private void activateRightSideButtons() {
colorPyrpur.setOnAction(
(me) -> {
((MeshModel) rnaSequence3D.getModels().get(1)).colorPyrPur();
});
colorAugc.setOnAction(
(me) -> {
((MeshModel) rnaSequence3D.getModels().get(1)).colorBases();
});
centerObject.setOnAction(
(me) -> {
tertiaryRoom.setCameraCenter(rnaSequence3D.computeCenter());
});
}
private void loadAllmodels() {
rnaSequence3D.addModel(new StickModel());
rnaSequence3D.addModel(new MeshModel());
rnaSequence3D.addModel(new BallModel());
structureStick.selectedProperty().unbind();
structureMesh.selectedProperty().unbind();
structureBall.selectedProperty().unbind();
rnaSequence3D.getModels().get(0).visibleProperty().bind(structureStick.selectedProperty());
rnaSequence3D.getModels().get(1).visibleProperty().bind(structureMesh.selectedProperty());
rnaSequence3D.getModels().get(2).visibleProperty().bind(structureBall.selectedProperty());
tertiaryRoom.getObject().getChildren().addAll(rnaSequence3D.getModels().get(0));
tertiaryRoom.getObject().getChildren().addAll(rnaSequence3D.getModels().get(1));
tertiaryRoom.getObject().getChildren().addAll(rnaSequence3D.getModels().get(2));
}
private void clearModels() {
structureStick.selectedProperty().unbind();
structureBall.selectedProperty().unbind();
structureMesh.selectedProperty().unbind();
structureBall.setOnAction(event -> {});
rnaSequence3D.getModels().clear();
}
private void loadOneModel(int model) {
switch (model) {
case 0:
rnaSequence3D.addModel(new StickModel());
break;
case 1:
rnaSequence3D.addModel(new MeshModel());
break;
case 2:
rnaSequence3D.addModel(new BallModel());
break;
}
tertiaryRoom.getObject().getChildren().addAll(rnaSequence3D.getModels().get(0));
}
/** initialize tertiary structure view */
private void initTertiaryView() {
Group models3D = new Group();
rnaSequence3D = new RNASequence(model.getPdbfile());
if (tertiaryRoom == null) {
tertiaryRoom = new Room(models3D, 50, 50);
tertiaryRoom.rotateCamera(tertiaryRoom);
tertiaryRoom.scaleCamera(scene);
tertiaryRoom.alignToParent(pane3D);
tertiaryRoom.setPickOnBounds(false);
pane3D.getChildren().add(tertiaryRoom);
} else {
tertiaryRoom.setObject(rnaSequence3D);
}
if (reloadItem.isSelected()) loadOneModel(0);
if (!reloadItem.isSelected()) loadAllmodels();
((MeshModel) rnaSequence3D.getModels().get(1)).colorPyrPur();
rnaSequence3D.setSelectionModel(selectionModel);
tertiaryRoom.setCameraCenter(rnaSequence3D.computeCenter());
activateRightSideButtons();
}
