private void init(final H5Group h5Group) {
shortName = h5Group.getName();
originalName = getName();
List<HObject> members = h5Group.getMemberList();
if (members != null) {
for (HObject hObject : members) {
if (hObject instanceof H5ScalarDS) {
H5ScalarDS scalarDS = (H5ScalarDS) hObject;
HdfDataItem dataItem = new HdfDataItem(factoryName, dataset.getH5File(), this, scalarDS);
itemMap.put(scalarDS.getName(), dataItem);
}
if (hObject instanceof H5Group) {
H5Group group = (H5Group) hObject;
HdfGroup hdfGroup = new HdfGroup(factoryName, group, this, dataset);
groupMap.put(group.getName(), hdfGroup);
}
}
try {
@SuppressWarnings("unchecked")
List<Metadata> metadatas = h5Group.getMetadata();
for (Metadata metadata : metadatas) {
if (metadata instanceof Attribute) {
Attribute attribute = (Attribute) metadata;
HdfAttribute hdfAttr = new HdfAttribute(factoryName, attribute);
attributeMap.put(hdfAttr.getName(), hdfAttr);
}
}
} catch (HDF5Exception e) {
Factory.getLogger().severe(e.getMessage());
}
}
}
/** Closes the HDF5 file. Function usefull only because of the try/catch */
public static void hdf5_close(H5File h5) {
try {
h5.close();
} catch (HDF5Exception ex) {
System.out.println("Could not close HDF5 file?");
ex.printStackTrace();
}
}
private String createErrorMessage(HDF5Exception e) {
return "HDF library error: " + e.getMessage();
}