Ejemplo n.º 1
0
  public PcrRegion next(String plate, int quadrantNumber, int numberOfRegions)
      throws PlateFullException {
    if (numberOfRegions == 0) {
      throw new IllegalArgumentException("Dna blocks has no reps setup properly");
    }
    if (!iterator.hasNext()) {
      throw new AllocationException("No more pcr wells available for allocation to the PcrRegion");
    }
    int numberOfWellsToAllocate = wellLocations.size() / numberOfRegions;

    LinkedList<PlateWellLocation> pcrRegionWells = new LinkedList<PlateWellLocation>();
    LinkedList<PlateWellLocation> dnaWells = new LinkedList<PlateWellLocation>();

    for (int i = 0; i < numberOfWellsToAllocate; i++) {
      pcrRegionWells.add(iterator.next());
    }
    for (int i = 0; i < numberOfWellsToAllocate; i++) {
      dnaWells.add(dnaLocations.next());
    }
    return new PcrRegion(plate, currentRegionNumber++, quadrantNumber, pcrRegionWells, dnaWells);
  }
Ejemplo n.º 2
0
 public PcrRegionAllocator(List<PlateWellLocation> wellLocations) {
   this.wellLocations = wellLocations;
   iterator = wellLocations.iterator();
   dnaLocations = PlateLocations.instance(UserPreferences.newInstance().getInt("dnaSource.type"));
 }