@Test
public void testServerReturnsWrongVersionForDstu2() throws Exception {
Conformance conf = new Conformance();
conf.setFhirVersion("0.80");
String msg = myCtx.newXmlParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpResponse.getStatusLine())
.thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType())
.thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_XML + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent())
.thenReturn(new ReaderInputStream(new StringReader(msg), Charset.forName("UTF-8")));
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
myCtx.getRestfulClientFactory().setServerValidationMode(ServerValidationModeEnum.ONCE);
try {
myCtx.newRestfulGenericClient("http://foo").read(new UriDt("http://foo/Patient/123"));
fail();
} catch (FhirClientInappropriateForServerException e) {
String out = e.toString();
String want =
"The server at base URL \"http://foo/metadata\" returned a conformance statement indicating that it supports FHIR version \"0.80\" which corresponds to DSTU1, but this client is configured to use DSTU2 (via the FhirContext)";
ourLog.info(out);
ourLog.info(want);
assertThat(out, containsString(want));
}
}
@Test
public void testServerReturnsAnHttp401() throws Exception {
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpResponse.getStatusLine())
.thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 401, "Unauthorized"));
when(myHttpResponse.getEntity().getContentType())
.thenReturn(new BasicHeader("content-type", Constants.CT_TEXT));
when(myHttpResponse.getEntity().getContent())
.thenAnswer(
new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
return new ReaderInputStream(
new StringReader("Unauthorized"), Charset.forName("UTF-8"));
}
});
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
IGenericClient client = myCtx.newRestfulGenericClient("http://foo");
try {
client.read().resource(Patient.class).withId("123").execute();
fail();
} catch (AuthenticationException e) {
// good
}
}
@Test
public void testTransaction() throws Exception {
String retVal = ourCtx.newXmlParser().encodeBundleToString(new Bundle());
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(ourHttpClient.execute(capt.capture())).thenReturn(ourHttpResponse);
when(ourHttpResponse.getStatusLine())
.thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(ourHttpResponse.getEntity().getContentType())
.thenReturn(new BasicHeader("content-type", Constants.CT_ATOM_XML + "; charset=UTF-8"));
when(ourHttpResponse.getEntity().getContent())
.thenReturn(new ReaderInputStream(new StringReader(retVal), Charset.forName("UTF-8")));
Patient p1 = new Patient();
p1.addIdentifier().setSystem("urn:system").setValue("value");
IGenericClient client = ourCtx.newRestfulGenericClient("http://foo");
client.transaction().withResources(Arrays.asList((IBaseResource) p1)).execute();
HttpUriRequest value = capt.getValue();
assertTrue("Expected request of type POST on long params list", value instanceof HttpPost);
HttpPost post = (HttpPost) value;
String body = IOUtils.toString(post.getEntity().getContent());
IOUtils.closeQuietly(post.getEntity().getContent());
ourLog.info(body);
assertThat(
body, Matchers.containsString("<type value=\"" + BundleTypeEnum.TRANSACTION.getCode()));
}
@Test
public void testServerReturnsAppropriateVersionForDstu2_050() throws Exception {
Conformance conf = new Conformance();
conf.setFhirVersion("0.5.0");
final String confResource = myCtx.newXmlParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpResponse.getStatusLine())
.thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType())
.thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_XML + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent())
.thenAnswer(
new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
if (myFirstResponse) {
myFirstResponse = false;
return new ReaderInputStream(
new StringReader(confResource), Charset.forName("UTF-8"));
} else {
return new ReaderInputStream(
new StringReader(myCtx.newXmlParser().encodeResourceToString(new Patient())),
Charset.forName("UTF-8"));
}
}
});
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
myCtx.getRestfulClientFactory().setServerValidationMode(ServerValidationModeEnum.ONCE);
IGenericClient client = myCtx.newRestfulGenericClient("http://foo");
// don't load the conformance until the first time the client is actually used
assertTrue(myFirstResponse);
client.read(new UriDt("http://foo/Patient/123"));
assertFalse(myFirstResponse);
myCtx.newRestfulGenericClient("http://foo").read(new UriDt("http://foo/Patient/123"));
myCtx.newRestfulGenericClient("http://foo").read(new UriDt("http://foo/Patient/123"));
// Conformance only loaded once, then 3 reads
verify(myHttpClient, times(4)).execute(Matchers.any(HttpUriRequest.class));
}
@Test
public void testForceConformanceCheck() throws Exception {
Conformance conf = new Conformance();
conf.setFhirVersion("0.5.0");
final String confResource = myCtx.newXmlParser().encodeResourceToString(conf);
ArgumentCaptor<HttpUriRequest> capt = ArgumentCaptor.forClass(HttpUriRequest.class);
when(myHttpResponse.getStatusLine())
.thenReturn(new BasicStatusLine(new ProtocolVersion("HTTP", 1, 1), 200, "OK"));
when(myHttpResponse.getEntity().getContentType())
.thenReturn(new BasicHeader("content-type", Constants.CT_FHIR_XML + "; charset=UTF-8"));
when(myHttpResponse.getEntity().getContent())
.thenAnswer(
new Answer<InputStream>() {
@Override
public InputStream answer(InvocationOnMock theInvocation) throws Throwable {
if (myFirstResponse) {
myFirstResponse = false;
return new ReaderInputStream(
new StringReader(confResource), Charset.forName("UTF-8"));
} else {
Patient resource = new Patient();
resource.addName().addFamily().setValue("FAM");
return new ReaderInputStream(
new StringReader(myCtx.newXmlParser().encodeResourceToString(resource)),
Charset.forName("UTF-8"));
}
}
});
when(myHttpClient.execute(capt.capture())).thenReturn(myHttpResponse);
myCtx.getRestfulClientFactory().setServerValidationMode(ServerValidationModeEnum.ONCE);
IGenericClient client = myCtx.newRestfulGenericClient("http://foo");
client.registerInterceptor(new BasicAuthInterceptor("USER", "PASS"));
client.forceConformanceCheck();
assertEquals(1, capt.getAllValues().size());
Patient pt = (Patient) client.read(new UriDt("http://foo/Patient/123"));
assertEquals("FAM", pt.getNameFirstRep().getFamilyAsSingleString());
assertEquals(2, capt.getAllValues().size());
Header auth = capt.getAllValues().get(0).getFirstHeader("Authorization");
assertNotNull(auth);
assertEquals("Basic VVNFUjpQQVNT", auth.getValue());
auth = capt.getAllValues().get(1).getFirstHeader("Authorization");
assertNotNull(auth);
assertEquals("Basic VVNFUjpQQVNT", auth.getValue());
}
public FHIRService(
String url,
Context context,
DeviceInformation deviceInfo,
no.nordicsemi.android.nrftoolbox.gls.Patient p) {
this.context = context;
this.deviceInfo = deviceInfo;
this.patient = p;
// initialize context and client
ctx = FhirContext.forDstu2();
ctx.getRestfulClientFactory().setServerValidationMode(ServerValidationModeEnum.NEVER);
client = ctx.newRestfulGenericClient(url);
}
@Test
public void testSearchByIdUsingClient() throws Exception {
IGenericClient client = ourCtx.newRestfulGenericClient("http://localhost:" + ourPort);
Bundle bundle =
client
.search()
.forResource("Patient")
.where(BaseResource.RES_ID.matches().value("aaa"))
.execute();
assertEquals(1, bundle.getEntries().size());
Patient p = bundle.getResources(Patient.class).get(0);
assertEquals("idaaa", p.getNameFirstRep().getFamilyAsSingleString());
assertEquals("IDAAA (identifier123)", bundle.getEntries().get(0).getTitle().getValue());
}
public static void establishScene() {
initScrollData();
Main.hLeft = new VBox(20);
Main.hLeft.setEffect(new DropShadow());
Main.hLeft.setAlignment(Pos.CENTER);
Main.hLeft.setBackground(new Background(Main.myBG));
Main.hLeft.setMinHeight(Main.height);
Main.hLeft.setMinWidth(Main.width / 2 - 100);
Main.hRight = new VBox(18);
Main.hRight.setAlignment(Pos.TOP_CENTER);
Main.hRight.setMinHeight(Main.height);
Main.hRight.setMinWidth(Main.width / 2 + 100);
Main.hRight.setPadding(new Insets(20, 0, 0, 20));
// Create Dividers
VBox stats = new VBox(10);
stats.setAlignment(Pos.CENTER);
// Patient Portal
Image pp = new Image("file:src/docketdoc/res/PD_Logo.png");
ImageView pap = new ImageView(pp);
VBox patientPortal = new VBox();
patientPortal.setAlignment(Pos.CENTER);
patientPortal.setPadding(new Insets(10, 10, 10, 10));
// Label
Label lp = new Label("Patient Portal");
lp.setStyle("-fx-font: 25px Futura;" + "-fx-text-fill: #66CDAA;");
patientPortal.getChildren().addAll(pap, lp);
// Search Patient
TextField searchTF = new TextField();
searchTF.setStyle(
"-fx-max-height: 50px;"
+ "-fx-max-width: 200px;"
+ "-fx-text-fill: #505050;"
+ "-fx-font: 12px Futura;"
+ "-fx-prompt-text-fill: #505050;");
searchTF.setPromptText("First Name");
TextField searchTFlast = new TextField();
searchTFlast.setStyle(
"-fx-max-height: 50px;"
+ "-fx-max-width: 200px;"
+ "-fx-text-fill: #505050;"
+ "-fx-font: 12px Futura;"
+ "-fx-prompt-text-fill: #505050;");
searchTFlast.setPromptText("Last Name");
// Interact Button
Button searchName = new Button("Search Name");
searchName.setStyle(
"-fx-background-radius: 0;"
+ "-fx-font: 16px Futura;"
+ "-fx-font-weight: bold;"
+ "-fx-text-fill: white;"
+ "-fx-background-color: #FF7F50;");
// Hover animation.
searchName.setOnMouseEntered(
e -> {
searchName.setOpacity(.5);
});
searchName.setOnMouseExited(
e -> {
searchName.setOpacity(2);
});
// Button Search for Name
searchName.setOnAction(
e -> {
/* ------------------------------------ */
/* Search patiend directory by FHIR API */
/* ------------------------------------ */
new FhirContext();
// Create a client (only needed once)
FhirContext ctx = FhirContext.forDstu2();
IGenericClient client =
ctx.newRestfulGenericClient("http://fhir2.healthintersections.com.au/open");
String search = new String(searchTF.getText() + " " + searchTFlast.getText());
// Invoke the client
Bundle bundle =
client
.search()
.forResource(Patient.class)
.where(Patient.NAME.matchesExactly().value(search))
.encodedJson()
.execute();
System.out.println("patients count=" + bundle.size());
List<Patient> list = bundle.getResources(Patient.class);
for (Patient p : list) {
namess = p.getNameFirstRep().getText();
agess = p.getBirthDateElement().toHumanDisplay();
sexess = p.getGender();
}
// Add to grid then display
// Update Name
nameShow = new Label(namess.toUpperCase());
namePat.getChildren().remove(nameShow);
patientData.getChildren().remove(namePat);
nameShow.setStyle("-fx-font: 15px Futura;" + "-fx-text-fill: #ff0080;");
namePat.getChildren().addAll(nameShow);
patientData.getChildren().add(namePat);
// Update Age
ageShow = new Label(agess.toUpperCase());
agePat.getChildren().remove(ageShow);
patientData.getChildren().remove(agePat);
ageShow.setStyle("-fx-font: 15px Futura;" + "-fx-text-fill: #ff0080;");
agePat.getChildren().addAll(ageShow);
patientData.getChildren().add(agePat);
// Update Sex
sexShow = new Label(sexess.toUpperCase());
sexPat.getChildren().remove(sexShow);
patientData.getChildren().remove(sexPat);
sexShow.setStyle("-fx-font: 15px Futura;" + "-fx-text-fill: #ff0080;");
sexPat.getChildren().addAll(sexShow);
patientData.getChildren().add(sexPat);
addScrollData();
searchTF.setText(null);
searchTFlast.setText(null);
});
/* ----------------------------------------- */
/* Right Side contained within a scroll Pane */
/* ----------------------------------------- */
patientData = new VBox(10);
// Name Divisors
pname = new Label("NAME:\t");
pname.setStyle("-fx-font: 15px Futura;" + "-fx-text-fill: #66CDAA;" + "-fx-font-weight: bold;");
namePat = new HBox(10);
namePat.getChildren().addAll(pname, nameShow);
// Age Divisors
page = new Label("DOB:\t");
page.setStyle("-fx-font: 15px Futura;" + "-fx-text-fill: #66CDAA;" + "-fx-font-weight: bold;");
agePat = new HBox(10);
agePat.getChildren().addAll(page, ageShow);
// Gender Divisors
psex = new Label("SEX:\t\t");
psex.setStyle("-fx-font: 15px Futura;" + "-fx-text-fill: #66CDAA;" + "-fx-font-weight: bold;");
sexPat = new HBox(10);
sexPat.getChildren().addAll(psex, sexShow);
patientData.getChildren().addAll(namePat, agePat, sexPat);
// Scrolls
scrollSocial.setContent(soScroll);
scrollMedical.setContent(medScroll);
scrollHistory.setContent(hisScroll);
// Add search results to right side
Main.hRight.getChildren().addAll(patientData, scrollMedical, scrollSocial, hisScroll);
// Add elements to Left Side
stats.getChildren().addAll(patientPortal, searchTF, searchTFlast, searchName);
// Set Main stage to home scene
Main.hLeft.getChildren().addAll(stats);
Main.containHome = new HBox();
Main.containHome.getChildren().addAll(Main.hLeft, Main.hRight);
Main.homeScene = new Scene(Main.containHome);
}
