public AbstractAlgorithmRunner(
Graph graph, Parameters params, KnowledgeBoxModel knowledgeBoxModel) {
this(graph, params);
if (knowledgeBoxModel != null) {
getParams().set("knowledge", knowledgeBoxModel.getKnowledge());
}
}
/**
* Constructs a wrapper for the given DataWrapper. The DatWrapper must contain a DataSet that is
* either a DataSet or a DataSet or a DataList containing either a DataSet or a DataSet as its
* selected model.
*
* @param knowledgeBoxModel
*/
public AbstractAlgorithmRunner(
DataWrapper dataWrapper,
Parameters params,
KnowledgeBoxModel knowledgeBoxModel,
IndependenceFactsModel facts) {
if (dataWrapper == null) {
throw new NullPointerException();
}
if (params == null) {
throw new NullPointerException();
}
this.params = params;
this.sourceGraph = dataWrapper.getSourceGraph();
DataModel dataSource = getSelectedDataModel(dataWrapper);
this.dataWrapper = dataWrapper;
// temporary workaround to get the knowledge box to coexist with the dataWrapper's knowledge
if (knowledgeBoxModel == null) {
getParams().set("knowledge", dataWrapper.getKnowledge());
} else {
getParams().set("knowledge", knowledgeBoxModel.getKnowledge());
}
getParams().set("independenceFacts", facts.getFacts());
List names = dataSource.getVariableNames();
transferVarNamesToParams(names);
}
/**
* Constructs a wrapper for the given DataWrapper. The DatWrapper must contain a DataSet that is
* either a DataSet or a DataSet or a DataList containing either a DataSet or a DataSet as its
* selected model.
*
* @param knowledgeBoxModel
*/
public AbstractAlgorithmRunner(
DataWrapper dataWrapper, Parameters params, KnowledgeBoxModel knowledgeBoxModel) {
if (dataWrapper == null) {
throw new NullPointerException();
}
if (params == null) {
throw new NullPointerException();
}
this.params = params;
this.sourceGraph = dataWrapper.getSourceGraph();
DataModelList dataSource = dataWrapper.getDataModelList();
// if (dataSource instanceof ColtDataSet) {
// dataSource = new ColtDataSet((ColtDataSet) dataSource);
// }
this.dataWrapper = dataWrapper;
// temporary workaround to get the knowledge box to coexist with the dataWrapper's knowledge
if (knowledgeBoxModel == null) {
getParams().set("knowledge", dataWrapper.getKnowledge());
} else {
getParams().set("knowledge", knowledgeBoxModel.getKnowledge());
}
List names = dataSource.getVariableNames();
transferVarNamesToParams(names);
}
public AbstractAlgorithmRunner(
Parameters params, KnowledgeBoxModel knowledgeBoxModel, Graph... graphs) {
this.graphs = Arrays.asList(graphs);
this.params = params;
if (knowledgeBoxModel != null) {
getParams().set("knowledge", knowledgeBoxModel.getKnowledge());
}
}
public AbstractAlgorithmRunner(
Graph graph,
Parameters params,
KnowledgeBoxModel knowledgeBoxModel,
IndependenceFacts facts) {
this(graph, params);
if (knowledgeBoxModel != null) {
getParams().set("knowledge", knowledgeBoxModel.getKnowledge());
}
if (facts != null) {
getParams().set("independenceFacts", facts);
}
}
public AbstractAlgorithmRunner(
IndependenceFactsModel model, Parameters params, KnowledgeBoxModel knowledgeBoxModel) {
if (model == null) {
throw new NullPointerException();
}
if (params == null) {
throw new NullPointerException();
}
this.params = params;
DataModel dataSource = model.getFacts();
if (knowledgeBoxModel != null) {
getParams().set("knowledge", knowledgeBoxModel.getKnowledge());
}
List names = dataSource.getVariableNames();
transferVarNamesToParams(names);
this.dataModel = dataSource;
}