@Override
public Object getValueAt(int row, int column) {
PSParameter pSParameter = new PSParameter();
try {
pSParameter =
(PSParameter)
identification.getProteinMatchParameter(associatedMatches.get(row), pSParameter);
} catch (Exception e) {
peptideShakerGUI.catchException(e);
}
switch (column) {
case 0:
return (row + 1);
case 1:
return peptideShakerGUI
.getIdentificationFeaturesGenerator()
.addDatabaseLinks(
new ArrayList<String>(
Arrays.asList(ProteinMatch.getAccessions(associatedMatches.get(row)))));
case 2:
return pSParameter.getProteinScore();
case 3:
return pSParameter.getProteinConfidence();
case 4:
return pSParameter.isValidated();
default:
return "";
}
}
