public List removePendingMessages(MessageTemplate template) {
synchronized (pendingCommands) {
List messages = new ArrayList();
List commands = new ArrayList();
Enumeration e = pendingCommands.elements();
while (e.hasMoreElements()) {
PostponedCommand pc = (PostponedCommand) e.nextElement();
Command c = pc.getCommand();
if (c.getCode() == FrontEndSkel.MESSAGE_IN) {
ACLMessage msg = (ACLMessage) c.getParamAt(0);
if (template.match(msg)) {
Object[] oo = new Object[] {msg, c.getParamAt(1)};
messages.add(oo);
commands.add(c);
}
}
}
// Remove all the commands carrying matching messages
Iterator it = commands.iterator();
while (it.hasNext()) {
pendingCommands.remove(it.next());
}
// Return the list of matching messages
return messages;
}
}
void initMandatoryServices(List services) throws ServiceException {
ServiceDescriptor dsc = startService("jade.core.management.BEAgentManagementService", false);
dsc.setMandatory(true);
services.add(dsc);
dsc = startService("jade.core.messaging.MessagingService", false);
dsc.setMandatory(true);
services.add(dsc);
}
private pikater.ontology.messages.Option convertOption(MyWekaOption _weka_opt) {
pikater.ontology.messages.Option opt = new pikater.ontology.messages.Option();
Interval interval = null;
opt.setMutable(_weka_opt.mutable);
interval = new Interval();
interval.setMin(_weka_opt.lower);
interval.setMax(_weka_opt.upper);
opt.setRange(interval);
if (_weka_opt.set != null) {
// copy array to List
List set = new ArrayList();
for (int i = 0; i < _weka_opt.set.length; i++) {
set.add(_weka_opt.set[i]);
}
opt.setSet(set);
}
opt.setIs_a_set(_weka_opt.isASet);
interval = new Interval();
interval.setMin(_weka_opt.numArgsMin);
interval.setMax(_weka_opt.numArgsMax);
opt.setNumber_of_args(interval);
opt.setData_type(_weka_opt.type.toString());
opt.setDescription(_weka_opt.description);
opt.setName(_weka_opt.name);
opt.setSynopsis(_weka_opt.synopsis);
opt.setDefault_value(_weka_opt.default_value);
opt.setValue(_weka_opt.default_value);
return opt;
}
public void doNotSniff(String agentName) {
String realName = checkString(agentName);
agent = new Agent(realName);
noSniffedAgents.add(agent);
mainPanel.panelcan.canvAgent.removeAgent(agent.agentName);
mainPanel.panelcan.canvAgent.repaintNoSniffedAgent(agent);
mySniffer.sniffMsg(noSniffedAgents, Sniffer.SNIFF_OFF); // Sniff the Agents
noSniffedAgents.clear();
}
/** returns the results of an action requested. */
public List getResult() throws FIPAException, NotYetReady {
if (notYetReady) throw new NotYetReady();
if (lastMsg.getPerformative() != ACLMessage.INFORM) throw new FIPAException(lastMsg);
Result r = AppletRequestProto.extractContent(lastMsg.getContent(), (SLCodec) c, o);
Iterator i = r.getItems().iterator(); // this is the set of DFAgentDescription
List l = new ArrayList();
while (i.hasNext()) l.add(i.next());
return l;
}
private String[] parseAddressList(String toParse) {
StringTokenizer lexer = new StringTokenizer(toParse, ADDR_LIST_DELIMITERS);
List addresses = new ArrayList();
while (lexer.hasMoreTokens()) {
String tok = lexer.nextToken();
addresses.add(tok);
}
Object[] objs = addresses.toArray();
String[] result = new String[objs.length];
for (int i = 0; i < result.length; i++) {
result[i] = (String) objs[i];
}
return result;
}
Object processInformation(Information info) {
// -------------------------------------------
Account acc = (Account) accounts.get(info.getAccountId());
if (acc == null) return newProblem(ACCOUNT_NOT_FOUND);
java.util.Date date = new java.util.Date();
Operation op = new Operation(); // <-- Apply admin charge
op.setType(ADMIN);
op.setAmount(info.getType() == BALANCE ? BAL_CHARGE : OPER_CHARGE);
acc.setBalance(acc.getBalance() - op.getAmount());
op.setBalance(acc.getBalance());
op.setAccountId(acc.getId());
op.setDate(date);
List l = (List) operations.get(acc.getId());
l.add(op);
operations.put(acc.getId(), l);
if (info.getType() == BALANCE) return acc;
if (info.getType() == OPERATIONS) return l;
return null;
}
Object processOperation(MakeOperation mo) {
// -------------------------------------------
Account acc = (Account) accounts.get(mo.getAccountId());
if (acc == null) return newProblem(ACCOUNT_NOT_FOUND);
if (mo.getAmount() <= 0) return newProblem(ILLEGAL_OPERATION);
if (mo.getType() != DEPOSIT && mo.getType() != WITHDRAWAL) return null;
if (mo.getType() == DEPOSIT) acc.setBalance(acc.getBalance() + mo.getAmount());
else if (mo.getType() == WITHDRAWAL) {
if (mo.getAmount() > acc.getBalance()) return newProblem(NOT_ENOUGH_MONEY);
acc.setBalance(acc.getBalance() - mo.getAmount());
}
Operation op = new Operation();
op.setType(mo.getType());
op.setAmount(mo.getAmount());
op.setAccountId(acc.getId());
op.setDate(new java.util.Date());
List l = (List) operations.get(acc.getId());
l.add(op);
operations.put(acc.getId(), l);
return acc;
}
public void fillWekaInstances(weka.core.Instances winsts) {
// set name
setName(winsts.relationName());
// set attributes
List onto_attrs = new ArrayList();
for (int i = 0; i < winsts.numAttributes(); i++) {
Attribute a = new Attribute();
a.fillWekaAttribute(winsts.attribute(i));
onto_attrs.add(a);
}
setAttributes(onto_attrs);
// set instances
List onto_insts = new ArrayList();
for (int i = 0; i < winsts.numInstances(); i++) {
Instance inst = new Instance();
weka.core.Instance winst = winsts.instance(i);
List instvalues = new ArrayList();
List instmis = new ArrayList();
for (int j = 0; j < winst.numValues(); j++) {
if (winst.isMissing(j)) {
instvalues.add(new Double(0.0));
instmis.add(new Boolean(true));
} else {
instvalues.add(new Double(winst.value(j)));
instmis.add(new Boolean(false));
}
}
inst.setValues(instvalues);
inst.setMissing(instmis);
onto_insts.add(inst);
}
setInstances(onto_insts);
setClass_index(winsts.classIndex());
}
public void addWeightedDescriptors(WeightedDescriptor elem) {
weightedDescriptors.add(elem);
pcs.firePropertyChange("weightedDescriptors", oldList, this.weightedDescriptors);
}
/**
* Add a content language name to the <code>languages</code> slot collection of this object.
*
* @param l The content language name to add to the collection.
*/
public void addLanguages(String l) {
language.add(l);
}
public void addDescribedBy(Object elem) {
describedBy.add(elem);
}
@Override
protected Agent chooseBestAgent(Data data) {
Metadata metadata = data.getMetadata();
GetAllMetadata gm = new GetAllMetadata();
gm.setResults_required(true);
// 1. choose the nearest training data
List allMetadata = DataManagerService.getAllMetadata(this, gm);
// set the min, max instances and attributes first
Iterator itr = allMetadata.iterator();
while (itr.hasNext()) {
Metadata next_md = (Metadata) itr.next();
int na = next_md.getNumber_of_attributes();
minAttributes = Math.min(minAttributes, na);
maxAttributes = Math.max(maxAttributes, na);
int ni = next_md.getNumber_of_instances();
minInstances = Math.min(ni, minInstances);
maxInstances = Math.max(ni, maxInstances);
}
ArrayList<MetadataDistancePair> distances = new ArrayList<MetadataDistancePair>();
itr = allMetadata.iterator();
while (itr.hasNext()) {
Metadata next_md = (Metadata) itr.next();
double dNew = distance(metadata, next_md);
distances.add(new MetadataDistancePair(next_md, dNew));
}
Collections.sort(distances);
List agents = new LinkedList();
for (int i = 0; i < M; i++) {
log(distances.get(i).m.getExternal_name() + ": " + distances.get(i).d);
List ag = DataManagerService.getTheBestAgents(this, distances.get(i).m.getInternal_name(), N);
Iterator it = ag.iterator();
while (it.hasNext()) {
agents.add(it.next());
}
}
HashMap<String, Integer> counts = new HashMap<String, Integer>();
Iterator it = agents.iterator();
while (it.hasNext()) {
Agent a = (Agent) it.next();
if (counts.containsKey(a.getType())) {
counts.put(a.getType(), counts.get(a.getType()) + 1);
} else {
counts.put(a.getType(), 1);
}
}
int maxCount = 0;
String bestAgentType = null;
for (String s : counts.keySet()) {
log(s + ": " + counts.get(s));
if (counts.get(s) > maxCount) {
maxCount = counts.get(s);
bestAgentType = s;
}
}
log("Best agent: " + bestAgentType);
ArrayList<Agent> bestAgentOptions = new ArrayList<Agent>();
it = agents.iterator();
while (it.hasNext()) {
Agent a = (Agent) it.next();
if (a.getType().equals(bestAgentType)) {
bestAgentOptions.add(a);
}
}
List optionSamples = getAgentOptions(bestAgentType);
List options = new LinkedList();
it = optionSamples.iterator();
while (it.hasNext()) {
Option o = (Option) it.next();
Option newOpt = o.copyOption();
// ignore boolean and set options for now, set their value to the one of the best agent on
// closest file
if (o.getData_type().equals("BOOLEAN") || o.getData_type().equals("MIXED")) {
if (bestAgentOptions.get(0).getOptionByName(o.getName()) == null) {
continue;
}
newOpt.setValue(bestAgentOptions.get(0).getOptionByName(o.getName()).getValue());
} else {
double sum = 0;
int count = 0;
String optionName = o.getName();
for (Agent a : bestAgentOptions) {
if (a.getOptionByName(optionName) != null) {
sum += Double.parseDouble(a.getOptionByName(optionName).getValue());
}
count++;
}
double avg = sum / count;
double stdDev = 0;
for (Agent a : bestAgentOptions) {
if (a.getOptionByName(optionName) != null) {
stdDev +=
Math.pow(Double.parseDouble(a.getOptionByName(optionName).getValue()) - avg, 2);
}
}
stdDev = Math.sqrt(stdDev / count);
if (stdDev > 0) {
newOpt.setValue("?");
newOpt.setUser_value("?");
newOpt.setMutable(true);
Interval range = new Interval();
range.setMin((float) Math.max(avg - 2 * stdDev, o.getRange().getMin()));
range.setMax((float) Math.min(avg + 2 * stdDev, o.getRange().getMax()));
newOpt.setRange(range);
} else {
if (o.getData_type().equals("FLOAT")) {
newOpt.setValue(Double.toString(avg));
}
if (o.getData_type().equals("INT")) {
newOpt.setValue(Integer.toString((int) avg));
}
}
}
options.add(newOpt);
}
Agent agent = new Agent();
agent.setName(null);
agent.setType(bestAgentType);
agent.setOptions(options);
return agent;
}
/**
* @param out
* @param parser
* @param sender the sender of the message
* @param receiver the receiver of the message
* @param actionName the action requested
* @param parentDF the df to wich request an action (used for federate action)
*/
JADEAppletRequestProto(
DFAppletCommunicator communicator,
AID receiver,
String actionName,
Object description,
Object parentDF,
SearchConstraints constraints)
throws FIPAException {
super(communicator.getStream(), communicator.getParser(), new ACLMessage(ACLMessage.REQUEST));
this.gui = communicator.getGUI();
this.dfApplet = communicator;
ACLMessage request = new ACLMessage(ACLMessage.REQUEST);
// request.setSender(sender);
request.addReceiver(receiver);
request.setProtocol(FIPANames.InteractionProtocol.FIPA_REQUEST);
request.setLanguage(FIPANames.ContentLanguage.FIPA_SL);
request.setOntology(DFAppletOntology.NAME);
request.setReplyWith("rw" + (new Date()).getTime());
request.setConversationId("conv" + (new Date()).getTime());
this.reqMsg = (ACLMessage) request.clone();
this.action = actionName;
this.receiver = receiver;
this.parent = (AID) parentDF;
Action act = new Action();
act.setActor(receiver);
if (actionName.equalsIgnoreCase(DFAppletVocabulary.FEDERATE)) {
Federate action = new Federate();
action.setDf((AID) parentDF);
action.setDescription((DFAgentDescription) description);
act.setAction(action);
} else if (actionName.equalsIgnoreCase(DFAppletVocabulary.GETDESCRIPTION))
act.setAction(new GetDescription());
else if (actionName.equalsIgnoreCase(DFAppletVocabulary.GETPARENTS))
act.setAction(new GetParents());
else if (actionName.equalsIgnoreCase(DFAppletVocabulary.GETDESCRIPTIONUSED)) {
GetDescriptionUsed action = new GetDescriptionUsed();
action.setParentDF((AID) parentDF);
act.setAction(action);
} else if (actionName.equalsIgnoreCase(DFAppletVocabulary.DEREGISTERFROM)) {
DeregisterFrom action = new DeregisterFrom();
action.setDf((AID) parentDF);
action.setDescription((DFAgentDescription) description);
act.setAction(action);
} else if (actionName.equalsIgnoreCase(DFAppletVocabulary.REGISTERWITH)) {
RegisterWith action = new RegisterWith();
action.setDf((AID) parentDF);
action.setDescription((DFAgentDescription) description);
act.setAction(action);
} else if (actionName.equalsIgnoreCase(DFAppletVocabulary.SEARCHON)) {
SearchOn action = new SearchOn();
action.setDf((AID) parentDF);
action.setDescription((DFAgentDescription) description);
action.setConstraints(constraints);
act.setAction(action);
} else if (actionName.equalsIgnoreCase(DFAppletVocabulary.MODIFYON)) {
ModifyOn action = new ModifyOn();
action.setDf((AID) parentDF);
action.setDescription((DFAgentDescription) description);
act.setAction(action);
} else throw new UnsupportedFunction();
// initialize SL0 Codec and FIPAAgentManagementOntology
// FIXME for applet I have not the agent c = sender.lookupLanguage(SL0Codec.NAME);
// if (c == null)
c = new SLCodec();
// Write the action in the :content slot of the request
List content = new ArrayList();
content.add(act);
try {
String s = ((SLCodec) c).encode(o, (AbsContentElement) o.fromObject(act));
this.reqMsg.setContent(s);
} catch (OntologyException oe) {
oe.printStackTrace();
throw new FIPAException("Ontology error: " + oe.getMessage());
} catch (Exception e) {
e.printStackTrace();
}
}
@Override
protected void getParameters() {
// fills the global Options vector
System.out.println(getLocalName() + ": The options are: ");
String optPath = System.getProperty("user.dir") + getOptFileName();
agent_options = new pikater.ontology.messages.Agent();
agent_options.setName(getLocalName());
agent_options.setType(getAgentType());
// read options from file
try {
/* Sets up a file reader to read the options file */
FileReader input = new FileReader(optPath);
/*
* Filter FileReader through a Buffered read to read a line at a
* time
*/
BufferedReader bufRead = new BufferedReader(input);
String line; // String that holds current file line
int count = 0; // Line number of count
// Read first line
line = bufRead.readLine();
count++;
// list of ontology.messages.Option
List _options = new ArrayList();
// Read through file one line at time. Print line # and line
while (line != null) {
System.out.println(" " + count + ": " + line);
// parse the line
String delims = "[ ]+";
String[] params = line.split(delims, 7);
if (params[0].equals("$")) {
MyWekaOption.dataType dt = MyWekaOption.dataType.BOOLEAN;
if (params[2].equals("boolean")) {
dt = MyWekaOption.dataType.BOOLEAN;
}
if (params[2].equals("float")) {
dt = MyWekaOption.dataType.FLOAT;
}
if (params[2].equals("int")) {
dt = MyWekaOption.dataType.INT;
}
if (params[2].equals("mixed")) {
dt = MyWekaOption.dataType.MIXED;
}
String[] default_options = ((Classifier) getModelObject()).getOptions();
Enumeration en = ((Classifier) getModelObject()).listOptions();
while (en.hasMoreElements()) {
Option next = (weka.core.Option) en.nextElement();
String default_value = "False";
for (int i = 0; i < default_options.length; i++) {
if (default_options[i].equals("-" + next.name())) {
if (default_options[i].startsWith("-")) {
// if the next array element is again an
// option name,
// (or it is the last element)
// => it's a boolean parameter
if (i == default_options.length - 1) {
default_value = "True";
} else {
// if
// (default_options[i+1].startsWith("-")){
if (default_options[i + 1].matches("\\-[A-Z]")) {
default_value = "True";
} else {
default_value = default_options[i + 1];
}
}
}
}
}
if ((next.name()).equals(params[1])) {
MyWekaOption o;
if (params.length > 4) {
o =
new MyWekaOption(
next.description(),
next.name(),
next.numArguments(),
next.synopsis(),
dt,
new Integer(params[3]).intValue(),
new Integer(params[4]).intValue(),
params[5],
default_value,
params[6]);
} else {
o =
new MyWekaOption(
next.description(),
next.name(),
next.numArguments(),
next.synopsis(),
dt,
0,
0,
"",
default_value,
"");
}
// convert&save o to options vector
_options.add(convertOption(o));
}
}
}
line = bufRead.readLine();
count++;
}
agent_options.setOptions(_options);
bufRead.close();
} catch (ArrayIndexOutOfBoundsException e) {
/*
* If no file was passed on the command line, this exception is
* generated. A message indicating how to the class should be called
* is displayed
*/
System.out.println("Usage: java ReadFile filename\n");
} catch (Exception e) {
e.printStackTrace();
System.err.println(getLocalName() + ": Reading options from .opt file failed.");
}
// Save the agent's options
/*
* Enumeration en = cls.listOptions();
*
* while(en.hasMoreElements()){ Option next =
* (weka.core.Option)en.nextElement();
* System.out.println(" "+next.description()+ ", " +next.name()+ ", "
* +next.numArguments()+ ", " +next.synopsis() ); System.out.println();
* }
*/
/*
* System.out.println("MyWekaOptions: "); for (Enumeration e =
* Options.elements() ; e.hasMoreElements() ;) { MyWekaOption next =
* (MyWekaOption)e.nextElement(); System.out.print(next.name+" ");
* System.out.print(next.lower+" "); System.out.print(next.upper+" ");
* System.out.print(next.type+" ");
* System.out.print(next.numArgsMin+" ");
* System.out.print(next.numArgsMax+" "); System.out.println(next.set);
* System.out.println("------------"); }
*/
} // end getParameters
public void addScore(Object elem) {
score.add(elem);
pcs.firePropertyChange("score", oldList, this.score);
}
public void addScore(Object elem) {
score.add(elem);
}
// remove this method when the bug with opts parsing is removed
List readOptionsFromFile(String agentName) {
String optPath =
System.getProperty("user.dir")
+ System.getProperty("file.separator")
+ "options"
+ System.getProperty("file.separator")
+ agentName
+ ".opt";
// read options from file
try {
/* Sets up a file reader to read the options file */
FileReader input = new FileReader(optPath);
/*
* Filter FileReader through a Buffered read to read a line at a
* time
*/
BufferedReader bufRead = new BufferedReader(input);
String line; // String that holds current file line
int count = 0; // Line number of count
// Read first line
line = bufRead.readLine();
count++;
// list of ontology.messages.Option
List _options = new jade.util.leap.ArrayList();
// Read through file one line at time. Print line # and line
while (line != null) {
// parse the line
String delims = "[ ]+";
String[] params = line.split(delims, 11);
for (int i = 0; i < params.length; i++) {
if (params[i].equals("MAXINT")) {
params[i] = Integer.toString(Integer.MAX_VALUE);
}
}
if (params[0].equals("$")) {
String dt = null;
if (params[2].equals("boolean")) {
dt = "BOOLEAN";
}
if (params[2].equals("float")) {
dt = "FLOAT";
}
if (params[2].equals("int")) {
dt = "INT";
}
if (params[2].equals("mixed")) {
dt = "MIXED";
}
float numArgsMin;
float numArgsMax;
float rangeMin = 0;
float rangeMax = 0;
String range;
List set = null;
if (dt.equals("BOOLEAN")) {
numArgsMin = 1;
numArgsMax = 1;
range = null;
} else {
numArgsMin = Float.parseFloat(params[3]);
numArgsMax = Float.parseFloat(params[4]);
range = params[5];
if (range.equals("r")) {
rangeMin = Float.parseFloat(params[6]);
rangeMax = Float.parseFloat(params[7]);
}
if (range.equals("s")) {
set = new jade.util.leap.ArrayList();
String[] s = params[6].split("[ ]+");
for (int i = 0; i < s.length; i++) {
set.add(s[i]);
}
}
}
Option o =
new Option(
params[1],
dt,
numArgsMin,
numArgsMax,
range,
rangeMin,
rangeMax,
set,
params[params.length - 3],
params[params.length - 2],
params[params.length - 1]);
_options.add(o);
}
line = bufRead.readLine();
count++;
}
bufRead.close();
return _options;
} catch (IOException e) {
e.printStackTrace();
} catch (NumberFormatException e) {
e.printStackTrace();
}
return null;
}
/**
* Add a service description to the <code>service</code> slot collection of this object.
*
* @param a The service description to add to the collection.
*/
public void addServices(ServiceDescription a) {
services.add(a);
}
public void addApliesTo(Object elem) {
apliesTo.add(elem);
}
/** Add a sub behaviour to this <code>SequentialBehaviour</code> */
public void addSubBehaviour(Behaviour b) {
subBehaviours.add(b);
b.setParent(this);
b.setAgent(myAgent);
}
/**
* Add a protocol name to the <code>protocols</code> slot collection of this object.
*
* @param ip The protocol name to add to the collection.
*/
public void addProtocols(String ip) {
interactionProtocols.add(ip);
}
// For persistence service
private void setSubBehaviours(Behaviour[] behaviours) {
subBehaviours.clear();
for (int i = 0; i < behaviours.length; i++) {
subBehaviours.add(behaviours[i]);
}
}
private void postponeAfterFrontEndSynch(ACLMessage msg, String sender) {
// No need for synchronization since this is called within a synchronized block
fronEndSynchBuffer.add(new MessageSenderPair(msg, sender));
}
/**
* Add an ontology name to the <code>ontologies</code> slot collection of this object.
*
* @param o The ontology name to add to the collection.
*/
public void addOntologies(String o) {
ontology.add(o);
}
