public void saveToFile(String fileName) {
if (profiles.size() > 0) {
try {
FileWriter fout = new FileWriter(fileName);
int start = (-1 * (params.getWindowSize() / 2)) + params.getBinSize() / 2;
int step = params.getWindowSize() / params.getNumBins();
fout.write(name + "\n");
int k = start;
for (int i = 0; i < values.length; i++) {
fout.write(k + "\t" + values[i] + "\n");
k += step;
}
fout.close();
} catch (IOException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
} else {
System.err.println("Empty MetaProfile: nothing to write to file");
}
}
