JarFile get(URL url, boolean useCaches) throws IOException {
JarFile result = null;
JarFile local_result = null;
if (useCaches) {
synchronized (this) {
result = getCachedJarFile(url);
}
if (result == null) {
local_result = URLJarFile.getJarFile(url);
synchronized (this) {
result = getCachedJarFile(url);
if (result == null) {
fileCache.put(url, local_result);
urlCache.put(local_result, url);
result = local_result;
} else {
if (local_result != null) {
local_result.close();
}
}
}
}
} else {
result = URLJarFile.getJarFile(url);
}
if (result == null) throw new FileNotFoundException(url.toString());
return result;
}
// get relation sort order, or use defaults
private void loadRelationSortOrder(Element relationSortingElt) {
// use defaults if no order specified
if (relationSortingElt == null) {
for (int i = 0; i < defaultRelationSortOrder.length; i++) {
_relationIndexMap.put(defaultRelationSortOrder[i], new Integer(i));
}
return;
}
// otherwise load from 'order' attribute
String orderAttr = relationSortingElt.getAttributeValue("order");
String[] relSortOrder = orderAttr.split("\\s+");
for (int i = 0; i < relSortOrder.length; i++) {
_relationIndexMap.put(relSortOrder[i], new Integer(i));
}
}
public void run() {
String line;
String id = null;
seqs = new HashMap<String, StringBuffer>();
try {
// System.err.println("quality read start"); // debug
while (true) {
line = br.readLine();
// FIX ME: update to use reader...
if (line == null) break;
// EOF
if (line.indexOf(">") == 0) {
String[] stuff = line.substring(1).split("\\s+");
id = new String(stuff[0]);
// HACK, WRONG if line contains comments...
} else {
// sequence
StringBuffer sb = seqs.get(id);
if (sb == null) seqs.put(id, sb = new StringBuffer());
sb.append(line);
}
}
data_loaded = true;
// System.err.println("quality read end"); // debug
} catch (Exception e) {
System.err.println("FASTASequenceReader load error: " + e); // debug
System.exit(1);
}
}
/** {@inheritDoc} */
public void initializeFrom(Element element) throws DocumentSerializationException {
for (Enumeration e = element.getChildren(); e.hasMoreElements(); ) {
Element serviceElement = (TextElement) e.nextElement();
String tagName = (String) serviceElement.getKey();
if (tagName.equals("service")) {
try {
ModuleClassID moduleClassID =
(ModuleClassID)
IDFactory.fromURI(
new URI(
DocumentSerializableUtilities.getString(
serviceElement, "moduleClassID", "ERROR")));
try {
ServiceMonitorFilter serviceMonitorFilter =
MonitorResources.createServiceMonitorFilter(moduleClassID);
serviceMonitorFilter.init(moduleClassID);
Element serviceMonitorFilterElement =
DocumentSerializableUtilities.getChildElement(serviceElement, "serviceFilter");
serviceMonitorFilter.initializeFrom(serviceMonitorFilterElement);
serviceMonitorFilters.put(moduleClassID, serviceMonitorFilter);
} catch (Exception ex) {
if (unknownModuleClassIDs == null) unknownModuleClassIDs = new LinkedList();
unknownModuleClassIDs.add(moduleClassID);
}
} catch (URISyntaxException jex) {
throw new DocumentSerializationException("Can't get ModuleClassID", jex);
}
}
}
}
/**
* Returns an icon for the specified file.
*
* @param file file reference
* @return icon
*/
public static Icon file(final IOFile file) {
if (file == null) return UNKNOWN;
// fallback code for displaying icons
final String path = file.path();
final MediaType type = MediaType.get(path);
if (type.isXML()) return XML;
if (type.isXQuery()) return XQUERY;
if (path.contains(IO.BASEXSUFFIX)) return BASEX;
// only works with standard dpi (https://bugs.openjdk.java.net/browse/JDK-6817929)
if (Prop.WIN && !GUIConstants.large()) {
// retrieve system icons (only supported on Windows)
final int p = path.lastIndexOf(path, '.');
final String suffix = p == -1 ? null : path.substring(p + 1);
Icon icon = null;
if (suffix != null) icon = FILES.get(suffix);
if (icon == null) {
icon = FS.getSystemIcon(file.file());
if (suffix != null) FILES.put(suffix, icon);
}
return icon;
}
// default icon chooser
return type.isText() ? TEXT : UNKNOWN;
}
/**
* Returns the specified image as icon.
*
* @param name name of icon
* @return icon
*/
public static ImageIcon icon(final String name) {
ImageIcon ii = ICONS.get(name);
if (ii != null) return ii;
Image img;
if (GUIConstants.scale > 1) {
// choose large image or none
final URL url =
GUIConstants.large() ? BaseXImages.class.getResource("/img/" + name + "_32.png") : null;
if (url == null) {
// resize low-res image if no hi-res image exists
img = get(url(name));
final int w = (int) (img.getWidth(null) * GUIConstants.scale);
final int h = (int) (img.getHeight(null) * GUIConstants.scale);
final BufferedImage tmp = new BufferedImage(w, h, BufferedImage.TYPE_INT_ARGB);
final Graphics2D g2 = tmp.createGraphics();
g2.setRenderingHint(
RenderingHints.KEY_INTERPOLATION, RenderingHints.VALUE_INTERPOLATION_BICUBIC);
g2.drawImage(img, 0, 0, w, h, null);
g2.dispose();
img = tmp;
} else {
img = get(url);
}
} else {
img = get(name);
}
ii = new ImageIcon(img);
ICONS.put(name, ii);
return ii;
}
public void sendrecv(Request request, Response response, long timeout) throws IOException {
synchronized (response_map) {
makeKey(request);
response.isReceived = false;
try {
response_map.put(request, response);
doSend(request);
response.expiration = System.currentTimeMillis() + timeout;
while (!response.isReceived) {
response_map.wait(timeout);
timeout = response.expiration - System.currentTimeMillis();
if (timeout <= 0) {
throw new TransportException(name + " timedout waiting for response to " + request);
}
}
} catch (IOException ioe) {
if (log.level > 2) ioe.printStackTrace(log);
try {
disconnect(true);
} catch (IOException ioe2) {
ioe2.printStackTrace(log);
}
throw ioe;
} catch (InterruptedException ie) {
throw new TransportException(ie);
} finally {
response_map.remove(request);
}
}
}
/** Looks up the local database, creating if necessary. */
private DataSource findDatabaseImpl(String url, String driverName) throws SQLException {
try {
synchronized (_databaseMap) {
DBPool db = _databaseMap.get(url);
if (db == null) {
db = new DBPool();
db.setVar(url + "-" + _gId++);
DriverConfig driver = db.createDriver();
ClassLoader loader = Thread.currentThread().getContextClassLoader();
Class driverClass = Class.forName(driverName, false, loader);
driver.setType(driverClass);
driver.setURL(url);
db.init();
_databaseMap.put(url, db);
}
return db;
}
} catch (RuntimeException e) {
throw e;
} catch (SQLException e) {
throw e;
} catch (Exception e) {
throw ConfigException.create(e);
}
}
public ArrayList getPointList(long handId) {
ArrayList curList;
if (_pointLists.containsKey(handId)) curList = (ArrayList) _pointLists.get(handId);
else {
curList = new ArrayList(_maxPoints);
_pointLists.put(handId, curList);
}
return curList;
}
/**
* Add a ServiceMonitorFilter to this MonitorFilter
*
* @param serviceMonitorFilter Service Specific Filter
* @exception MonitorFilterException
* @return ServiceMonitorFilter Modified Filter to the capabilities of the service
*/
public ServiceMonitorFilter addServiceMonitorFilter(ServiceMonitorFilter serviceMonitorFilter)
throws MonitorFilterException {
ModuleClassID moduleClassID = serviceMonitorFilter.getModuleClassID();
if (serviceMonitorFilters.get(moduleClassID) != null)
throw new MonitorFilterException(
"Attempt to add a second Monitor Filter for: " + moduleClassID);
serviceMonitorFilters.put(moduleClassID, serviceMonitorFilter);
return serviceMonitorFilter;
}
public static void main(String[] args) throws Exception {
System.out.println("hello world! I am the client");
System.out.println("trying to connect to " + PEER_PORT);
Socket toPeer = null;
while (toPeer == null) {
try {
toPeer = new Socket("localhost", PEER_PORT);
} catch (UnknownHostException e) {
// TODO Auto-generated catch block
} catch (IOException e) {
// TODO Auto-generated catch block
} // First param: server-address, Second: the port
}
System.out.println("connected to " + PEER_PORT);
OutputStream out = null;
try {
out = toPeer.getOutputStream();
} catch (IOException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
// PrintStream ps = new PrintStream(out, true); // Second param: auto-flush on write = true
ObjectOutputStream oos = new ObjectOutputStream(out);
while (true) {
HashMap<String, String> dictionary = new HashMap<String, String>();
// TODO: first, send ACK to new client
// TODO: pick a new chunk to request
// TODO: then send request
dictionary.put("type", "request");
dictionary.put("body", "CHUNK_ID");
oos.writeObject(dictionary);
// TODO: wait to receive
}
}
void addTextField(JPanel panel, String key, String label) {
JLabel lab = new JLabel(label);
lab.setAlignmentX(LEFT_ALIGNMENT);
panel.add(lab);
JTextField field = new JTextField();
field.setText(sketch.configFile.get(key));
field.setMaximumSize(new Dimension(Integer.MAX_VALUE, field.getPreferredSize().height));
fields.put(key, field);
panel.add(field);
}
public void registerListener(int id, MessageListener m) {
HashSet listenerSet = (HashSet) idTable.get(new Integer(id));
if (listenerSet == null) {
listenerSet = new HashSet();
idTable.put(new Integer(id), listenerSet);
}
listenerSet.add(m);
log.info("New Listener for id=" + id);
}
public long openUdpSocket(InetSocketAddress address) throws IOException {
// TODO, don't throw an exception out of here.
DatagramChannel dg = DatagramChannel.open();
dg.configureBlocking(false);
dg.socket().bind(address);
long b = createBinding();
EventableChannel ec = new EventableDatagramChannel(dg, b, mySelector);
dg.register(mySelector, SelectionKey.OP_READ, ec);
Connections.put(b, ec);
return b;
}
private static void handleNonDownloadPost(Post post) {
for (Picture picture : post.pictures) {
if (!Main.pic_pic_hash.containsKey(picture)) {
Main.pic_pic_hash.put(picture, picture);
Main.pic_post_hash.put(picture, post);
} else {
if (!post.equals(Main.pic_post_hash.get(picture))) {
dup_post_list.put(post, Main.pic_post_hash.get(picture));
}
}
}
}
void addTextArea(JPanel panel, String key, String label) {
JLabel lab = new JLabel(label);
lab.setAlignmentX(LEFT_ALIGNMENT);
panel.add(lab);
JTextArea field = new JTextArea();
field.setText(sketch.configFile.get(key));
field.setLineWrap(true);
field.setWrapStyleWord(true);
fields.put(key, field);
JScrollPane scroll = new JScrollPane(field);
scroll.setAlignmentX(0.0f);
panel.add(scroll);
}
public boolean startProxy(long from, long to) {
// lazy init for proxy support check quickly in isReadable
if (ProxyConnections == null) {
ProxyConnections = new HashMap<Long, EventableChannel>();
}
EventableChannel target = Connections.get(to);
if (target != null) {
ProxyConnections.put(from, target);
return true;
} else {
return false;
}
}
public long attachChannel(SocketChannel sc, boolean watch_mode) {
long b = createBinding();
EventableSocketChannel ec = new EventableSocketChannel(sc, b, mySelector);
ec.setAttached();
if (watch_mode) ec.setWatchOnly();
Connections.put(b, ec);
NewConnections.add(b);
return b;
}
public long startTcpServer(SocketAddress sa) throws EmReactorException {
try {
ServerSocketChannel server = ServerSocketChannel.open();
server.configureBlocking(false);
server.socket().bind(sa);
long s = createBinding();
Acceptors.put(s, server);
server.register(mySelector, SelectionKey.OP_ACCEPT, s);
return s;
} catch (IOException e) {
throw new EmReactorException("unable to open socket acceptor: " + e.toString());
}
}
private void addMenuToTray() {
HashMap categories = new HashMap();
// create menu list
Iterator plugins = PluginManager.getInstance().getAvailablePlugins();
plugins = PluginComparator.sortPlugins(plugins);
while (plugins.hasNext()) {
Plugin p = (Plugin) plugins.next();
JMenu category = (JMenu) categories.get(p.getCategory());
if (category == null) {
category = new JMenu(p.getCategory());
categories.put(p.getCategory(), category);
// copy menu to real one
if (!p.getCategory().equals("Invisible")) this.trayIcon.add(category);
}
ImageIcon icon = new ImageIcon();
try {
icon = new ImageIcon(new URL(p.getDirectory() + p.getIcon()));
icon = new ImageIcon(icon.getImage().getScaledInstance(16, 16, Image.SCALE_SMOOTH));
} catch (Exception e) {
// error at icon loading
}
JMenuItem menu = new JMenuItem(p.getTitle(), icon);
menu.setName(p.getName());
menu.setToolTipText(p.getToolTip());
menu.addActionListener(this);
category.add(menu);
}
this.trayIcon.addSeparator();
// windows
this.trayIcon.add(new WindowMenu(this));
// open main interface
JMenuItem menu = new JMenuItem(tr("open"));
menu.setName("org.lucane.applications.maininterface");
menu.addActionListener(this);
this.trayIcon.add(menu);
// exit
menu = new JMenuItem(tr("exit"));
menu.setName("exit");
menu.addActionListener(this);
this.trayIcon.add(menu);
}
/**
* Retrieves default values from xml.
*
* @param list the configuration list
*/
private static void parseDefaults(NodeList list) {
for (int i = 0; i < list.getLength(); ++i) {
NamedNodeMap mapping = list.item(i).getAttributes();
String attribute = mapping.getNamedItem("attribute").getNodeValue();
String value = mapping.getNamedItem("value").getNodeValue();
try {
Default field = Default.fromString(attribute);
DEFAULTS.put(field, value);
} catch (IllegalArgumentException exc) {
logger.warn("Unrecognized default attribute: " + attribute);
}
}
}
protected void saveAuthCache() {
try {
this_mon.enter();
HashMap map = new HashMap();
Iterator it = auth_cache.values().iterator();
while (it.hasNext()) {
authCache value = (authCache) it.next();
if (value.isPersistent()) {
try {
HashMap entry_map = new HashMap();
entry_map.put("user", value.getAuth().getUserName().getBytes("UTF-8"));
entry_map.put("pw", new String(value.getAuth().getPassword()).getBytes("UTF-8"));
map.put(value.getKey(), entry_map);
} catch (Throwable e) {
Debug.printStackTrace(e);
}
}
}
COConfigurationManager.setParameter(CONFIG_PARAM, map);
} finally {
this_mon.exit();
}
}
private static void handlePost(Post post) {
Main.post_post_hash.put(post, post);
for (Picture picture : post.pictures) {
Helper.downloadFileFromURLToFileInTemp(picture.thumb_url, picture.thumb_name);
picture.md5_id = Helper.createMD5FromFileInTemp(picture.thumb_name);
Helper.moveTempImageToStore(picture.thumb_name, new File(Main.blogdir, picture.md5_id));
if (!Main.pic_pic_hash.containsKey(picture)) {
Main.pic_pic_hash.put(picture, picture);
Main.pic_post_hash.put(picture, post);
Helper.downloadFileFromURLToFileInTemp(picture.media_url, picture.media_name);
Helper.moveTempImageToStore(picture.media_name, new File(Main.blogdir, picture.md5_id));
} else {
if (!post.equals(Main.pic_post_hash.get(picture))) {
dup_post_list.put(post, Main.pic_post_hash.get(picture));
}
}
}
}
protected void handleMessage(Message msg) throws Exception {
Address dest = msg.getDest();
long len;
List tmp;
len = msg.size(); // todo: use msg.getLength() instead of msg.getSize()
if (len > max_bundle_size) {
throw new Exception(
"UDP.BundlingOutgoingPacketHandler.handleMessage(): "
+ "message size ("
+ len
+ ") is greater than UDP fragmentation size. "
+ "Set the fragmentation/bundle size in FRAG and UDP correctly");
}
if (total_bytes + len >= max_bundle_size) {
if (Trace.trace) {
Trace.info(
"UDP.BundlingOutgoingPacketHandler.handleMessage()",
"sending " + total_bytes + " bytes");
}
bundleAndSend(); // send all pending message and clear table
total_bytes = 0;
}
synchronized (msgs) {
tmp = (List) msgs.get(dest);
if (tmp == null) {
tmp = new List();
msgs.put(dest, tmp);
}
tmp.add(msg);
total_bytes += len;
}
if (!timer_running) { // first message to be bundled
startTimer();
}
}
void isAcceptable(SelectionKey k) {
ServerSocketChannel ss = (ServerSocketChannel) k.channel();
SocketChannel sn;
long b;
for (int n = 0; n < 10; n++) {
try {
sn = ss.accept();
if (sn == null) break;
} catch (IOException e) {
e.printStackTrace();
k.cancel();
ServerSocketChannel server = Acceptors.remove(k.attachment());
if (server != null)
try {
server.close();
} catch (IOException ex) {
}
;
break;
}
try {
sn.configureBlocking(false);
} catch (IOException e) {
e.printStackTrace();
continue;
}
b = createBinding();
EventableSocketChannel ec = new EventableSocketChannel(sn, b, mySelector);
Connections.put(b, ec);
NewConnections.add(b);
eventCallback(((Long) k.attachment()).longValue(), EM_CONNECTION_ACCEPTED, null, b);
}
}
public long connectTcpServer(String bindAddr, int bindPort, String address, int port) {
long b = createBinding();
try {
SocketChannel sc = SocketChannel.open();
sc.configureBlocking(false);
if (bindAddr != null) sc.socket().bind(new InetSocketAddress(bindAddr, bindPort));
EventableSocketChannel ec = new EventableSocketChannel(sc, b, mySelector);
if (sc.connect(new InetSocketAddress(address, port))) {
// Connection returned immediately. Can happen with localhost connections.
// WARNING, this code is untested due to lack of available test conditions.
// Ought to be be able to come here from a localhost connection, but that
// doesn't happen on Linux. (Maybe on FreeBSD?)
// The reason for not handling this until we can test it is that we
// really need to return from this function WITHOUT triggering any EM events.
// That's because until the user code has seen the signature we generated here,
// it won't be able to properly dispatch them. The C++ EM deals with this
// by setting pending mode as a flag in ALL eventable descriptors and making
// the descriptor select for writable. Then, it can send UNBOUND and
// CONNECTION_COMPLETED on the next pass through the loop, because writable will
// fire.
throw new RuntimeException("immediate-connect unimplemented");
} else {
ec.setConnectPending();
Connections.put(b, ec);
NewConnections.add(b);
}
} catch (IOException e) {
// Can theoretically come here if a connect failure can be determined immediately.
// I don't know how to make that happen for testing purposes.
throw new RuntimeException("immediate-connect unimplemented: " + e.toString());
}
return b;
}
/** Loads the lexicon and morph files. */
public void init(URL lexiconUrl, URL morphUrl) throws IOException {
List<Family> lexicon = null;
List<MorphItem> morph = null;
List<MacroItem> macroModel = null;
// load category families (lexicon), morph forms and macros
lexicon = getLexicon(lexiconUrl);
Pair<List<MorphItem>, List<MacroItem>> morphInfo = getMorph(morphUrl);
morph = morphInfo.a;
macroModel = morphInfo.b;
// index words; also index stems to words, as default preds
// store indexed coarticulation attrs too
_words = new GroupMap<Word, MorphItem>();
_predToWords = new GroupMap<String, Word>();
_coartAttrs = new HashSet<String>();
_indexedCoartAttrs = new HashSet<String>();
for (MorphItem morphItem : morph) {
Word surfaceWord = morphItem.getSurfaceWord();
_words.put(surfaceWord, morphItem);
_predToWords.put(morphItem.getWord().getStem(), surfaceWord);
if (morphItem.isCoart()) {
Word indexingWord = morphItem.getCoartIndexingWord();
_words.put(indexingWord, morphItem);
Pair<String, String> first = indexingWord.getSurfaceAttrValPairs().next();
_indexedCoartAttrs.add(first.a);
for (Iterator<Pair<String, String>> it = surfaceWord.getSurfaceAttrValPairs();
it.hasNext(); ) {
Pair<String, String> p = it.next();
_coartAttrs.add(p.a);
}
}
}
// index entries based on stem+pos
_stems = new GroupMap<String, Object>();
_posToEntries = new GroupMap<String, EntriesItem[]>();
// index entries by supertag+pos, for supertagging
_stagToEntries = new GroupMap<String, EntriesItem>();
// also index rels and coart rels to preds
_relsToPreds = new GroupMap<String, String>();
_coartRelsToPreds = new GroupMap<String, String>();
// and gather list of attributes used per atomic category type
_catsToAttrs = new GroupMap<String, String>();
_lfAttrs = new HashSet<String>();
// and remember family and ent, names, for checking excluded list on morph items
HashSet<String> familyAndEntryNames = new HashSet<String>();
// index each family
for (Family family : lexicon) {
familyAndEntryNames.add(family.getName());
EntriesItem[] entries = family.getEntries();
DataItem[] data = family.getData();
// for generic use when we get an unknown stem
// from the morphological analyzer
if (!family.isClosed()) {
_posToEntries.put(family.getPOS(), entries);
}
// scan through entries
for (int j = 0; j < entries.length; j++) {
// index
EntriesItem eItem = entries[j];
_stagToEntries.put(eItem.getSupertag() + family.getPOS(), eItem);
if (eItem.getStem().length() > 0) {
_stems.put(eItem.getStem() + family.getPOS(), eItem);
}
try {
// gather features
eItem.getCat().forall(gatherAttrs);
// record names
familyAndEntryNames.add(eItem.getName());
familyAndEntryNames.add(eItem.getQualifiedName());
} catch (RuntimeException exc) {
System.err.println("exception for: " + family.getName() + ": " + exc);
}
}
// scan through data
for (int j = 0; j < data.length; j++) {
DataItem dItem = data[j];
_stems.put(
dItem.getStem() + family.getPOS(), new Pair<DataItem, EntriesItem[]>(dItem, entries));
// index non-default preds to words
if (!dItem.getStem().equals(dItem.getPred())) {
Collection<Word> words = (Collection<Word>) _predToWords.get(dItem.getStem());
if (words == null) {
if (!openlex) {
System.out.print("Warning: couldn't find words for pred '");
System.out.println(dItem.getPred() + "' with stem '" + dItem.getStem() + "'");
}
} else {
for (Iterator<Word> it = words.iterator(); it.hasNext(); ) {
_predToWords.put(dItem.getPred(), it.next());
}
}
}
}
// index rels to preds
// nb: this covers relational (eg @x<GenRel>e) and featural (eg @e<tense>past)
// elementary predications
List<String> indexRels = new ArrayList<String>(3);
String familyIndexRel = family.getIndexRel();
if (familyIndexRel.length() > 0) {
indexRels.add(familyIndexRel);
}
for (int j = 0; j < entries.length; j++) {
EntriesItem eItem = entries[j];
String indexRel = eItem.getIndexRel();
if (indexRel.length() > 0 && !indexRel.equals(familyIndexRel)) {
indexRels.add(indexRel);
}
}
for (Iterator<String> it = indexRels.iterator(); it.hasNext(); ) {
String indexRel = it.next();
// nb: not indexing on entries items, b/c some stems are still defaults
for (int j = 0; j < data.length; j++) {
DataItem dItem = data[j];
_relsToPreds.put(indexRel, dItem.getPred());
}
}
// index coart rels (features, really) to preds
String coartRel = family.getCoartRel();
if (coartRel.length() > 0) {
for (int j = 0; j < data.length; j++) {
_coartRelsToPreds.put(coartRel, data[j].getPred());
}
}
}
// index the macros
_macros = new GroupMap<String, FeatureStructure>();
// nb: could just index MacroItem objects for feature structures too;
// this might be a bit cleaner, but life is short
_macroItems = new HashMap<String, MacroItem>();
for (MacroItem mi : macroModel) {
String macName = mi.getName();
FeatureStructure[] specs = mi.getFeatureStructures();
for (int j = 0; j < specs.length; j++) {
_macros.put(macName, specs[j]);
}
// this is for handling LF part of macros
_macroItems.put(macName, mi);
}
// with morph items, check POS, macro names, excluded list for xref
for (MorphItem morphItem : morph) {
Word w = morphItem.getWord();
if (!openlex
&& !_stems.containsKey(w.getStem() + w.getPOS())
&& !_posToEntries.containsKey(w.getPOS())) {
System.err.println(
"Warning: no entries for stem '"
+ w.getStem()
+ "' and POS '"
+ w.getPOS()
+ "' found for word '"
+ w
+ "'");
}
String[] macroNames = morphItem.getMacros();
for (int j = 0; j < macroNames.length; j++) {
if (!_macroItems.containsKey(macroNames[j])) {
System.err.println(
"Warning: macro "
+ macroNames[j]
+ " not found for word '"
+ morphItem.getWord()
+ "'");
}
}
String[] excludedNames = morphItem.getExcluded();
for (int j = 0; j < excludedNames.length; j++) {
if (!familyAndEntryNames.contains(excludedNames[j])) {
System.err.println(
"Warning: excluded family or entry '"
+ excludedNames[j]
+ "' not found for word '"
+ morphItem.getWord()
+ "'");
}
}
}
}
private void mapAndTocForFile(File f, File path, String underscore) {
// we get the single name of the file and the urlname
int under_index2 = f.getName().indexOf("_");
int point_index2 = f.getName().indexOf(".");
String named = f.getName().substring(under_index2 + 1, point_index2);
String tmp = path.getAbsolutePath() + "Main_pages/fr/";
String url_name = f.getPath().replace("\\", "/").substring(tmp.length());
String targetName = url_name.substring(0, url_name.lastIndexOf(".html"));
// now we will add into the map and the toc
print.println("<mapID target=\"" + targetName + "\" url=\"pages/" + url_name + "\"/>");
File dir_associated = new File(f.getParent(), named);
if ((dir_associated.exists() && dir_associated.isDirectory()) || named.equals("objects")) {
print2.println(
"<tocitem text=\"" + getTitle(f) + "\" target=\"" + targetName + "\" image=\"tamicon\">");
if (dir_associated.exists()) {
// Apres on fait pareil pour tous les sous fichiers
File[] sub_files = dir_associated.listFiles();
for (int i = 0; i < sub_files.length; i++) {
if (!sub_files[i].getName().equals("CVS") && sub_files[i].isFile()) {
if (sub_files[i].getName().endsWith(".html"))
mapAndTocForFile(sub_files[i], path, underscore);
else {
try {
copyFile(
sub_files[i], new File(path, "pages/" + named + "/" + sub_files[i].getName()));
} catch (IOException e) {
LOG.error("Error while copying normal files in help " + e);
}
}
}
}
}
if (named.equals("objects")) {
// Specialement pour les objets on les rajoute tous
File objects_dir =
new File(
Configuration.instance()
.getTangaraPath()
.getParentFile()
.getAbsolutePath()
.replace("\\", "/")
+ "/objects/");
File[] listfiles = objects_dir.listFiles();
Vector<String> list_names = new Vector<String>();
HashMap<String, String> map = new HashMap<String, String>();
for (int i = 0; i < listfiles.length; i++) {
try {
if (listfiles[i].getName().endsWith(".jar")) {
int point_index = listfiles[i].getName().lastIndexOf(".");
String name = listfiles[i].getName().substring(0, point_index);
// Copy the pages in the right directory
File object_dir = new File(path, "pages/" + name);
object_dir.mkdir();
File object_ressource =
new File(
Configuration.instance()
.getTangaraPath()
.getParentFile()
.getAbsolutePath()
.replace("\\", "/")
+ "/objects/resources/"
+ name
+ "/Help");
if (object_ressource.exists()) {
File[] list_html_object = object_ressource.listFiles();
for (int e = 0; e < list_html_object.length; e++) {
if (list_html_object[e].getName().endsWith(".html")) {
int under_index = list_html_object[e].getName().lastIndexOf("_");
if (underscore.equals("") && under_index == -1)
copyFile(
list_html_object[e],
new File(path, "pages/" + name + "/" + list_html_object[e].getName()));
else if (!underscore.equals("")) {
if (list_html_object[e].getName().contains(underscore))
copyFile(
list_html_object[e],
new File(path, "pages/" + name + "/" + list_html_object[e].getName()));
}
} else
copyFile(
list_html_object[e],
new File(path, "pages/" + name + "/" + list_html_object[e].getName()));
}
// Gets the name of the object in the selected language
String name_lang = null;
if (underscore.equals("")) name_lang = name;
else {
name_lang = getLangName(listfiles[i]);
}
if (name_lang != null) {
list_names.add(name_lang);
map.put(name_lang, name);
// Add to the map file
print.println(
"<mapID target=\""
+ name
+ "\" url=\"pages/"
+ name
+ "/index"
+ underscore
+ ".html\" />");
}
}
}
} catch (Exception e2) {
LOG.error("Error2 getHelp " + e2);
}
}
// Add to the tam file
Collections.sort(list_names);
for (String s : list_names) {
print2.println(
"<tocitem text=\"" + s + "\" target=\"" + map.get(s) + "\" image=\"fileicon\" />");
}
}
print2.println("</tocitem>");
} else {
// pas de sous fichiers
print2.println(
"<tocitem text=\""
+ getTitle(f)
+ "\" target=\""
+ targetName
+ "\" image=\"fileicon\"/>");
}
File parent = new File(path, "pages/" + url_name.substring(0, url_name.lastIndexOf(named) - 3));
if (!parent.exists()) parent.mkdirs();
File in_pages = new File(path, "pages/" + url_name);
try {
in_pages.createNewFile();
copyFile(f, in_pages);
} catch (IOException e3) {
LOG.error("Error 3 getHelp " + e3 + " " + f.getName());
}
}
static void initializePlugins(@Nullable StartupProgress progress) {
configureExtensions();
final IdeaPluginDescriptorImpl[] pluginDescriptors = loadDescriptors(progress);
final Class callerClass = ReflectionUtil.findCallerClass(1);
assert callerClass != null;
final ClassLoader parentLoader = callerClass.getClassLoader();
final List<IdeaPluginDescriptorImpl> result = new ArrayList<IdeaPluginDescriptorImpl>();
final HashMap<String, String> disabledPluginNames = new HashMap<String, String>();
for (IdeaPluginDescriptorImpl descriptor : pluginDescriptors) {
if (descriptor.getPluginId().getIdString().equals(CORE_PLUGIN_ID)) {
final List<String> modules = descriptor.getModules();
if (modules != null) {
ourAvailableModules.addAll(modules);
}
}
if (!shouldSkipPlugin(descriptor, pluginDescriptors)) {
result.add(descriptor);
} else {
descriptor.setEnabled(false);
disabledPluginNames.put(descriptor.getPluginId().getIdString(), descriptor.getName());
initClassLoader(parentLoader, descriptor);
}
}
prepareLoadingPluginsErrorMessage(filterBadPlugins(result, disabledPluginNames));
final Map<PluginId, IdeaPluginDescriptorImpl> idToDescriptorMap =
new HashMap<PluginId, IdeaPluginDescriptorImpl>();
for (final IdeaPluginDescriptorImpl descriptor : result) {
idToDescriptorMap.put(descriptor.getPluginId(), descriptor);
}
final IdeaPluginDescriptor corePluginDescriptor =
idToDescriptorMap.get(PluginId.getId(CORE_PLUGIN_ID));
assert corePluginDescriptor != null
: CORE_PLUGIN_ID
+ " not found; platform prefix is "
+ System.getProperty(PlatformUtilsCore.PLATFORM_PREFIX_KEY);
for (IdeaPluginDescriptorImpl descriptor : result) {
if (descriptor != corePluginDescriptor) {
descriptor.insertDependency(corePluginDescriptor);
}
}
mergeOptionalConfigs(idToDescriptorMap);
// sort descriptors according to plugin dependencies
Collections.sort(result, getPluginDescriptorComparator(idToDescriptorMap));
for (int i = 0; i < result.size(); i++) {
ourId2Index.put(result.get(i).getPluginId(), i);
}
int i = 0;
for (final IdeaPluginDescriptorImpl pluginDescriptor : result) {
if (pluginDescriptor.getPluginId().getIdString().equals(CORE_PLUGIN_ID)
|| pluginDescriptor.isUseCoreClassLoader()) {
pluginDescriptor.setLoader(parentLoader, true);
} else {
final List<File> classPath = pluginDescriptor.getClassPath();
final PluginId[] dependentPluginIds = pluginDescriptor.getDependentPluginIds();
final ClassLoader[] parentLoaders = getParentLoaders(idToDescriptorMap, dependentPluginIds);
final ClassLoader pluginClassLoader =
createPluginClassLoader(
classPath.toArray(new File[classPath.size()]),
parentLoaders.length > 0 ? parentLoaders : new ClassLoader[] {parentLoader},
pluginDescriptor);
pluginDescriptor.setLoader(pluginClassLoader, true);
}
pluginDescriptor.registerExtensions();
if (progress != null) {
progress.showProgress(
"", PLUGINS_PROGRESS_MAX_VALUE + (i++ / (float) result.size()) * 0.35f);
}
}
ourPlugins = pluginDescriptors;
}
private void restGotoStep(final PwmRequest pwmRequest, final ConfigGuideBean configGuideBean)
throws PwmUnrecoverableException, IOException, ServletException {
final String requestedStep = pwmRequest.readParameterAsString("step");
STEP step = null;
if (requestedStep != null && requestedStep.length() > 0) {
try {
step = STEP.valueOf(requestedStep);
} catch (IllegalArgumentException e) {
/* */
}
}
final boolean ldapSchemaPermitted =
"LDAP".equals(configGuideBean.getFormData().get(PARAM_CR_STORAGE_PREF))
&& configGuideBean.getSelectedTemplate() == PwmSettingTemplate.NOVL;
if ("NEXT".equals(requestedStep)) {
step = configGuideBean.getStep().next();
if (step == STEP.LDAP_SCHEMA && !ldapSchemaPermitted) {
step = step.next();
}
} else if ("PREVIOUS".equals(requestedStep)) {
step = configGuideBean.getStep().previous();
if (step == STEP.LDAP_SCHEMA && !ldapSchemaPermitted) {
step = step.previous();
}
}
if (step == null) {
final String errorMsg = "unknown goto step request: " + requestedStep;
final ErrorInformation errorInformation =
new ErrorInformation(PwmError.CONFIG_FORMAT_ERROR, errorMsg);
final RestResultBean restResultBean = RestResultBean.fromError(errorInformation, pwmRequest);
LOGGER.error(pwmRequest, errorInformation.toDebugStr());
pwmRequest.outputJsonResult(restResultBean);
return;
}
if (step == STEP.FINISH) {
final ContextManager contextManager = ContextManager.getContextManager(pwmRequest);
try {
writeConfig(contextManager, configGuideBean);
} catch (PwmException e) {
final RestResultBean restResultBean =
RestResultBean.fromError(e.getErrorInformation(), pwmRequest);
pwmRequest.outputJsonResult(restResultBean);
return;
} catch (Exception e) {
final RestResultBean restResultBean =
RestResultBean.fromError(
new ErrorInformation(
PwmError.ERROR_UNKNOWN, "error during save: " + e.getMessage()),
pwmRequest);
pwmRequest.outputJsonResult(restResultBean);
return;
}
final HashMap<String, String> resultData = new HashMap<>();
resultData.put("serverRestart", "true");
pwmRequest.outputJsonResult(new RestResultBean(resultData));
pwmRequest.invalidateSession();
} else {
configGuideBean.setStep(step);
pwmRequest.outputJsonResult(new RestResultBean());
LOGGER.trace("setting current step to: " + step);
}
}