public static ims.oncology.domain.objects.PathologyDetails extractPathologyDetails(
ims.domain.ILightweightDomainFactory domainFactory,
ims.clinicaladmin.vo.PathologyDetailsVo valueObject,
HashMap domMap) {
if (null == valueObject) {
return null;
}
Integer id = valueObject.getID_PathologyDetails();
ims.oncology.domain.objects.PathologyDetails domainObject = null;
if (null == id) {
if (domMap.get(valueObject) != null) {
return (ims.oncology.domain.objects.PathologyDetails) domMap.get(valueObject);
}
// ims.clinicaladmin.vo.PathologyDetailsVo ID_PathologyDetails field is unknown
domainObject = new ims.oncology.domain.objects.PathologyDetails();
domMap.put(valueObject, domainObject);
} else {
String key = (valueObject.getClass().getName() + "__" + valueObject.getID_PathologyDetails());
if (domMap.get(key) != null) {
return (ims.oncology.domain.objects.PathologyDetails) domMap.get(key);
}
domainObject =
(ims.oncology.domain.objects.PathologyDetails)
domainFactory.getDomainObject(ims.oncology.domain.objects.PathologyDetails.class, id);
// TODO: Not sure how this should be handled. Effectively it must be a staleobject exception,
// but maybe should be handled as that further up.
if (domainObject == null) return null;
domMap.put(key, domainObject);
}
domainObject.setVersion(valueObject.getVersion_PathologyDetails());
domainObject.setInvasiveLesionSize(valueObject.getInvasiveLesionSize());
// create LookupInstance from vo LookupType
ims.domain.lookups.LookupInstance value2 = null;
if (null != valueObject.getSynchronousTumourIndicator()) {
value2 = domainFactory.getLookupInstance(valueObject.getSynchronousTumourIndicator().getID());
}
domainObject.setSynchronousTumourIndicator(value2);
domainObject.setHistology(
ims.clinicaladmin.vo.domain.TumourHistologyLiteVoAssembler.extractTumourHistologySet(
domainFactory, valueObject.getHistology(), domainObject.getHistology(), domMap));
// create LookupInstance from vo LookupType
ims.domain.lookups.LookupInstance value4 = null;
if (null != valueObject.getVascularLymphInvasion()) {
value4 = domainFactory.getLookupInstance(valueObject.getVascularLymphInvasion().getID());
}
domainObject.setVascularLymphInvasion(value4);
// create LookupInstance from vo LookupType
ims.domain.lookups.LookupInstance value5 = null;
if (null != valueObject.getExcisionMargin()) {
value5 = domainFactory.getLookupInstance(valueObject.getExcisionMargin().getID());
}
domainObject.setExcisionMargin(value5);
domainObject.setNumberNodesExamined(valueObject.getNumberNodesExamined());
domainObject.setNodesPositiveNumber(valueObject.getNodesPositiveNumber());
domainObject.setPathologicalTVal(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler
.extractTumourGroupSiteTNMValue(
domainFactory, valueObject.getPathologicalTVal(), domMap));
domainObject.setPathologicalNVal(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler
.extractTumourGroupSiteTNMValue(
domainFactory, valueObject.getPathologicalNVal(), domMap));
domainObject.setPathologicalMVal(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler
.extractTumourGroupSiteTNMValue(
domainFactory, valueObject.getPathologicalMVal(), domMap));
domainObject.setPathologicalOverall(
ims.clinicaladmin.vo.domain.TumourGroupSiteOverallStagingVoAssembler
.extractTumourGroupSiteOverallStaging(
domainFactory, valueObject.getPathologicalOverall(), domMap));
// This is to overcome a bug in both Sybase and Oracle which prevents them from storing an empty
// string correctly
// Sybase stores it as a single space, Oracle stores it as NULL. This fix will make them
// consistent at least.
if (valueObject.getServiceReportId() != null && valueObject.getServiceReportId().equals("")) {
valueObject.setServiceReportId(null);
}
domainObject.setServiceReportId(valueObject.getServiceReportId());
// create LookupInstance from vo LookupType
ims.domain.lookups.LookupInstance value13 = null;
if (null != valueObject.getServiceReportStatus()) {
value13 = domainFactory.getLookupInstance(valueObject.getServiceReportStatus().getID());
}
domainObject.setServiceReportStatus(value13);
// create LookupInstance from vo LookupType
ims.domain.lookups.LookupInstance value14 = null;
if (null != valueObject.getSpecimenNature()) {
value14 = domainFactory.getLookupInstance(valueObject.getSpecimenNature().getID());
}
domainObject.setSpecimenNature(value14);
domainObject.setOrgaCodeRequester(
ims.core.vo.domain.OrgLiteVoAssembler.extractOrganisation(
domainFactory, valueObject.getOrgaCodeRequester(), domMap));
domainObject.setCareProfCodeRequester(
ims.core.vo.domain.HcpLiteVoAssembler.extractHcp(
domainFactory, (ims.core.vo.HcpLiteVo) valueObject.getCareProfCodeRequester(), domMap));
domainObject.setTCategoryExtended(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler
.extractTumourGroupSiteTNMValueSet(
domainFactory,
valueObject.getTCategoryExtended(),
domainObject.getTCategoryExtended(),
domMap));
domainObject.setMCategoryExtended(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler
.extractTumourGroupSiteTNMValueSet(
domainFactory,
valueObject.getMCategoryExtended(),
domainObject.getMCategoryExtended(),
domMap));
// create LookupInstance from vo LookupType
ims.domain.lookups.LookupInstance value19 = null;
if (null != valueObject.getStatus()) {
value19 = domainFactory.getLookupInstance(valueObject.getStatus().getID());
}
domainObject.setStatus(value19);
domainObject.setAuthoringInformation(
ims.core.vo.domain.AuthoringInformationVoAssembler.extractAuthoringInformation(
domainFactory, valueObject.getAuthoringInformation(), domMap));
domainObject.setAssociatedQuestions(
ims.assessment.vo.domain.PatientAssessmentVoAssembler.extractPatientAssessment(
domainFactory, valueObject.getAssociatedQuestions(), domMap));
domainObject.setAssociatiatedTumourDetails(
ims.oncology.vo.domain.PrimaryTumourDetailsShortVoAssembler.extractPrimaryTumourDetails(
domainFactory, valueObject.getAssociatiatedTumourDetails(), domMap));
domainObject.setGradeOfDifferentation(
ims.clinicaladmin.vo.domain.TumourGroupHistopathologyGradeVoAssembler
.extractTumourGroupHistopathologicGrade(
domainFactory, valueObject.getGradeOfDifferentation(), domMap));
// create LookupInstance from vo LookupType
ims.domain.lookups.LookupInstance value24 = null;
if (null != valueObject.getInvestigationType()) {
value24 = domainFactory.getLookupInstance(valueObject.getInvestigationType().getID());
}
domainObject.setInvestigationType(value24);
java.util.Date value25 = null;
ims.framework.utils.Date date25 = valueObject.getSampleReceiptDate();
if (date25 != null) {
value25 = date25.getDate();
}
domainObject.setSampleReceiptDate(value25);
java.util.Date value26 = null;
ims.framework.utils.Date date26 = valueObject.getInvestigationResultDate();
if (date26 != null) {
value26 = date26.getDate();
}
domainObject.setInvestigationResultDate(value26);
domainObject.setReportingConsultantCode(
ims.core.vo.domain.HcpLiteVoAssembler.extractHcp(
domainFactory,
(ims.core.vo.HcpLiteVo) valueObject.getReportingConsultantCode(),
domMap));
domainObject.setReportingOrganisation(
ims.core.vo.domain.OrgLiteVoAssembler.extractOrganisation(
domainFactory, valueObject.getReportingOrganisation(), domMap));
ims.core.admin.domain.objects.CareContext value29 = null;
if (null != valueObject.getCareContext()) {
if (valueObject.getCareContext().getBoId() == null) {
if (domMap.get(valueObject.getCareContext()) != null) {
value29 =
(ims.core.admin.domain.objects.CareContext) domMap.get(valueObject.getCareContext());
}
} else if (valueObject.getBoVersion()
== -1) // RefVo was not modified since obtained from the Assembler, no need to update the
// BO field
{
value29 = domainObject.getCareContext();
} else {
value29 =
(ims.core.admin.domain.objects.CareContext)
domainFactory.getDomainObject(
ims.core.admin.domain.objects.CareContext.class,
valueObject.getCareContext().getBoId());
}
}
domainObject.setCareContext(value29);
ims.oncology.domain.objects.PathologyDetails value30 = null;
if (null != valueObject.getPreviousVersion()) {
if (valueObject.getPreviousVersion().getBoId() == null) {
if (domMap.get(valueObject.getPreviousVersion()) != null) {
value30 =
(ims.oncology.domain.objects.PathologyDetails)
domMap.get(valueObject.getPreviousVersion());
}
} else if (valueObject.getBoVersion()
== -1) // RefVo was not modified since obtained from the Assembler, no need to update the
// BO field
{
value30 = domainObject.getPreviousVersion();
} else {
value30 =
(ims.oncology.domain.objects.PathologyDetails)
domainFactory.getDomainObject(
ims.oncology.domain.objects.PathologyDetails.class,
valueObject.getPreviousVersion().getBoId());
}
}
domainObject.setPreviousVersion(value30);
return domainObject;
}
public static ims.oncology.configuration.domain.objects.TumourGroup extractTumourGroup(
ims.domain.ILightweightDomainFactory domainFactory,
ims.clinicaladmin.vo.TumourGroupListForPrimaryTumourDetailsVo valueObject,
HashMap domMap) {
if (null == valueObject) {
return null;
}
Integer id = valueObject.getID_TumourGroup();
ims.oncology.configuration.domain.objects.TumourGroup domainObject = null;
if (null == id) {
if (domMap.get(valueObject) != null) {
return (ims.oncology.configuration.domain.objects.TumourGroup) domMap.get(valueObject);
}
// ims.clinicaladmin.vo.TumourGroupListForPrimaryTumourDetailsVo ID_TumourGroup field is
// unknown
domainObject = new ims.oncology.configuration.domain.objects.TumourGroup();
domMap.put(valueObject, domainObject);
} else {
String key = (valueObject.getClass().getName() + "__" + valueObject.getID_TumourGroup());
if (domMap.get(key) != null) {
return (ims.oncology.configuration.domain.objects.TumourGroup) domMap.get(key);
}
domainObject =
(ims.oncology.configuration.domain.objects.TumourGroup)
domainFactory.getDomainObject(
ims.oncology.configuration.domain.objects.TumourGroup.class, id);
// TODO: Not sure how this should be handled. Effectively it must be a staleobject exception,
// but maybe should be handled as that further up.
if (domainObject == null) return null;
domMap.put(key, domainObject);
}
domainObject.setVersion(valueObject.getVersion_TumourGroup());
// This is to overcome a bug in both Sybase and Oracle which prevents them from storing an empty
// string correctly
// Sybase stores it as a single space, Oracle stores it as NULL. This fix will make them
// consistent at least.
if (valueObject.getGroupName() != null && valueObject.getGroupName().equals("")) {
valueObject.setGroupName(null);
}
domainObject.setGroupName(valueObject.getGroupName());
domainObject.setSites(
ims.clinicaladmin.vo.domain.TumourSiteLiteVoAssembler.extractTumourSiteList(
domainFactory, valueObject.getSites(), domainObject.getSites(), domMap));
domainObject.setTnmRequiresOver45(valueObject.getTnmRequiresOver45());
domainObject.setIsActive(valueObject.getIsActive());
domainObject.setTNMValues(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueListVoAssembler
.extractTumourGroupSiteTNMValueList(
domainFactory, valueObject.getTNMValues(), domainObject.getTNMValues(), domMap));
domainObject.setSerumMarkers(
ims.clinicaladmin.vo.domain.TumourSerumMarkersVoAssembler.extractTumourSerumMarkerSet(
domainFactory, valueObject.getSerumMarkers(), domainObject.getSerumMarkers(), domMap));
domainObject.setOtherClassifications(
ims.oncology.vo.domain.TumourGroupClassificationVoAssembler
.extractTumourGroupClassificationSet(
domainFactory,
valueObject.getOtherClassifications(),
domainObject.getOtherClassifications(),
domMap));
domainObject.setAssociatedSpecialties(
ims.oncology.vo.domain.TumourGroupSpecialtyVoAssembler.extractTumourGroupSpecialtySet(
domainFactory,
valueObject.getAssociatedSpecialties(),
domainObject.getAssociatedSpecialties(),
domMap));
domainObject.setHasTNM(valueObject.getHasTNM());
// SaveAsRefVO treated as RefValueObject
ims.oncology.configuration.vo.TumourGroupHistologyRefVoCollection refCollection10 =
new ims.oncology.configuration.vo.TumourGroupHistologyRefVoCollection();
if (valueObject.getHistologies() != null) {
for (int i10 = 0; i10 < valueObject.getHistologies().size(); i10++) {
ims.oncology.configuration.vo.TumourGroupHistologyRefVo ref10 =
(ims.oncology.configuration.vo.TumourGroupHistologyRefVo)
valueObject.getHistologies().get(i10);
refCollection10.add(ref10);
}
}
int size10 = (null == refCollection10) ? 0 : refCollection10.size();
java.util.List domainHistologies10 = domainObject.getHistologies();
if (domainHistologies10 == null) {
domainHistologies10 = new java.util.ArrayList();
}
for (int i = 0; i < size10; i++) {
ims.oncology.configuration.vo.TumourGroupHistologyRefVo vo = refCollection10.get(i);
ims.oncology.configuration.domain.objects.TumourGroupHistology dom = null;
if (null != vo) {
if (vo.getBoId() == null) {
if (domMap.get(vo) != null) {
dom = (ims.oncology.configuration.domain.objects.TumourGroupHistology) domMap.get(vo);
}
} else {
dom =
(ims.oncology.configuration.domain.objects.TumourGroupHistology)
domainFactory.getDomainObject(
ims.oncology.configuration.domain.objects.TumourGroupHistology.class,
vo.getBoId());
}
}
int domIdx = domainHistologies10.indexOf(dom);
if (domIdx == -1) {
domainHistologies10.add(i, dom);
} else if (i != domIdx && i < domainHistologies10.size()) {
Object tmp = domainHistologies10.get(i);
domainHistologies10.set(i, domainHistologies10.get(domIdx));
domainHistologies10.set(domIdx, tmp);
}
}
// Remove all ones in domList where index > voCollection.size() as these should
// now represent the ones removed from the VO collection. No longer referenced.
int i10 = domainHistologies10.size();
while (i10 > size10) {
domainHistologies10.remove(i10 - 1);
i10 = domainHistologies10.size();
}
domainObject.setHistologies(domainHistologies10);
domainObject.setHistopathologicGrades(
ims.clinicaladmin.vo.domain.TumourGroupHistopathologyGradeVoAssembler
.extractTumourGroupHistopathologicGradeSet(
domainFactory,
valueObject.getHistopathologicGrades(),
domainObject.getHistopathologicGrades(),
domMap));
ims.assessment.configuration.domain.objects.UserAssessment value12 = null;
if (null != valueObject.getAssessment()) {
if (valueObject.getAssessment().getBoId() == null) {
if (domMap.get(valueObject.getAssessment()) != null) {
value12 =
(ims.assessment.configuration.domain.objects.UserAssessment)
domMap.get(valueObject.getAssessment());
}
} else if (valueObject.getBoVersion()
== -1) // RefVo was not modified since obtained from the Assembler, no need to update the
// BO field
{
value12 = domainObject.getAssessment();
} else {
value12 =
(ims.assessment.configuration.domain.objects.UserAssessment)
domainFactory.getDomainObject(
ims.assessment.configuration.domain.objects.UserAssessment.class,
valueObject.getAssessment().getBoId());
}
}
domainObject.setAssessment(value12);
domainObject.setIsPrognosticGroupingRelevant(valueObject.getIsPrognosticGroupingRelevant());
// SaveAsRefVO - treated as a refVo in extract methods
ims.oncology.configuration.domain.objects.PrognosticGroupingConfig value14 = null;
if (null != valueObject.getPrognosticGroupingConfig()) {
if (valueObject.getPrognosticGroupingConfig().getBoId() == null) {
if (domMap.get(valueObject.getPrognosticGroupingConfig()) != null) {
value14 =
(ims.oncology.configuration.domain.objects.PrognosticGroupingConfig)
domMap.get(valueObject.getPrognosticGroupingConfig());
}
} else {
value14 =
(ims.oncology.configuration.domain.objects.PrognosticGroupingConfig)
domainFactory.getDomainObject(
ims.oncology.configuration.domain.objects.PrognosticGroupingConfig.class,
valueObject.getPrognosticGroupingConfig().getBoId());
}
}
domainObject.setPrognosticGroupingConfig(value14);
domainObject.setTnmRequiresDiff(valueObject.getTnmRequiresDiff());
domainObject.setTnmRequiresHisto(valueObject.getTnmRequiresHisto());
domainObject.setTnmRequiresSMarkers(valueObject.getTnmRequiresSMarkers());
return domainObject;
}
/**
* Update the ValueObject with the Domain Object.
*
* @param map DomainObjectMap of DomainObjects to already created ValueObjects.
* @param valueObject to be updated
* @param domainObject ims.oncology.domain.objects.PathologyDetails
*/
public static ims.clinicaladmin.vo.PathologyDetailsVo insert(
DomainObjectMap map,
ims.clinicaladmin.vo.PathologyDetailsVo valueObject,
ims.oncology.domain.objects.PathologyDetails domainObject) {
if (null == domainObject) {
return valueObject;
}
if (null == map) {
map = new DomainObjectMap();
}
valueObject.setID_PathologyDetails(domainObject.getId());
valueObject.setIsRIE(domainObject.getIsRIE());
// If this is a recordedInError record, and the domainObject
// value isIncludeRecord has not been set, then we return null and
// not the value object
if (valueObject.getIsRIE() != null
&& valueObject.getIsRIE().booleanValue() == true
&& !domainObject.isIncludeRecord()) return null;
// If this is not a recordedInError record, and the domainObject
// value isIncludeRecord has been set, then we return null and
// not the value object
if ((valueObject.getIsRIE() == null || valueObject.getIsRIE().booleanValue() == false)
&& domainObject.isIncludeRecord()) return null;
// InvasiveLesionSize
valueObject.setInvasiveLesionSize(domainObject.getInvasiveLesionSize());
// SynchronousTumourIndicator
ims.domain.lookups.LookupInstance instance2 = domainObject.getSynchronousTumourIndicator();
if (null != instance2) {
ims.framework.utils.ImagePath img = null;
ims.framework.utils.Color color = null;
img = null;
if (instance2.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
instance2.getImage().getImageId(), instance2.getImage().getImagePath());
}
color = instance2.getColor();
if (color != null) color.getValue();
ims.oncology.vo.lookups.SynchronousTumourIndicator voLookup2 =
new ims.oncology.vo.lookups.SynchronousTumourIndicator(
instance2.getId(), instance2.getText(), instance2.isActive(), null, img, color);
ims.oncology.vo.lookups.SynchronousTumourIndicator parentVoLookup2 = voLookup2;
ims.domain.lookups.LookupInstance parent2 = instance2.getParent();
while (parent2 != null) {
if (parent2.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
parent2.getImage().getImageId(), parent2.getImage().getImagePath());
} else {
img = null;
}
color = parent2.getColor();
if (color != null) color.getValue();
parentVoLookup2.setParent(
new ims.oncology.vo.lookups.SynchronousTumourIndicator(
parent2.getId(), parent2.getText(), parent2.isActive(), null, img, color));
parentVoLookup2 = parentVoLookup2.getParent();
parent2 = parent2.getParent();
}
valueObject.setSynchronousTumourIndicator(voLookup2);
}
// Histology
valueObject.setHistology(
ims.clinicaladmin.vo.domain.TumourHistologyLiteVoAssembler
.createTumourHistologyLiteVoCollectionFromTumourHistology(
map, domainObject.getHistology()));
// VascularLymphInvasion
ims.domain.lookups.LookupInstance instance4 = domainObject.getVascularLymphInvasion();
if (null != instance4) {
ims.framework.utils.ImagePath img = null;
ims.framework.utils.Color color = null;
img = null;
if (instance4.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
instance4.getImage().getImageId(), instance4.getImage().getImagePath());
}
color = instance4.getColor();
if (color != null) color.getValue();
ims.oncology.vo.lookups.VascularLymphInvasion voLookup4 =
new ims.oncology.vo.lookups.VascularLymphInvasion(
instance4.getId(), instance4.getText(), instance4.isActive(), null, img, color);
ims.oncology.vo.lookups.VascularLymphInvasion parentVoLookup4 = voLookup4;
ims.domain.lookups.LookupInstance parent4 = instance4.getParent();
while (parent4 != null) {
if (parent4.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
parent4.getImage().getImageId(), parent4.getImage().getImagePath());
} else {
img = null;
}
color = parent4.getColor();
if (color != null) color.getValue();
parentVoLookup4.setParent(
new ims.oncology.vo.lookups.VascularLymphInvasion(
parent4.getId(), parent4.getText(), parent4.isActive(), null, img, color));
parentVoLookup4 = parentVoLookup4.getParent();
parent4 = parent4.getParent();
}
valueObject.setVascularLymphInvasion(voLookup4);
}
// ExcisionMargin
ims.domain.lookups.LookupInstance instance5 = domainObject.getExcisionMargin();
if (null != instance5) {
ims.framework.utils.ImagePath img = null;
ims.framework.utils.Color color = null;
img = null;
if (instance5.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
instance5.getImage().getImageId(), instance5.getImage().getImagePath());
}
color = instance5.getColor();
if (color != null) color.getValue();
ims.oncology.vo.lookups.ExcisionMargin voLookup5 =
new ims.oncology.vo.lookups.ExcisionMargin(
instance5.getId(), instance5.getText(), instance5.isActive(), null, img, color);
ims.oncology.vo.lookups.ExcisionMargin parentVoLookup5 = voLookup5;
ims.domain.lookups.LookupInstance parent5 = instance5.getParent();
while (parent5 != null) {
if (parent5.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
parent5.getImage().getImageId(), parent5.getImage().getImagePath());
} else {
img = null;
}
color = parent5.getColor();
if (color != null) color.getValue();
parentVoLookup5.setParent(
new ims.oncology.vo.lookups.ExcisionMargin(
parent5.getId(), parent5.getText(), parent5.isActive(), null, img, color));
parentVoLookup5 = parentVoLookup5.getParent();
parent5 = parent5.getParent();
}
valueObject.setExcisionMargin(voLookup5);
}
// NumberNodesExamined
valueObject.setNumberNodesExamined(domainObject.getNumberNodesExamined());
// NodesPositiveNumber
valueObject.setNodesPositiveNumber(domainObject.getNodesPositiveNumber());
// PathologicalTVal
valueObject.setPathologicalTVal(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler.create(
map, domainObject.getPathologicalTVal()));
// PathologicalNVal
valueObject.setPathologicalNVal(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler.create(
map, domainObject.getPathologicalNVal()));
// PathologicalMVal
valueObject.setPathologicalMVal(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler.create(
map, domainObject.getPathologicalMVal()));
// PathologicalOverall
valueObject.setPathologicalOverall(
ims.clinicaladmin.vo.domain.TumourGroupSiteOverallStagingVoAssembler.create(
map, domainObject.getPathologicalOverall()));
// ServiceReportId
valueObject.setServiceReportId(domainObject.getServiceReportId());
// ServiceReportStatus
ims.domain.lookups.LookupInstance instance13 = domainObject.getServiceReportStatus();
if (null != instance13) {
ims.framework.utils.ImagePath img = null;
ims.framework.utils.Color color = null;
img = null;
if (instance13.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
instance13.getImage().getImageId(), instance13.getImage().getImagePath());
}
color = instance13.getColor();
if (color != null) color.getValue();
ims.oncology.vo.lookups.ServiceReportStatus voLookup13 =
new ims.oncology.vo.lookups.ServiceReportStatus(
instance13.getId(), instance13.getText(), instance13.isActive(), null, img, color);
ims.oncology.vo.lookups.ServiceReportStatus parentVoLookup13 = voLookup13;
ims.domain.lookups.LookupInstance parent13 = instance13.getParent();
while (parent13 != null) {
if (parent13.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
parent13.getImage().getImageId(), parent13.getImage().getImagePath());
} else {
img = null;
}
color = parent13.getColor();
if (color != null) color.getValue();
parentVoLookup13.setParent(
new ims.oncology.vo.lookups.ServiceReportStatus(
parent13.getId(), parent13.getText(), parent13.isActive(), null, img, color));
parentVoLookup13 = parentVoLookup13.getParent();
parent13 = parent13.getParent();
}
valueObject.setServiceReportStatus(voLookup13);
}
// SpecimenNature
ims.domain.lookups.LookupInstance instance14 = domainObject.getSpecimenNature();
if (null != instance14) {
ims.framework.utils.ImagePath img = null;
ims.framework.utils.Color color = null;
img = null;
if (instance14.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
instance14.getImage().getImageId(), instance14.getImage().getImagePath());
}
color = instance14.getColor();
if (color != null) color.getValue();
ims.oncology.vo.lookups.SpecimenNature voLookup14 =
new ims.oncology.vo.lookups.SpecimenNature(
instance14.getId(), instance14.getText(), instance14.isActive(), null, img, color);
ims.oncology.vo.lookups.SpecimenNature parentVoLookup14 = voLookup14;
ims.domain.lookups.LookupInstance parent14 = instance14.getParent();
while (parent14 != null) {
if (parent14.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
parent14.getImage().getImageId(), parent14.getImage().getImagePath());
} else {
img = null;
}
color = parent14.getColor();
if (color != null) color.getValue();
parentVoLookup14.setParent(
new ims.oncology.vo.lookups.SpecimenNature(
parent14.getId(), parent14.getText(), parent14.isActive(), null, img, color));
parentVoLookup14 = parentVoLookup14.getParent();
parent14 = parent14.getParent();
}
valueObject.setSpecimenNature(voLookup14);
}
// OrgaCodeRequester
valueObject.setOrgaCodeRequester(
ims.core.vo.domain.OrgLiteVoAssembler.create(map, domainObject.getOrgaCodeRequester()));
// CareProfCodeRequester
valueObject.setCareProfCodeRequester(
(ims.core.vo.HcpLiteVo)
ims.core.vo.domain.HcpLiteVoAssembler.create(
map, domainObject.getCareProfCodeRequester()));
// TCategoryExtended
valueObject.setTCategoryExtended(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler
.createTumourGroupSiteTNMValueVoCollectionFromTumourGroupSiteTNMValue(
map, domainObject.getTCategoryExtended()));
// MCategoryExtended
valueObject.setMCategoryExtended(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueVoAssembler
.createTumourGroupSiteTNMValueVoCollectionFromTumourGroupSiteTNMValue(
map, domainObject.getMCategoryExtended()));
// Status
ims.domain.lookups.LookupInstance instance19 = domainObject.getStatus();
if (null != instance19) {
ims.framework.utils.ImagePath img = null;
ims.framework.utils.Color color = null;
img = null;
if (instance19.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
instance19.getImage().getImageId(), instance19.getImage().getImagePath());
}
color = instance19.getColor();
if (color != null) color.getValue();
ims.oncology.vo.lookups.HistopathologyReportStatus voLookup19 =
new ims.oncology.vo.lookups.HistopathologyReportStatus(
instance19.getId(), instance19.getText(), instance19.isActive(), null, img, color);
ims.oncology.vo.lookups.HistopathologyReportStatus parentVoLookup19 = voLookup19;
ims.domain.lookups.LookupInstance parent19 = instance19.getParent();
while (parent19 != null) {
if (parent19.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
parent19.getImage().getImageId(), parent19.getImage().getImagePath());
} else {
img = null;
}
color = parent19.getColor();
if (color != null) color.getValue();
parentVoLookup19.setParent(
new ims.oncology.vo.lookups.HistopathologyReportStatus(
parent19.getId(), parent19.getText(), parent19.isActive(), null, img, color));
parentVoLookup19 = parentVoLookup19.getParent();
parent19 = parent19.getParent();
}
valueObject.setStatus(voLookup19);
}
// AuthoringInformation
valueObject.setAuthoringInformation(
ims.core.vo.domain.AuthoringInformationVoAssembler.create(
map, domainObject.getAuthoringInformation()));
// AssociatedQuestions
valueObject.setAssociatedQuestions(
ims.assessment.vo.domain.PatientAssessmentVoAssembler.create(
map, domainObject.getAssociatedQuestions()));
// AssociatiatedTumourDetails
valueObject.setAssociatiatedTumourDetails(
ims.oncology.vo.domain.PrimaryTumourDetailsShortVoAssembler.create(
map, domainObject.getAssociatiatedTumourDetails()));
// GradeOfDifferentation
valueObject.setGradeOfDifferentation(
ims.clinicaladmin.vo.domain.TumourGroupHistopathologyGradeVoAssembler.create(
map, domainObject.getGradeOfDifferentation()));
// InvestigationType
ims.domain.lookups.LookupInstance instance24 = domainObject.getInvestigationType();
if (null != instance24) {
ims.framework.utils.ImagePath img = null;
ims.framework.utils.Color color = null;
img = null;
if (instance24.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
instance24.getImage().getImageId(), instance24.getImage().getImagePath());
}
color = instance24.getColor();
if (color != null) color.getValue();
ims.oncology.vo.lookups.InvestigationType voLookup24 =
new ims.oncology.vo.lookups.InvestigationType(
instance24.getId(), instance24.getText(), instance24.isActive(), null, img, color);
ims.oncology.vo.lookups.InvestigationType parentVoLookup24 = voLookup24;
ims.domain.lookups.LookupInstance parent24 = instance24.getParent();
while (parent24 != null) {
if (parent24.getImage() != null) {
img =
new ims.framework.utils.ImagePath(
parent24.getImage().getImageId(), parent24.getImage().getImagePath());
} else {
img = null;
}
color = parent24.getColor();
if (color != null) color.getValue();
parentVoLookup24.setParent(
new ims.oncology.vo.lookups.InvestigationType(
parent24.getId(), parent24.getText(), parent24.isActive(), null, img, color));
parentVoLookup24 = parentVoLookup24.getParent();
parent24 = parent24.getParent();
}
valueObject.setInvestigationType(voLookup24);
}
// SampleReceiptDate
java.util.Date SampleReceiptDate = domainObject.getSampleReceiptDate();
if (null != SampleReceiptDate) {
valueObject.setSampleReceiptDate(new ims.framework.utils.Date(SampleReceiptDate));
}
// InvestigationResultDate
java.util.Date InvestigationResultDate = domainObject.getInvestigationResultDate();
if (null != InvestigationResultDate) {
valueObject.setInvestigationResultDate(new ims.framework.utils.Date(InvestigationResultDate));
}
// ReportingConsultantCode
valueObject.setReportingConsultantCode(
(ims.core.vo.HcpLiteVo)
ims.core.vo.domain.HcpLiteVoAssembler.create(
map, domainObject.getReportingConsultantCode()));
// ReportingOrganisation
valueObject.setReportingOrganisation(
ims.core.vo.domain.OrgLiteVoAssembler.create(map, domainObject.getReportingOrganisation()));
// CareContext
if (domainObject.getCareContext() != null) {
if (domainObject.getCareContext()
instanceof
HibernateProxy) // If the proxy is set, there is no need to lazy load, the proxy knows the
// id already.
{
HibernateProxy p = (HibernateProxy) domainObject.getCareContext();
int id = Integer.parseInt(p.getHibernateLazyInitializer().getIdentifier().toString());
valueObject.setCareContext(new ims.core.admin.vo.CareContextRefVo(id, -1));
} else {
valueObject.setCareContext(
new ims.core.admin.vo.CareContextRefVo(
domainObject.getCareContext().getId(), domainObject.getCareContext().getVersion()));
}
}
// PreviousVersion
if (domainObject.getPreviousVersion() != null) {
if (domainObject.getPreviousVersion()
instanceof
HibernateProxy) // If the proxy is set, there is no need to lazy load, the proxy knows the
// id already.
{
HibernateProxy p = (HibernateProxy) domainObject.getPreviousVersion();
int id = Integer.parseInt(p.getHibernateLazyInitializer().getIdentifier().toString());
valueObject.setPreviousVersion(new ims.oncology.vo.PathologyDetailsRefVo(id, -1));
} else {
valueObject.setPreviousVersion(
new ims.oncology.vo.PathologyDetailsRefVo(
domainObject.getPreviousVersion().getId(),
domainObject.getPreviousVersion().getVersion()));
}
}
return valueObject;
}
/**
* Update the ValueObject with the Domain Object.
*
* @param map DomainObjectMap of DomainObjects to already created ValueObjects.
* @param valueObject to be updated
* @param domainObject ims.oncology.configuration.domain.objects.TumourGroup
*/
public static ims.clinicaladmin.vo.TumourGroupListForPrimaryTumourDetailsVo insert(
DomainObjectMap map,
ims.clinicaladmin.vo.TumourGroupListForPrimaryTumourDetailsVo valueObject,
ims.oncology.configuration.domain.objects.TumourGroup domainObject) {
if (null == domainObject) {
return valueObject;
}
if (null == map) {
map = new DomainObjectMap();
}
valueObject.setID_TumourGroup(domainObject.getId());
valueObject.setIsRIE(domainObject.getIsRIE());
// If this is a recordedInError record, and the domainObject
// value isIncludeRecord has not been set, then we return null and
// not the value object
if (valueObject.getIsRIE() != null
&& valueObject.getIsRIE().booleanValue() == true
&& !domainObject.isIncludeRecord()) return null;
// If this is not a recordedInError record, and the domainObject
// value isIncludeRecord has been set, then we return null and
// not the value object
if ((valueObject.getIsRIE() == null || valueObject.getIsRIE().booleanValue() == false)
&& domainObject.isIncludeRecord()) return null;
// GroupName
valueObject.setGroupName(domainObject.getGroupName());
// Sites
valueObject.setSites(
ims.clinicaladmin.vo.domain.TumourSiteLiteVoAssembler
.createTumourSiteLiteVoCollectionFromTumourSite(map, domainObject.getSites()));
// TnmRequiresOver45
valueObject.setTnmRequiresOver45(domainObject.isTnmRequiresOver45());
// isActive
valueObject.setIsActive(domainObject.isIsActive());
// TNMValues
valueObject.setTNMValues(
ims.clinicaladmin.vo.domain.TumourGroupSiteTNMValueListVoAssembler
.createTumourGroupSiteTNMValueListVoCollectionFromTumourGroupSiteTNMValue(
map, domainObject.getTNMValues()));
// SerumMarkers
valueObject.setSerumMarkers(
ims.clinicaladmin.vo.domain.TumourSerumMarkersVoAssembler
.createTumourSerumMarkersVoCollectionFromTumourSerumMarker(
map, domainObject.getSerumMarkers()));
// OtherClassifications
valueObject.setOtherClassifications(
ims.oncology.vo.domain.TumourGroupClassificationVoAssembler
.createTumourGroupClassificationVoCollectionFromTumourGroupClassification(
map, domainObject.getOtherClassifications()));
// AssociatedSpecialties
valueObject.setAssociatedSpecialties(
ims.oncology.vo.domain.TumourGroupSpecialtyVoAssembler
.createTumourGroupSpecialtyVoCollectionFromTumourGroupSpecialty(
map, domainObject.getAssociatedSpecialties()));
// hasTNM
valueObject.setHasTNM(domainObject.isHasTNM());
// Histologies
valueObject.setHistologies(
ims.clinicaladmin.vo.domain.TumourGroupHistologyVoAssembler
.createTumourGroupHistologyVoCollectionFromTumourGroupHistology(
map, domainObject.getHistologies()));
// HistopathologicGrades
valueObject.setHistopathologicGrades(
ims.clinicaladmin.vo.domain.TumourGroupHistopathologyGradeVoAssembler
.createTumourGroupHistopathologyGradeVoCollectionFromTumourGroupHistopathologicGrade(
map, domainObject.getHistopathologicGrades()));
// Assessment
if (domainObject.getAssessment() != null) {
if (domainObject.getAssessment()
instanceof
HibernateProxy) // If the proxy is set, there is no need to lazy load, the proxy knows the
// id already.
{
HibernateProxy p = (HibernateProxy) domainObject.getAssessment();
int id = Integer.parseInt(p.getHibernateLazyInitializer().getIdentifier().toString());
valueObject.setAssessment(new ims.assessment.configuration.vo.UserAssessmentRefVo(id, -1));
} else {
valueObject.setAssessment(
new ims.assessment.configuration.vo.UserAssessmentRefVo(
domainObject.getAssessment().getId(), domainObject.getAssessment().getVersion()));
}
}
// isPrognosticGroupingRelevant
valueObject.setIsPrognosticGroupingRelevant(domainObject.isIsPrognosticGroupingRelevant());
// PrognosticGroupingConfig
valueObject.setPrognosticGroupingConfig(
ims.clinicaladmin.vo.domain.PrognosticGroupingCongfigVoAssembler.create(
map, domainObject.getPrognosticGroupingConfig()));
// TnmRequiresDiff
valueObject.setTnmRequiresDiff(domainObject.isTnmRequiresDiff());
// TnmRequiresHisto
valueObject.setTnmRequiresHisto(domainObject.isTnmRequiresHisto());
// TnmRequiresSMarkers
valueObject.setTnmRequiresSMarkers(domainObject.isTnmRequiresSMarkers());
return valueObject;
}