    configuration.setInputFormat(TextInputFormat.class);
    configuration.setOutputFormat(TextOutputFormat.class);

    List<String> otherArgs = new ArrayList<String>();
    for (int i = 0; i < args.length; ++i) {
      if (JOB_SKIP_ARGUMENT.equals(args[i])) {
        DistributedCache.addCacheFile(new Path(args[++i]).toUri(), configuration);
        configuration.setBoolean(JOB_PARAMETER_SKIP_PATTERNS, true);
      } else {
        otherArgs.add(args[i]);
      }
    }

    FileInputFormat.setInputPaths(configuration, new Path(otherArgs.get(0)));
    FileOutputFormat.setOutputPath(configuration, new Path(otherArgs.get(1)));

    JobClient.runJob(configuration);
    return 0;
  }
Ejemplo n.º 13
0
  public static void run(Map<String, String> path) throws IOException {
    JobConf conf = Recommend.config();

    String input = path.get("Step2Input");
    String output = path.get("Step2Output");

    HdfsDAO hdfs = new HdfsDAO(Recommend.HDFS, conf);
    hdfs.rmr(output);

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(IntWritable.class);

    conf.setMapperClass(Step2_UserVectorToCooccurrenceMapper.class);
    //        conf.setCombinerClass(Step2_UserVectorToConoccurrenceReducer.class);
    //        conf.setReducerClass(Step2_UserVectorToConoccurrenceReducer.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(input));
    FileOutputFormat.setOutputPath(conf, new Path(output));

    RunningJob job = JobClient.runJob(conf);
    while (!job.isComplete()) {
      job.waitForCompletion();
    }
  }
  public static void main(String[] args) throws Exception {

    JobConf conf = new JobConf(AccessProcessJob.class);
    conf.set(nameNode, hdfsURL);
    conf.setJobName("AccessProcessJob");
    Job job = Job.getInstance(conf, "AccessProcessJob");

    new Path(outputPath).getFileSystem(conf).delete(new Path(outputPath), true);
    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    conf.setMapperClass(AccessProcessMap.class);
    conf.setReducerClass(AccessProcessReduce.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(job, new Path(inputPath));
    FileOutputFormat.setOutputPath(job, new Path(outputPath));

    conf.setNumMapTasks(1);
    conf.setNumReduceTasks(1);

    JobClient.runJob(conf);
  }
  public void runMR(String myMultiLocs, String sortKey)
      throws ParseException, IOException, Exception, org.apache.hadoop.zebra.parser.ParseException {

    JobConf jobConf = new JobConf(conf);
    jobConf.setJobName("TestMultipleOutputs4");
    jobConf.setJarByClass(TestMultipleOutputs4.class);
    jobConf.set("table.output.tfile.compression", "gz");
    jobConf.set("sortKey", sortKey);
    // input settings
    jobConf.setInputFormat(TextInputFormat.class);
    jobConf.setMapperClass(TestMultipleOutputs4.MapClass.class);
    jobConf.setMapOutputKeyClass(BytesWritable.class);
    jobConf.setMapOutputValueClass(ZebraTuple.class);
    FileInputFormat.setInputPaths(jobConf, inputPath);

    jobConf.setNumMapTasks(1);

    // output settings

    jobConf.setOutputFormat(BasicTableOutputFormat.class);
    BasicTableOutputFormat.setMultipleOutputs(
        jobConf, myMultiLocs, TestMultipleOutputs4.OutputPartitionerClass.class);

    // set the logical schema with 2 columns
    BasicTableOutputFormat.setSchema(jobConf, "word:string, count:int");
    // for demo purposes, create 2 physical column groups
    BasicTableOutputFormat.setStorageHint(jobConf, "[word];[count]");
    BasicTableOutputFormat.setSortInfo(jobConf, sortKey);
    System.out.println("in runMR, sortkey: " + sortKey);
    // set map-only job.
    jobConf.setNumReduceTasks(1);
    JobClient.runJob(jobConf);
    BasicTableOutputFormat.close(jobConf);
  }
Ejemplo n.º 16
0
  public RunningJob run(String inputPath, String outputPath) throws Exception {
    sLogger.info("Tool name: BuildGraph");
    sLogger.info(" - input: " + inputPath);
    sLogger.info(" - output: " + outputPath);

    JobConf conf = new JobConf(BuildGraph.class);
    conf.setJobName("BuildGraph " + inputPath + " " + ContrailConfig.K);

    ContrailConfig.initializeConfiguration(conf);

    FileInputFormat.addInputPath(conf, new Path(inputPath));
    FileOutputFormat.setOutputPath(conf, new Path(outputPath));

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    conf.setMapOutputKeyClass(Text.class);
    conf.setMapOutputValueClass(Text.class);

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    conf.setMapperClass(BuildGraphMapper.class);
    conf.setReducerClass(BuildGraphReducer.class);

    // delete the output directory if it exists already
    FileSystem.get(conf).delete(new Path(outputPath), true);

    return JobClient.runJob(conf);
  }
Ejemplo n.º 17
0
  public static void main(String[] args) throws Exception {
    String input = "hdfs://192.168.0.110:9000/input/access.log";
    String output = "hdfs://192.168.0.110:9000/user/hdfs/pv";

    JobConf conf = new JobConf(KPIPV.class);
    conf.setJobName("KPIPV");

    conf.setMapOutputKeyClass(Text.class);
    conf.setMapOutputValueClass(IntWritable.class);

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(IntWritable.class);

    conf.setMapperClass(KPIPVMapper.class);
    conf.setCombinerClass(KPIPVReducer.class);
    conf.setReducerClass(KPIPVReducer.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(input));
    FileOutputFormat.setOutputPath(conf, new Path(output));

    JobClient.runJob(conf);
    System.exit(0);
  }
  public int run(String[] args) throws Exception {

    if (args.length < 2) {
      printUsage();
      return 1;
    }

    JobConf job = new JobConf(getConf(), MultiFileWordCount.class);
    job.setJobName("MultiFileWordCount");

    // set the InputFormat of the job to our InputFormat
    job.setInputFormat(MyInputFormat.class);

    // the keys are words (strings)
    job.setOutputKeyClass(Text.class);
    // the values are counts (ints)
    job.setOutputValueClass(IntWritable.class);

    // use the defined mapper
    job.setMapperClass(MapClass.class);
    // use the WordCount Reducer
    job.setCombinerClass(LongSumReducer.class);
    job.setReducerClass(LongSumReducer.class);

    FileInputFormat.addInputPaths(job, args[0]);
    FileOutputFormat.setOutputPath(job, new Path(args[1]));

    JobClient.runJob(job);

    return 0;
  }
Ejemplo n.º 19
0
  /**
   * This is the main routine for launching a distributed random write job. It runs 10 maps/node and
   * each node writes 1 gig of data to a DFS file. The reduce doesn't do anything.
   *
   * @throws IOException
   */
  public int run(String[] args) throws Exception {
    if (args.length == 0) {
      System.out.println("Usage: writer <out-dir>");
      ToolRunner.printGenericCommandUsage(System.out);
      return -1;
    }

    Path outDir = new Path(args[0]);
    JobConf job = new JobConf(getConf());

    job.setJarByClass(RandomWriter.class);
    job.setJobName("random-writer");
    FileOutputFormat.setOutputPath(job, outDir);

    job.setOutputKeyClass(BytesWritable.class);
    job.setOutputValueClass(BytesWritable.class);

    job.setInputFormat(RandomInputFormat.class);
    job.setMapperClass(Map.class);
    job.setReducerClass(IdentityReducer.class);
    job.setOutputFormat(SequenceFileOutputFormat.class);

    JobClient client = new JobClient(job);
    ClusterStatus cluster = client.getClusterStatus();
    /** 如果属性不存在 则返回默认的值 * */
    int numMapsPerHost = job.getInt("test.randomwriter.maps_per_host", 10);
    long numBytesToWritePerMap =
        job.getLong("test.randomwrite.bytes_per_map", 1 * 1024 * 1024 * 1024);
    if (numBytesToWritePerMap == 0) {
      System.err.println("Cannot have test.randomwrite.bytes_per_map set to 0");
      return -2;
    }
    long totalBytesToWrite =
        job.getLong(
            "test.randomwrite.total_bytes",
            numMapsPerHost * numBytesToWritePerMap * cluster.getTaskTrackers());
    int numMaps = (int) (totalBytesToWrite / numBytesToWritePerMap);
    if (numMaps == 0 && totalBytesToWrite > 0) {
      numMaps = 1;
      job.setLong("test.randomwrite.bytes_per_map", totalBytesToWrite);
    }

    job.setNumMapTasks(numMaps);
    /** 建议型的 * */
    System.out.println("Running " + numMaps + " maps.");

    // reducer NONE
    job.setNumReduceTasks(0);

    Date startTime = new Date();
    System.out.println("Job started: " + startTime);
    JobClient.runJob(job);
    Date endTime = new Date();
    System.out.println("Job ended: " + endTime);
    System.out.println(
        "The job took " + (endTime.getTime() - startTime.getTime()) / 1000 + " seconds.");

    return 0;
  }
Ejemplo n.º 20
0
  /* (non-Javadoc)
   * @see org.apache.hadoop.chukwa.analysis.HiTune.AnalysisProcessor#run()
   */
  @Override
  public void run() {
    // TODO Auto-generated method stub

    long timestamp = System.currentTimeMillis();

    JobConf conf = new JobConf(this.conf, InstrumentDataflow.class);
    try {
      conf.setJobName(this.getClass().getSimpleName() + timestamp);
      conf.setInputFormat(MultiSequenceFileInputFormat.class);
      conf.setMapperClass(InstrumentDataflow.MapClass.class);
      conf.setReducerClass(InstrumentDataflow.ReduceClass.class);
      conf.setOutputKeyClass(Text.class);
      Class<? extends WritableComparable> outputKeyClass =
          Class.forName(conf.get(AnalysisProcessorConfiguration.mapoutputKeyClass))
              .asSubclass(WritableComparable.class);
      Class<? extends Writable> outputValueClass =
          Class.forName(conf.get(AnalysisProcessorConfiguration.mapoutputValueClass))
              .asSubclass(Writable.class);
      conf.setMapOutputKeyClass(outputKeyClass);
      conf.setMapOutputValueClass(outputValueClass);

      conf.setOutputValueClass(TextArrayWritable.class);
      conf.setOutputFormat(CSVFileOutputFormat.class);

      String outputPaths =
          conf.get(AnalysisProcessorConfiguration.reportfolder)
              + "/"
              + conf.get(AnalysisProcessorConfiguration.reportfile);
      String temp_outputPaths = getTempOutputDir(outputPaths);

      if (this.inputfiles != null) {
        log.debug("inputPaths:" + inputfiles);
        FileInputFormat.setInputPaths(conf, inputfiles);
        FileOutputFormat.setOutputPath(conf, new Path(temp_outputPaths));

        // FileInputFormat.setInputPathFilter(conf, evtFileFilter.class);
        // conf.setNumReduceTasks(1);

        try {
          JobClient.runJob(conf);
          moveResults(conf, outputPaths, temp_outputPaths);
        } catch (IOException e) {
          // TODO Auto-generated catch block
          log.warn("For " + getOutputFileName() + " :JOB fails!");
          log.warn(e);
          e.printStackTrace();
          this.MOVE_DONE = false;
        }

      } else {
        log.warn("For " + getOutputFileName() + " :No input path!");
      }
    } catch (Exception e) {
      log.warn("Job preparation failure!");
      log.warn(e);
      e.printStackTrace();
    }
  }
Ejemplo n.º 21
0
  public int run(String[] args) throws Exception {
    if (args.length < 4) {
      System.out.println("ERROR: Please Enter args : input output type(text|seq) splitChar(9=\t)");
      return JobClient.SUCCESS;
    }
    String input = args[0];
    String output = args[1];
    String type = args[2];
    String splitChar = args[3];

    JobConf config = new JobConf(getConf(), getClass());
    config.set("user.split", splitChar);

    config.setJobName("File Filter -" + System.currentTimeMillis());
    config.setNumReduceTasks(10);
    config.setReducerClass(IdentityReducer.class);
    config.setMapperClass(FileTestMapper.class);
    if ("text".equals(type)) {
      config.setInputFormat(TextInputFormat.class);
      TextInputFormat.addInputPath(config, new Path(input));
    } else {
      config.setInputFormat(SequenceFileInputFormat.class);
      SequenceFileInputFormat.addInputPath(config, new Path(input));
    }
    config.setMapOutputKeyClass(Text.class);
    config.setMapOutputValueClass(Text.class);

    config.setOutputKeyClass(Text.class);
    config.setOutputValueClass(Text.class);

    // if output path exists then return
    FileSystem fs = FileSystem.get(config);
    Path outputPath = new Path(output);
    FileOutputFormat.setOutputPath(config, outputPath);

    if (!fs.exists(outputPath)) {
      JobClient.runJob(config);
    } else {
      System.out.println("You has finished this job today ! " + outputPath);
    }

    return JobClient.SUCCESS;
  }
Ejemplo n.º 22
0
  @Override
  public int run(String[] args) throws Exception {
    if (args.length != 2) {
      System.err.printf(
          "Usage: %s [generic options] <input> <output>\n", getClass().getSimpleName());
      ToolRunner.printGenericCommandUsage(System.err);
      return -1;
    }

    // get configuration
    Configuration conf = getConf();
    CommonUtility.printConfiguration(conf);

    // create a JobConf
    JobConf jobconf = new JobConf(conf);

    // set name
    jobconf.setJobName("CommonTestJob");

    // set input/output path
    Path in = new Path(args[0]);
    Path out = new Path(args[1]);
    FileInputFormat.setInputPaths(jobconf, in);
    FileOutputFormat.setOutputPath(jobconf, out);

    // set input/output format
    jobconf.setInputFormat(SequenceFileInputFormat.class);
    jobconf.setOutputFormat(SequenceFileOutputFormat.class);

    // set output key/value
    jobconf.setOutputKeyClass(Text.class);
    jobconf.setOutputValueClass(RRIntervalWritable.class);

    // set mapper/reducer class
    jobconf.setMapperClass(CommonTestMapper.class);
    jobconf.setReducerClass(IdentityReducer.class);

    // MultipleInputs.addInputPath(jobconf, new
    // Path("hdfs://localhost/work/lab/ecg/rrSeqMulti"),
    // SequenceFileInputFormat.class, CommonTestMapper.class);
    //
    // MultipleInputs.addInputPath(jobconf, new
    // Path("hdfs://localhost/work/lab/ecg/rrSeqSingle"),
    // SequenceFileInputFormat.class, IdentityMapper.class);

    jobconf.setNumReduceTasks(0);

    JobClient.runJob(jobconf);

    // --- end---

    CommonUtility.printConfiguration(jobconf);

    return 0;
  }
Ejemplo n.º 23
0
  public static void main(String[] args) throws IOException {

    /*JobConf conf = new JobConf();

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    conf.setMapperClass(IpCounterMapper.class);
    conf.setCombinerClass(IpCounterReducer.class);
    conf.setReducerClass(IpCounterReducer.class);


    String inputDir = args[0];
    String outputDir = args[1];

    FileInputFormat.setInputPaths(conf, inputDir);
    FileOutputFormat.setOutputPath(conf, new Path(outputDir));

    boolean flag = JobClient.runJob(conf).isSuccessful();

    System.out.println(args.length);*/

    if (args.length < 2) {
      System.out.println("args not right!");
      return;
    }

    JobConf conf = new JobConf(IpCount1.class);

    // set output key class
    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    // set mapper & reducer class
    conf.setMapperClass(IpCounterMapper.class);
    conf.setCombinerClass(IpCounterReducer.class);
    conf.setReducerClass(IpCounterReducer.class);

    // set format
    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    String inputDir = args[0];
    String outputDir = args[1];

    // FileInputFormat.setInputPaths(conf, "/user/hadoop/rongxin/locationinput/");
    FileInputFormat.setInputPaths(conf, inputDir);
    FileOutputFormat.setOutputPath(conf, new Path(outputDir));

    boolean flag = JobClient.runJob(conf).isSuccessful();
  }
Ejemplo n.º 24
0
  @Override
  public int run(String[] args) throws Exception {

    System.out.println("\n\nConvolutionJob\n");
    JobConf conf = new JobConf(getConf(), ConvolutionJob.class);
    conf.setJobName("ConvolutionJob");

    this.cacheKernel(conf);
    this.CreateRats(conf);
    conf.setMapperClass(ConvolutionMapper.class);
    List<String> other_args = new ArrayList<String>();
    for (int i = 0; i < args.length; ++i) {
      try {
        if ("-m".equals(args[i])) {
          conf.setNumMapTasks(Integer.parseInt(args[++i]));
        } else if ("-r".equals(args[i])) {
          conf.setNumReduceTasks(Integer.parseInt(args[++i]));
        } else {
          other_args.add(args[i]);
        }
      } catch (NumberFormatException except) {
        System.out.println("ERROR: Integer expected instead of " + args[i]);
        return printUsage();
      } catch (ArrayIndexOutOfBoundsException except) {
        System.out.println("ERROR: Required parameter missing from " + args[i - 1]);
        return printUsage();
      }
    }

    // Make sure there are exactly 2 parameters left.
    if (other_args.size() != 2) {
      System.out.println(
          "ERROR: Wrong number of parameters: " + other_args.size() + " instead of 2.");
      return printUsage();
    }

    conf.setNumReduceTasks(0);
    conf.setInputFormat(NonSplittableTextInputFormat.class);
    conf.setOutputFormat(MultiFileOutput.class);
    conf.setOutputKeyClass(NullWritable.class);
    conf.setOutputValueClass(Text.class);
    conf.setCompressMapOutput(true);
    conf.set("mapred.output.compression.codec", "org.apache.hadoop.io.compress.SnappyCodec");
    conf.set("mapred.output.compression.type", "BLOCK");

    FileInputFormat.setInputPaths(conf, other_args.get(0));
    FileOutputFormat.setOutputPath(conf, new Path(other_args.get(1)));
    // FileOutputFormat.setCompressOutput(conf, true);

    JobClient.runJob(conf);

    return 0;
  }
Ejemplo n.º 25
0
  @SuppressWarnings("rawtypes")
  @Override
  public void sourceConfInit(
      FlowProcess<JobConf> fp, Tap<JobConf, RecordReader, OutputCollector> tap, JobConf jobConf) {

    if (filterPredicate != null) {
      ParquetInputFormat.setFilterPredicate(jobConf, filterPredicate);
    }

    jobConf.setInputFormat(DeprecatedParquetInputFormat.class);
    ParquetInputFormat.setReadSupportClass(jobConf, TupleReadSupport.class);
    TupleReadSupport.setRequestedFields(jobConf, getSourceFields());
  }
Ejemplo n.º 26
0
  /**
   * @param process
   * @param tap
   * @param conf
   */
  @Override
  public void sourceConfInit(
      FlowProcess<JobConf> process, Tap<JobConf, RecordReader, OutputCollector> tap, JobConf conf) {
    MongoConfigUtil.setReadSplitsFromShards(conf, true);
    MongoConfigUtil.setInputURI(conf, this.mongoUri);
    FileInputFormat.setInputPaths(conf, this.getIdentifier());
    conf.setInputFormat(MongoInputFormat.class);

    // TODO: MongoConfigUtil.setFields(conf, fieldsBson);
    // if (!this.query.isEmpty())
    MongoConfigUtil.setQuery(conf, this.query);
    // TODO: MongoConfigUtil.setFields(conf, fields);
  }
Ejemplo n.º 27
0
 public static void main(String[] args) throws Exception {
   JobConf conf = new JobConf(ExtractorTask.class);
   conf.setJobName("Wikipedia Extrator");
   conf.setMapperClass(MyMapper.class);
   conf.setMapOutputKeyClass(Text.class);
   conf.setMapOutputValueClass(Text.class);
   conf.setInputFormat(TextInputFormat.class);
   conf.setOutputFormat(CsvOutputFormat.class);
   conf.setNumReduceTasks(0);
   FileInputFormat.setInputPaths(conf, args[1]);
   CsvOutputFormat.setOutputPath(conf, new Path(args[2]));
   JobClient.runJob(conf);
 }
  private void runRankOrdering(String inputPath, String outputPath) throws IOException {
    JobConf conf = new JobConf(WikiPageRanking.class);

    conf.setOutputKeyClass(FloatWritable.class);
    conf.setOutputValueClass(Text.class);
    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(inputPath));
    FileOutputFormat.setOutputPath(conf, new Path(outputPath));

    conf.setMapperClass(RankingMapper.class);

    JobClient.runJob(conf);
  }
Ejemplo n.º 29
0
  public int run(String[] args) throws Exception {
    JobConf conf = new JobConf(this.getClass());
    conf.setJobName("Domain-MR2");

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    conf.setMapperClass(Map.class);
    conf.setReducerClass(Reduce.class);
    //		        conf.setReducerClass(IdentityReducer.class);

    conf.setInputFormat(TextInputFormat.class);
    //		conf.setOutputFormat(TextOutputFormat.class);
    conf.setOutputFormat(MultiFileOutput.class);

    FileSystem fs = FileSystem.get(conf);
    fs.delete(new Path(args[1]), true); // delete output dir

    FileInputFormat.setInputPaths(conf, new Path(args[0]));
    FileOutputFormat.setOutputPath(conf, new Path(args[1]));

    int reducers = 272;
    int mappers = 272;
    conf.setNumMapTasks(reducers);
    conf.setNumReduceTasks(mappers);

    // set parameters
    conf.set("k", "" + k);
    conf.set("r", "" + k);
    conf.set("parts", "" + parts); // number of partitions per dimension

    System.out.println(
        "running DOMAIN with k="
            + k
            + " r="
            + r
            + " parts="
            + parts
            + " "
            + "useCellBasedAlgo="
            + useCellBasedAlgo
            + " reducers="
            + reducers
            + " mappers="
            + mappers);
    JobClient.runJob(conf);
    return 0;
  }
Ejemplo n.º 30
0
  @Override
  public int run(String[] args) throws Exception {
    if (args.length != 1) {
      String message =
          "Incorrect arguments -- requires 1 argument.\n\t "
              + "1) directory containing N-triples \n\t";
      throw new Exception(message);
    }

    String triples = args[0];
    String outputDir = args[1];

    Path outputPath = new Path(outputDir);
    Configuration fconf = new Configuration();
    FileSystem fs = FileSystem.get(fconf);

    if (fs.exists(outputPath)) {
      fs.delete(outputPath, true);
    }

    JobConf jobConf = new JobConf(this.getClass());
    jobConf.setJobName("MongoHadoopMR");

    Path pOutput = new Path(outputDir);

    FileOutputFormat.setOutputPath(jobConf, pOutput);

    jobConf.setInputFormat(KeyValueTextInputFormat.class);
    //		jobConf.setOutputFormat(MongoOutputFormat.class);

    jobConf.setOutputKeyClass(Text.class);
    jobConf.setOutputValueClass(Text.class);

    FileInputFormat.setInputPaths(jobConf, new Path(triples));

    jobConf.setMapperClass(Map.class);
    jobConf.setNumReduceTasks(0);
    //		jobConf.setReducerClass(Reduce.class);

    jobConf.setMapOutputKeyClass(Text.class);
    jobConf.setMapOutputValueClass(Text.class);

    RunningJob job = JobClient.runJob(jobConf);

    if (!job.isSuccessful()) System.out.println("Hadoop Job Failed");

    return 0;
  }