/**
* Checks if the two entries represent the same publication.
*
* @param one BibEntry
* @param two BibEntry
* @return boolean
*/
public static boolean isDuplicate(BibEntry one, BibEntry two, BibDatabaseMode bibDatabaseMode) {
// First check if they are of the same type - a necessary condition:
if (!one.getType().equals(two.getType())) {
return false;
}
EntryType type = EntryTypes.getTypeOrDefault(one.getType(), bibDatabaseMode);
// The check if they have the same required fields:
java.util.List<String> var = type.getRequiredFieldsFlat();
String[] fields = var.toArray(new String[var.size()]);
double[] req;
if (fields == null) {
req = new double[] {0., 0.};
} else {
req = DuplicateCheck.compareFieldSet(fields, one, two);
}
if (Math.abs(req[0] - DuplicateCheck.duplicateThreshold) > DuplicateCheck.DOUBT_RANGE) {
// Far from the threshold value, so we base our decision on the req. fields only
return req[0] >= DuplicateCheck.duplicateThreshold;
}
// Close to the threshold value, so we take a look at the optional fields, if any:
java.util.List<String> optionalFields = type.getOptionalFields();
fields = optionalFields.toArray(new String[optionalFields.size()]);
if (fields != null) {
double[] opt = DuplicateCheck.compareFieldSet(fields, one, two);
double totValue =
((DuplicateCheck.REQUIRED_WEIGHT * req[0] * req[1]) + (opt[0] * opt[1]))
/ ((req[1] * DuplicateCheck.REQUIRED_WEIGHT) + opt[1]);
return totValue >= DuplicateCheck.duplicateThreshold;
}
return req[0] >= DuplicateCheck.duplicateThreshold;
}
private Optional<BibEntry> createNewEntry() {
// Find out what type is desired
EntryTypeDialog etd = new EntryTypeDialog(frame);
// We want to center the dialog, to make it look nicer.
etd.setLocationRelativeTo(frame);
etd.setVisible(true);
EntryType type = etd.getChoice();
if (type != null) { // Only if the dialog was not canceled.
String id = IdGenerator.next();
final BibEntry bibEntry = new BibEntry(id, type.getName());
try {
panel.getDatabase().insertEntry(bibEntry);
// Set owner/timestamp if options are enabled:
List<BibEntry> list = new ArrayList<>();
list.add(bibEntry);
UpdateField.setAutomaticFields(list, true, true, Globals.prefs.getUpdateFieldPreferences());
// Create an UndoableInsertEntry object.
panel
.getUndoManager()
.addEdit(new UndoableInsertEntry(panel.getDatabase(), bibEntry, panel));
panel.output(
Localization.lang("Added new")
+ " '"
+ type.getName().toLowerCase()
+ "' "
+ Localization.lang("entry")
+ ".");
// We are going to select the new entry. Before that, make sure that we are in
// show-entry mode. If we aren't already in that mode, enter the WILL_SHOW_EDITOR
// mode which makes sure the selection will trigger display of the entry editor
// and adjustment of the splitter.
if (panel.getMode() != BasePanelMode.SHOWING_EDITOR) {
panel.setMode(BasePanelMode.WILL_SHOW_EDITOR);
}
SwingUtilities.invokeLater(() -> panel.showEntry(bibEntry));
// The database just changed.
panel.markBaseChanged();
return Optional.of(bibEntry);
} catch (KeyCollisionException ex) {
LOGGER.info("Key collision occurred", ex);
}
}
return Optional.empty();
}
private JTextField addEntryType(Container c, EntryType type, int y) {
JLabel lab = new JLabel(type.getName());
con.gridx = 0;
con.gridy = y;
con.fill = GridBagConstraints.BOTH;
con.weightx = 0;
con.weighty = 0;
con.anchor = GridBagConstraints.WEST;
con.insets = new Insets(0, 5, 0, 5);
gbl.setConstraints(lab, con);
c.add(lab);
JTextField tf = new JTextField();
tf.setColumns(15);
con.gridx = 1;
con.fill = GridBagConstraints.HORIZONTAL;
con.weightx = 1;
con.weighty = 0;
con.anchor = GridBagConstraints.CENTER;
con.insets = new Insets(0, 5, 0, 5);
gbl.setConstraints(tf, con);
c.add(tf);
JButton but = new JButton(Localization.lang("Default"));
con.gridx = 2;
con.fill = GridBagConstraints.BOTH;
con.weightx = 0;
con.weighty = 0;
con.anchor = GridBagConstraints.CENTER;
con.insets = new Insets(0, 5, 0, 5);
gbl.setConstraints(but, con);
but.setActionCommand(type.getName().toLowerCase());
but.addActionListener(
e -> {
JTextField tField = textFields.get(e.getActionCommand());
tField.setText("");
});
c.add(but);
return tf;
}
private void buildGUI() {
JPanel pan = new JPanel();
JScrollPane sp = new JScrollPane(pan);
sp.setPreferredSize(new Dimension(100, 100));
sp.setBorder(BorderFactory.createEmptyBorder());
pan.setLayout(gbl);
setLayout(gbl);
// The header - can be removed
JLabel lblEntryType = new JLabel(Localization.lang("Entry type"));
Font f = new Font("plain", Font.BOLD, 12);
lblEntryType.setFont(f);
con.gridx = 0;
con.gridy = 0;
con.gridwidth = 1;
con.gridheight = 1;
con.fill = GridBagConstraints.VERTICAL;
con.anchor = GridBagConstraints.WEST;
con.insets = new Insets(5, 5, 10, 0);
gbl.setConstraints(lblEntryType, con);
pan.add(lblEntryType);
JLabel lblKeyPattern = new JLabel(Localization.lang("Key pattern"));
lblKeyPattern.setFont(f);
con.gridx = 1;
con.gridy = 0;
con.gridheight = 1;
con.fill = GridBagConstraints.HORIZONTAL;
con.anchor = GridBagConstraints.WEST;
con.insets = new Insets(5, 5, 10, 5);
gbl.setConstraints(lblKeyPattern, con);
pan.add(lblKeyPattern);
con.gridy = 1;
con.gridx = 0;
JLabel lab = new JLabel(Localization.lang("Default pattern"));
gbl.setConstraints(lab, con);
pan.add(lab);
con.gridx = 1;
gbl.setConstraints(defaultPat, con);
pan.add(defaultPat);
con.insets = new Insets(5, 5, 10, 5);
JButton btnDefault = new JButton(Localization.lang("Default"));
btnDefault.addActionListener(
e ->
defaultPat.setText(
(String) Globals.prefs.defaults.get(JabRefPreferences.DEFAULT_BIBTEX_KEY_PATTERN)));
con.gridx = 2;
int y = 2;
gbl.setConstraints(btnDefault, con);
pan.add(btnDefault);
BibDatabaseMode mode;
// check mode of currently used DB
if (panel != null) {
mode = panel.getBibDatabaseContext().getMode();
} else {
// use preferences value if no DB is open
mode = Globals.prefs.getDefaultBibDatabaseMode();
}
for (EntryType type : EntryTypes.getAllValues(mode)) {
textFields.put(type.getName().toLowerCase(), addEntryType(pan, type, y));
y++;
}
con.fill = GridBagConstraints.BOTH;
con.gridx = 0;
con.gridy = 1;
con.gridwidth = 3;
con.weightx = 1;
con.weighty = 1;
gbl.setConstraints(sp, con);
add(sp);
// A help button
con.gridwidth = 1;
con.gridx = 1;
con.gridy = 2;
con.fill = GridBagConstraints.HORIZONTAL;
//
con.weightx = 0;
con.weighty = 0;
con.anchor = GridBagConstraints.SOUTHEAST;
con.insets = new Insets(0, 5, 0, 5);
JButton hlb = new JButton(IconTheme.JabRefIcon.HELP.getSmallIcon());
hlb.setToolTipText(Localization.lang("Help on key patterns"));
gbl.setConstraints(hlb, con);
add(hlb);
hlb.addActionListener(help);
// And finally a button to reset everything
JButton btnDefaultAll = new JButton(Localization.lang("Reset all"));
con.gridx = 2;
con.gridy = 2;
con.weightx = 1;
con.weighty = 0;
con.anchor = GridBagConstraints.SOUTHEAST;
con.insets = new Insets(20, 5, 0, 5);
gbl.setConstraints(btnDefaultAll, con);
btnDefaultAll.addActionListener(
e -> {
// reset all fields
for (JTextField field : textFields.values()) {
field.setText("");
}
// also reset the default pattern
defaultPat.setText(
(String) Globals.prefs.defaults.get(JabRefPreferences.DEFAULT_BIBTEX_KEY_PATTERN));
});
add(btnDefaultAll);
}
/** Main function for building the merge entry JPanel */
private void initialize() {
joint = new TreeSet<>(one.getFieldNames());
joint.addAll(two.getFieldNames());
// Remove field starting with __
TreeSet<String> toberemoved = new TreeSet<>();
for (String field : joint) {
if (field.startsWith("__")) {
toberemoved.add(field);
}
}
for (String field : toberemoved) {
joint.remove(field);
}
// Create storage arrays
rb = new JRadioButton[3][joint.size() + 1];
ButtonGroup[] rbg = new ButtonGroup[joint.size() + 1];
identical = new Boolean[joint.size() + 1];
jointStrings = new String[joint.size()];
// Create main layout
String colSpecMain =
"left:pref, 5px, center:3cm:grow, 5px, center:pref, 3px, center:pref, 3px, center:pref, 5px, center:3cm:grow";
String colSpecMerge =
"left:pref, 5px, fill:3cm:grow, 5px, center:pref, 3px, center:pref, 3px, center:pref, 5px, fill:3cm:grow";
String rowSpec = "pref, pref, 10px, fill:5cm:grow, 10px, pref, 10px, fill:3cm:grow";
StringBuilder rowBuilder = new StringBuilder("");
for (int i = 0; i < joint.size(); i++) {
rowBuilder.append("pref, ");
}
rowBuilder.append("pref");
FormLayout mainLayout = new FormLayout(colSpecMain, rowSpec);
FormLayout mergeLayout = new FormLayout(colSpecMerge, rowBuilder.toString());
mainPanel.setLayout(mainLayout);
mergePanel.setLayout(mergeLayout);
JLabel label = new JLabel(Localization.lang("Use"));
Font font = label.getFont();
label.setFont(font.deriveFont(font.getStyle() | Font.BOLD));
mainPanel.add(label, cc.xyw(4, 1, 7, "center, bottom"));
// Set headings
JLabel headingLabels[] = new JLabel[6];
for (int i = 0; i < 6; i++) {
headingLabels[i] = new JLabel(columnHeadings[i]);
font = headingLabels[i].getFont();
headingLabels[i].setFont(font.deriveFont(font.getStyle() | Font.BOLD));
mainPanel.add(headingLabels[i], cc.xy(1 + (i * 2), 2));
}
mainPanel.add(new JSeparator(), cc.xyw(1, 3, 11));
// Start with entry type
EntryType type1 = one.getType();
EntryType type2 = two.getType();
mergedEntry.setType(type1);
label = new JLabel(Localization.lang("Entry type"));
font = label.getFont();
label.setFont(font.deriveFont(font.getStyle() | Font.BOLD));
mergePanel.add(label, cc.xy(1, 1));
JTextArea type1ta = new JTextArea(type1.getName());
type1ta.setEditable(false);
mergePanel.add(type1ta, cc.xy(3, 1));
if (type1.compareTo(type2) != 0) {
identical[0] = false;
rbg[0] = new ButtonGroup();
for (int k = 0; k < 3; k += 2) {
rb[k][0] = new JRadioButton();
rbg[0].add(rb[k][0]);
mergePanel.add(rb[k][0], cc.xy(5 + (k * 2), 1));
rb[k][0].addChangeListener(
new ChangeListener() {
@Override
public void stateChanged(ChangeEvent e) {
updateAll();
}
});
}
rb[0][0].setSelected(true);
} else {
identical[0] = true;
}
JTextArea type2ta = new JTextArea(type2.getName());
type2ta.setEditable(false);
mergePanel.add(type2ta, cc.xy(11, 1));
// For all fields in joint add a row and possibly radio buttons
int row = 2;
int maxLabelWidth = -1;
int tmpLabelWidth = 0;
for (String field : joint) {
jointStrings[row - 2] = field;
label = new JLabel(CaseChangers.UPPER_FIRST.format(field));
font = label.getFont();
label.setFont(font.deriveFont(font.getStyle() | Font.BOLD));
mergePanel.add(label, cc.xy(1, row));
String string1 = one.getField(field);
String string2 = two.getField(field);
identical[row - 1] = false;
if ((string1 != null) && (string2 != null)) {
if (string1.equals(string2)) {
identical[row - 1] = true;
}
}
tmpLabelWidth = label.getPreferredSize().width;
if (tmpLabelWidth > maxLabelWidth) {
maxLabelWidth = tmpLabelWidth;
}
if ("abstract".equals(field) || "review".equals(field)) {
// Treat the abstract and review fields special
JTextArea tf = new JTextArea();
tf.setLineWrap(true);
tf.setEditable(false);
JScrollPane jsptf = new JScrollPane(tf);
mergeLayout.setRowSpec(row, RowSpec.decode("center:2cm:grow"));
mergePanel.add(jsptf, cc.xy(3, row, "f, f"));
tf.setText(string1);
tf.setCaretPosition(0);
} else {
JTextArea tf = new JTextArea(string1);
mergePanel.add(tf, cc.xy(3, row));
tf.setCaretPosition(0);
tf.setEditable(false);
}
// Add radio buttons if the two entries do not have identical fields
if (!identical[row - 1]) {
rbg[row - 1] = new ButtonGroup();
for (int k = 0; k < 3; k++) {
rb[k][row - 1] = new JRadioButton();
rbg[row - 1].add(rb[k][row - 1]);
mergePanel.add(rb[k][row - 1], cc.xy(5 + (k * 2), row));
rb[k][row - 1].addChangeListener(
new ChangeListener() {
@Override
public void stateChanged(ChangeEvent e) {
updateAll();
}
});
}
if (string1 != null) {
mergedEntry.setField(field, string1);
rb[0][row - 1].setSelected(true);
if (string2 == null) {
rb[2][row - 1].setEnabled(false);
}
} else {
rb[0][row - 1].setEnabled(false);
mergedEntry.setField(field, string2);
rb[2][row - 1].setSelected(true);
}
} else {
mergedEntry.setField(field, string1);
}
if ("abstract".equals(field) || "review".equals(field)) {
// Again, treat abstract and review special
JTextArea tf = new JTextArea();
tf.setLineWrap(true);
tf.setEditable(false);
JScrollPane jsptf = new JScrollPane(tf);
mergePanel.add(jsptf, cc.xy(11, row, "f, f"));
tf.setText(string2);
tf.setCaretPosition(0);
} else {
JTextArea tf = new JTextArea(string2);
mergePanel.add(tf, cc.xy(11, row));
tf.setCaretPosition(0);
tf.setEditable(false);
}
row++;
}
JScrollPane scrollPane =
new JScrollPane(
mergePanel,
JScrollPane.VERTICAL_SCROLLBAR_AS_NEEDED,
JScrollPane.HORIZONTAL_SCROLLBAR_NEVER);
scrollPane.setBorder(BorderFactory.createEmptyBorder());
mainPanel.add(scrollPane, cc.xyw(1, 4, 11));
mainPanel.add(new JSeparator(), cc.xyw(1, 5, 11));
// Synchronize column widths
String rbAlign[] = {"right", "center", "left"};
mainLayout.setColumnSpec(1, ColumnSpec.decode(Integer.toString(maxLabelWidth) + "px"));
Integer maxRBWidth = -1;
Integer tmpRBWidth;
for (int k = 0; k < 3; k++) {
tmpRBWidth = headingLabels[k + 2].getPreferredSize().width;
if (tmpRBWidth > maxRBWidth) {
maxRBWidth = tmpRBWidth;
}
}
for (int k = 0; k < 3; k++) {
mergeLayout.setColumnSpec(
5 + (k * 2), ColumnSpec.decode(rbAlign[k] + ":" + maxRBWidth + "px"));
}
// Setup a PreviewPanel and a Bibtex source box for the merged entry
label = new JLabel(Localization.lang("Merged entry"));
font = label.getFont();
label.setFont(font.deriveFont(font.getStyle() | Font.BOLD));
mainPanel.add(label, cc.xyw(1, 6, 6));
String layoutString = Globals.prefs.get(JabRefPreferences.PREVIEW_0);
pp = new PreviewPanel(null, mergedEntry, null, new MetaData(), layoutString);
// JScrollPane jsppp = new JScrollPane(pp, JScrollPane.VERTICAL_SCROLLBAR_AS_NEEDED,
// JScrollPane.HORIZONTAL_SCROLLBAR_NEVER);
mainPanel.add(pp, cc.xyw(1, 8, 6));
label = new JLabel(Localization.lang("Merged BibTeX source code"));
font = label.getFont();
label.setFont(font.deriveFont(font.getStyle() | Font.BOLD));
mainPanel.add(label, cc.xyw(8, 6, 4));
jta = new JTextArea();
jta.setLineWrap(true);
JScrollPane jspta = new JScrollPane(jta);
mainPanel.add(jspta, cc.xyw(8, 8, 4));
jta.setEditable(false);
StringWriter sw = new StringWriter();
try {
new BibtexEntryWriter(new LatexFieldFormatter(), false).write(mergedEntry, sw);
} catch (IOException ex) {
LOGGER.error("Error in entry" + ": " + ex.getMessage(), ex);
}
jta.setText(sw.getBuffer().toString());
jta.setCaretPosition(0);
// Add some margin around the layout
mainLayout.appendRow(RowSpec.decode("10px"));
mainLayout.appendColumn(ColumnSpec.decode("10px"));
mainLayout.insertRow(1, RowSpec.decode("10px"));
mainLayout.insertColumn(1, ColumnSpec.decode("10px"));
if (mainPanel.getHeight() > DIM.height) {
mainPanel.setSize(new Dimension(mergePanel.getWidth(), DIM.height));
}
if (mainPanel.getWidth() > DIM.width) {
mainPanel.setSize(new Dimension(DIM.width, mergePanel.getHeight()));
}
// Everything done, allow any action to actually update the merged entry
doneBuilding = true;
// Show what we've got
mainPanel.setVisible(true);
javax.swing.SwingUtilities.invokeLater(
new Runnable() {
@Override
public void run() {
scrollPane.getVerticalScrollBar().setValue(0);
}
});
}
public ChangeTypeAction(EntryType type, BasePanel bp) {
super(type.getName());
this.type = type.getName();
panel = bp;
}