/** @return */
public TreeMap<Integer, Double> GetWinDiffPerLayer() throws Exception {
SimpleFileDataSource ref = (SimpleFileDataSource) this.refDS;
SimpleFileDataSource hypo = (SimpleFileDataSource) this.hypoDS;
TreeMap<Integer, Double> res = new TreeMap<Integer, Double>();
Set<Integer> levels = ref.GetReferenceBreaksHierarchical().keySet();
for (Integer curLevel : levels) {
ArrayList<Integer> curRef = ref.GetReferenceBreaksAtLevel(0, curLevel);
ArrayList<Integer> curHypo = null;
try {
curHypo = hypo.GetReferenceBreaksAtLevel(0, curLevel);
} catch (Exception e) {
System.out.println("Error getting level in hypo: " + curLevel);
e.printStackTrace();
continue;
}
if (curHypo == null) continue;
Double value = this.ComputeWindowDiff(curRef, curHypo);
res.put(curLevel, value);
}
return res;
}
/**
* this method generates gold standard and opts files
*
* @throws Exception
*/
public void SetUp(File tmpDir, String algorithmName) throws Exception {
if (tmpDir.exists() == false || tmpDir.isDirectory() == false) tmpDir.mkdir();
SimpleFileDataSource ref = (SimpleFileDataSource) this.refDS;
SimpleFileDataSource hypo = (SimpleFileDataSource) this.hypoDS;
String goldStandardName = ref.GetShortName() + ".ref.txt";
String hypoName = ref.GetShortName() + ".hypo.txt";
String optsName = ref.GetShortName() + ".opts.txt";
// String resultsName = ref.GetShortName() + ".results.txt";
File goldStandardFile = new File(tmpDir, goldStandardName);
File hypoFile = new File(tmpDir, hypoName);
File optsFile = new File(tmpDir, optsName);
if (goldStandardFile.exists()) goldStandardFile.delete();
if (hypoFile.exists()) hypoFile.delete();
if (optsFile.exists()) optsFile.delete();
// output gold standard file
// ds.OutputFullTextWithHypoBreaks(outputFile,haps.GetAllHypoBreaks());
ref.OutputFullTextHierarchical(goldStandardFile);
// output hypothetical segmentation
ref.OutputFullTextWithHypoBreaks(hypoFile, hypo.GetReferenceBreaksHierarchical());
// generate opts file for EvalHDS
this.GenerateEvalHDSOptFiles(optsFile, goldStandardFile, hypoFile, algorithmName);
this.optionsFile = optsFile;
}