Ejemplo n.º 1
0
 public String toString() {
   StringBuffer sb = new StringBuffer();
   for (int idx = 0; idx < volumes.length; idx++) {
     sb.append(volumes[idx].toString());
     if (idx != volumes.length - 1) {
       sb.append(",");
     }
   }
   return sb.toString();
 }
Ejemplo n.º 2
0
 private static String stringifyPathArray(Path[] p) {
   if (p == null) {
     return null;
   }
   StringBuffer str = new StringBuffer(p[0].toString());
   for (int i = 1; i < p.length; i++) {
     str.append(",");
     str.append(p[i].toString());
   }
   return str.toString();
 }
Ejemplo n.º 3
0
  @SuppressWarnings("unchecked")
  public void testCommitter() throws Exception {
    JobConf job = new JobConf();
    setConfForFileOutputCommitter(job);
    JobContext jContext = new JobContextImpl(job, taskID.getJobID());
    TaskAttemptContext tContext = new TaskAttemptContextImpl(job, taskID);
    FileOutputCommitter committer = new FileOutputCommitter();
    FileOutputFormat.setWorkOutputPath(job, committer.getTempTaskOutputPath(tContext));

    committer.setupJob(jContext);
    committer.setupTask(tContext);
    String file = "test.txt";

    // A reporter that does nothing
    Reporter reporter = Reporter.NULL;
    // write output
    FileSystem localFs = FileSystem.getLocal(job);
    TextOutputFormat theOutputFormat = new TextOutputFormat();
    RecordWriter theRecordWriter = theOutputFormat.getRecordWriter(localFs, job, file, reporter);
    writeOutput(theRecordWriter, reporter);

    // do commit
    committer.commitTask(tContext);
    committer.commitJob(jContext);

    // validate output
    File expectedFile = new File(new Path(outDir, file).toString());
    StringBuffer expectedOutput = new StringBuffer();
    expectedOutput.append(key1).append('\t').append(val1).append("\n");
    expectedOutput.append(val1).append("\n");
    expectedOutput.append(val2).append("\n");
    expectedOutput.append(key2).append("\n");
    expectedOutput.append(key1).append("\n");
    expectedOutput.append(key2).append('\t').append(val2).append("\n");
    String output = UtilsForTests.slurp(expectedFile);
    assertEquals(output, expectedOutput.toString());

    FileUtil.fullyDelete(new File(outDir.toString()));
  }
Ejemplo n.º 4
0
  public int run(String[] args) throws IOException, ClassNotFoundException, InterruptedException {

    if (args.length != 2) {
      System.out.println("Usage: FeatureMatching ID <inputName.jpeg/inputName.jpg>");
      System.exit(1);
    }

    SimpleDateFormat sdf = new SimpleDateFormat("", Locale.US);
    sdf.applyPattern("yyyy-MM-dd_HH-mm-ss");
    String time = sdf.format(new Date());

    Job job = Job.getInstance();

    ID = "/" + args[0];
    String filename = args[1];
    filename = filename.toLowerCase();
    System.out.println("current filename:" + filename);

    // Detect illegal username (if the username dir doesn't exist)
    File userPath = new File(LOCAL_USER_DIR + ID);
    if (!userPath.exists()) {
      System.out.println("Unauthorized username!!!\nExiting......");
      System.exit(1);
    }
    // Preprocess the input image.jpg from local dir: /local.../user/ID/input/image.jpg
    // Save the features to local dir: hdfs://.../user/ID/input/image.jpg
    extractQueryFeatures2HDFS(filename, job);

    // Add the feature file to the hdfs cache
    String featureFileName = filename.substring(0, filename.lastIndexOf(".")) + ".json";
    //        job.addCacheFile(new Path(HDFS_HOME + USER + ID + INPUT + "/" +
    // featureFileName).toUri());
    job.getConfiguration()
        .set("featureFilePath", HDFS_HOME + USER + ID + INPUT + "/" + featureFileName);

    // Check the file type. Only support jpeg/jpg type images
    String type = filename.substring(args[1].lastIndexOf("."));
    if (!(type.equals(".jpg") || type.equals(".jpeg"))) {
      System.out.println("Image type not supported!!!\nExiting");
      System.exit(1);
    }

    // Input: hdfs://.../features/
    // The feature dir is a location of all features extracted from the database
    String inputPathStr = HDFS_HOME + FEATURES;
    // Output: hdfs://.../user/ID/output/
    String outputPathStr = HDFS_HOME + USER + ID + OUTPUT + "/" + time;

    job.setInputFormatClass(KeyValueTextInputFormat.class);
    //        job.setOutputFormatClass(TextOutputFormat.class);

    // Get the lists of all feature files: /.../features/data/part-*
    FileSystem fs = FileSystem.get(job.getConfiguration());
    FileStatus[] statuses = fs.listStatus(new Path(inputPathStr));
    StringBuffer sb = new StringBuffer();
    for (FileStatus fileStatus : statuses) {
      sb.append(fileStatus.getPath() + ",");
    }
    sb.deleteCharAt(sb.lastIndexOf(","));

    job.setJarByClass(FeatureMatching.class);
    job.setMapperClass(FeatureMatchMapper.class);
    job.setReducerClass(FeatureMatchReducer.class);

    // only need one reducer to collect the result
    job.setNumReduceTasks(1);

    job.setMapOutputKeyClass(IntWritable.class);
    job.setMapOutputValueClass(Text.class);

    job.setOutputKeyClass(Text.class);
    job.setOutputValueClass(DoubleWritable.class);

    // Input a directory, so need the recursive input
    FileInputFormat.setInputDirRecursive(job, true);
    // Set the PathFilter, to omit _SUCCESS files
    // (This is not working correctly, as the PathFilter class is an interface rather than a class.
    // But the 2nd arg asks me to extend the PathFilter)
    //        FileInputFormat.setInputPathFilter(job, MyPathFilter.class);
    //
    //        FileInputFormat.setInputPaths(job, new Path(inputPathStr));
    FileInputFormat.setInputPaths(job, sb.toString());
    FileOutputFormat.setOutputPath(job, new Path(outputPathStr));

    boolean success = job.waitForCompletion(true);
    return success ? 0 : 1;
  }
Ejemplo n.º 5
0
  @Override
  public final void run() {
    try {

      // before preparing the job localize
      // all the archives
      TaskAttemptID taskid = t.getTaskID();
      LocalDirAllocator lDirAlloc = new LocalDirAllocator("mapred.local.dir");
      File jobCacheDir = null;
      if (conf.getJar() != null) {
        jobCacheDir = new File(new Path(conf.getJar()).getParent().toString());
      }
      File workDir =
          new File(
              lDirAlloc
                  .getLocalPathToRead(
                      TaskTracker.getJobCacheSubdir()
                          + Path.SEPARATOR
                          + t.getJobID()
                          + Path.SEPARATOR
                          + t.getTaskID()
                          + Path.SEPARATOR
                          + MRConstants.WORKDIR,
                      conf)
                  .toString());

      URI[] archives = DistributedCache.getCacheArchives(conf);
      URI[] files = DistributedCache.getCacheFiles(conf);
      FileStatus fileStatus;
      FileSystem fileSystem;
      Path localPath;
      String baseDir;

      if ((archives != null) || (files != null)) {
        if (archives != null) {
          String[] archivesTimestamps = DistributedCache.getArchiveTimestamps(conf);
          Path[] p = new Path[archives.length];
          for (int i = 0; i < archives.length; i++) {
            fileSystem = FileSystem.get(archives[i], conf);
            fileStatus = fileSystem.getFileStatus(new Path(archives[i].getPath()));
            String cacheId = DistributedCache.makeRelative(archives[i], conf);
            String cachePath = TaskTracker.getCacheSubdir() + Path.SEPARATOR + cacheId;
            if (lDirAlloc.ifExists(cachePath, conf)) {
              localPath = lDirAlloc.getLocalPathToRead(cachePath, conf);
            } else {
              localPath = lDirAlloc.getLocalPathForWrite(cachePath, fileStatus.getLen(), conf);
            }
            baseDir = localPath.toString().replace(cacheId, "");
            p[i] =
                DistributedCache.getLocalCache(
                    archives[i],
                    conf,
                    new Path(baseDir),
                    fileStatus,
                    true,
                    Long.parseLong(archivesTimestamps[i]),
                    new Path(workDir.getAbsolutePath()),
                    false);
          }
          DistributedCache.setLocalArchives(conf, stringifyPathArray(p));
        }
        if ((files != null)) {
          String[] fileTimestamps = DistributedCache.getFileTimestamps(conf);
          Path[] p = new Path[files.length];
          for (int i = 0; i < files.length; i++) {
            fileSystem = FileSystem.get(files[i], conf);
            fileStatus = fileSystem.getFileStatus(new Path(files[i].getPath()));
            String cacheId = DistributedCache.makeRelative(files[i], conf);
            String cachePath = TaskTracker.getCacheSubdir() + Path.SEPARATOR + cacheId;
            if (lDirAlloc.ifExists(cachePath, conf)) {
              localPath = lDirAlloc.getLocalPathToRead(cachePath, conf);
            } else {
              localPath = lDirAlloc.getLocalPathForWrite(cachePath, fileStatus.getLen(), conf);
            }
            baseDir = localPath.toString().replace(cacheId, "");
            p[i] =
                DistributedCache.getLocalCache(
                    files[i],
                    conf,
                    new Path(baseDir),
                    fileStatus,
                    false,
                    Long.parseLong(fileTimestamps[i]),
                    new Path(workDir.getAbsolutePath()),
                    false);
          }
          DistributedCache.setLocalFiles(conf, stringifyPathArray(p));
        }
        Path localTaskFile = new Path(t.getJobFile());
        FileSystem localFs = FileSystem.getLocal(conf);
        localFs.delete(localTaskFile, true);
        OutputStream out = localFs.create(localTaskFile);
        try {
          conf.writeXml(out);
        } finally {
          out.close();
        }
      }

      if (!prepare()) {
        return;
      }

      String sep = System.getProperty("path.separator");
      StringBuffer classPath = new StringBuffer();
      // start with same classpath as parent process
      classPath.append(System.getProperty("java.class.path"));
      classPath.append(sep);
      if (!workDir.mkdirs()) {
        if (!workDir.isDirectory()) {
          LOG.fatal("Mkdirs failed to create " + workDir.toString());
        }
      }

      String jar = conf.getJar();
      if (jar != null) {
        // if jar exists, it into workDir
        File[] libs = new File(jobCacheDir, "lib").listFiles();
        if (libs != null) {
          for (int i = 0; i < libs.length; i++) {
            classPath.append(sep); // add libs from jar to classpath
            classPath.append(libs[i]);
          }
        }
        classPath.append(sep);
        classPath.append(new File(jobCacheDir, "classes"));
        classPath.append(sep);
        classPath.append(jobCacheDir);
      }

      // include the user specified classpath

      // archive paths
      Path[] archiveClasspaths = DistributedCache.getArchiveClassPaths(conf);
      if (archiveClasspaths != null && archives != null) {
        Path[] localArchives = DistributedCache.getLocalCacheArchives(conf);
        if (localArchives != null) {
          for (int i = 0; i < archives.length; i++) {
            for (int j = 0; j < archiveClasspaths.length; j++) {
              if (archives[i].getPath().equals(archiveClasspaths[j].toString())) {
                classPath.append(sep);
                classPath.append(localArchives[i].toString());
              }
            }
          }
        }
      }
      // file paths
      Path[] fileClasspaths = DistributedCache.getFileClassPaths(conf);
      if (fileClasspaths != null && files != null) {
        Path[] localFiles = DistributedCache.getLocalCacheFiles(conf);
        if (localFiles != null) {
          for (int i = 0; i < files.length; i++) {
            for (int j = 0; j < fileClasspaths.length; j++) {
              if (files[i].getPath().equals(fileClasspaths[j].toString())) {
                classPath.append(sep);
                classPath.append(localFiles[i].toString());
              }
            }
          }
        }
      }

      classPath.append(sep);
      classPath.append(workDir);
      //  Build exec child jmv args.
      Vector<String> vargs = new Vector<String>(8);
      File jvm = // use same jvm as parent
          new File(new File(System.getProperty("java.home"), "bin"), "java");

      vargs.add(jvm.toString());

      // Add child (task) java-vm options.
      //
      // The following symbols if present in mapred.child.java.opts value are
      // replaced:
      // + @taskid@ is interpolated with value of TaskID.
      // Other occurrences of @ will not be altered.
      //
      // Example with multiple arguments and substitutions, showing
      // jvm GC logging, and start of a passwordless JVM JMX agent so can
      // connect with jconsole and the likes to watch child memory, threads
      // and get thread dumps.
      //
      //  <property>
      //    <name>mapred.child.java.opts</name>
      //    <value>-verbose:gc -Xloggc:/tmp/@[email protected] \
      //           -Dcom.sun.management.jmxremote.authenticate=false \
      //           -Dcom.sun.management.jmxremote.ssl=false \
      //    </value>
      //  </property>
      //
      String javaOpts = conf.get("mapred.child.java.opts", "-Xmx200m");
      javaOpts = javaOpts.replace("@taskid@", taskid.toString());
      String[] javaOptsSplit = javaOpts.split(" ");

      // Add java.library.path; necessary for loading native libraries.
      //
      // 1. To support native-hadoop library i.e. libhadoop.so, we add the
      //    parent processes' java.library.path to the child.
      // 2. We also add the 'cwd' of the task to it's java.library.path to help
      //    users distribute native libraries via the DistributedCache.
      // 3. The user can also specify extra paths to be added to the
      //    java.library.path via mapred.child.java.opts.
      //
      String libraryPath = System.getProperty("java.library.path");
      if (libraryPath == null) {
        libraryPath = workDir.getAbsolutePath();
      } else {
        libraryPath += sep + workDir;
      }
      boolean hasUserLDPath = false;
      for (int i = 0; i < javaOptsSplit.length; i++) {
        if (javaOptsSplit[i].startsWith("-Djava.library.path=")) {
          javaOptsSplit[i] += sep + libraryPath;
          hasUserLDPath = true;
          break;
        }
      }
      if (!hasUserLDPath) {
        vargs.add("-Djava.library.path=" + libraryPath);
      }
      for (int i = 0; i < javaOptsSplit.length; i++) {
        vargs.add(javaOptsSplit[i]);
      }

      // add java.io.tmpdir given by mapred.child.tmp
      String tmp = conf.get("mapred.child.tmp", "./tmp");
      Path tmpDir = new Path(tmp);

      // if temp directory path is not absolute
      // prepend it with workDir.
      if (!tmpDir.isAbsolute()) {
        tmpDir = new Path(workDir.toString(), tmp);
      }
      FileSystem localFs = FileSystem.getLocal(conf);
      if (!localFs.mkdirs(tmpDir) && !localFs.getFileStatus(tmpDir).isDir()) {
        throw new IOException("Mkdirs failed to create " + tmpDir.toString());
      }
      vargs.add("-Djava.io.tmpdir=" + tmpDir.toString());

      // Add classpath.
      vargs.add("-classpath");
      vargs.add(classPath.toString());

      // Setup the log4j prop
      long logSize = TaskLog.getTaskLogLength(conf);
      vargs.add(
          "-Dhadoop.log.dir=" + new File(System.getProperty("hadoop.log.dir")).getAbsolutePath());
      vargs.add("-Dhadoop.root.logger=INFO,TLA");
      vargs.add("-Dhadoop.tasklog.taskid=" + taskid);
      vargs.add("-Dhadoop.tasklog.totalLogFileSize=" + logSize);

      if (conf.getProfileEnabled()) {
        if (conf.getProfileTaskRange(t.isMapTask()).isIncluded(t.getPartition())) {
          File prof = TaskLog.getTaskLogFile(taskid, TaskLog.LogName.PROFILE);
          vargs.add(String.format(conf.getProfileParams(), prof.toString()));
        }
      }

      // Add main class and its arguments
      vargs.add(Child.class.getName()); // main of Child
      // pass umbilical address
      InetSocketAddress address = tracker.getTaskTrackerReportAddress();
      vargs.add(address.getAddress().getHostAddress());
      vargs.add(Integer.toString(address.getPort()));
      vargs.add(taskid.toString()); // pass task identifier

      String pidFile = null;
      if (tracker.isTaskMemoryManagerEnabled()) {
        pidFile =
            lDirAlloc
                .getLocalPathForWrite(
                    (TaskTracker.getPidFilesSubdir() + Path.SEPARATOR + taskid), this.conf)
                .toString();
      }

      // set memory limit using ulimit if feasible and necessary ...
      String[] ulimitCmd = Shell.getUlimitMemoryCommand(conf);
      List<String> setup = null;
      if (ulimitCmd != null) {
        setup = new ArrayList<String>();
        for (String arg : ulimitCmd) {
          setup.add(arg);
        }
      }

      // Set up the redirection of the task's stdout and stderr streams
      File stdout = TaskLog.getTaskLogFile(taskid, TaskLog.LogName.STDOUT);
      File stderr = TaskLog.getTaskLogFile(taskid, TaskLog.LogName.STDERR);
      stdout.getParentFile().mkdirs();
      tracker.getTaskTrackerInstrumentation().reportTaskLaunch(taskid, stdout, stderr);

      Map<String, String> env = new HashMap<String, String>();
      StringBuffer ldLibraryPath = new StringBuffer();
      ldLibraryPath.append(workDir.toString());
      String oldLdLibraryPath = null;
      oldLdLibraryPath = System.getenv("LD_LIBRARY_PATH");
      if (oldLdLibraryPath != null) {
        ldLibraryPath.append(sep);
        ldLibraryPath.append(oldLdLibraryPath);
      }
      env.put("LD_LIBRARY_PATH", ldLibraryPath.toString());
      jvmManager.launchJvm(
          this,
          jvmManager.constructJvmEnv(
              setup, vargs, stdout, stderr, logSize, workDir, env, pidFile, conf));
      synchronized (lock) {
        while (!done) {
          lock.wait();
        }
      }
      tracker.getTaskTrackerInstrumentation().reportTaskEnd(t.getTaskID());
      if (exitCodeSet) {
        if (!killed && exitCode != 0) {
          if (exitCode == 65) {
            tracker.getTaskTrackerInstrumentation().taskFailedPing(t.getTaskID());
          }
          throw new IOException("Task process exit with nonzero status of " + exitCode + ".");
        }
      }
    } catch (FSError e) {
      LOG.fatal("FSError", e);
      try {
        tracker.fsError(t.getTaskID(), e.getMessage());
      } catch (IOException ie) {
        LOG.fatal(t.getTaskID() + " reporting FSError", ie);
      }
    } catch (Throwable throwable) {
      LOG.warn(t.getTaskID() + " Child Error", throwable);
      ByteArrayOutputStream baos = new ByteArrayOutputStream();
      throwable.printStackTrace(new PrintStream(baos));
      try {
        tracker.reportDiagnosticInfo(t.getTaskID(), baos.toString());
      } catch (IOException e) {
        LOG.warn(t.getTaskID() + " Reporting Diagnostics", e);
      }
    } finally {
      try {
        URI[] archives = DistributedCache.getCacheArchives(conf);
        URI[] files = DistributedCache.getCacheFiles(conf);
        if (archives != null) {
          for (int i = 0; i < archives.length; i++) {
            DistributedCache.releaseCache(archives[i], conf);
          }
        }
        if (files != null) {
          for (int i = 0; i < files.length; i++) {
            DistributedCache.releaseCache(files[i], conf);
          }
        }
      } catch (IOException ie) {
        LOG.warn("Error releasing caches : Cache files might not have been cleaned up");
      }
      tracker.reportTaskFinished(t.getTaskID(), false);
      if (t.isMapTask()) {
        tracker.addFreeMapSlot();
      } else {
        tracker.addFreeReduceSlot();
      }
    }
  }