private MiniMRCluster startCluster(JobConf conf, int numTrackers) throws IOException {
conf.setLong("mapred.job.tracker.retiredjobs.cache.size", 1);
conf.setLong("mapred.jobtracker.retirejob.interval", 0);
conf.setLong("mapred.jobtracker.retirejob.check", 0);
conf.getLong("mapred.jobtracker.completeuserjobs.maximum", 0);
return new MiniMRCluster(0, 0, numTrackers, "file:///", 1, null, null, null, conf, 0);
}
@Override
@SuppressWarnings("unchecked")
public void run(final JobConf job, final TaskUmbilicalProtocol umbilical) throws IOException {
final Reporter reporter = getReporter(umbilical);
// start thread that will handle communication with parent
startCommunicationThread(umbilical);
int numReduceTasks = conf.getNumReduceTasks();
LOG.info("numReduceTasks: " + numReduceTasks);
MapOutputCollector collector = null;
if (numReduceTasks > 0) {
collector = new MapOutputBuffer(umbilical, job, reporter);
} else {
collector = new DirectMapOutputCollector(umbilical, job, reporter);
}
// reinstantiate the split
try {
instantiatedSplit =
(InputSplit) ReflectionUtils.newInstance(job.getClassByName(splitClass), job);
} catch (ClassNotFoundException exp) {
IOException wrap = new IOException("Split class " + splitClass + " not found");
wrap.initCause(exp);
throw wrap;
}
DataInputBuffer splitBuffer = new DataInputBuffer();
splitBuffer.reset(split.get(), 0, split.getSize());
instantiatedSplit.readFields(splitBuffer);
// if it is a file split, we can give more details
if (instantiatedSplit instanceof FileSplit) {
FileSplit fileSplit = (FileSplit) instantiatedSplit;
job.set("map.input.file", fileSplit.getPath().toString());
job.setLong("map.input.start", fileSplit.getStart());
job.setLong("map.input.length", fileSplit.getLength());
}
RecordReader rawIn = // open input
job.getInputFormat().getRecordReader(instantiatedSplit, job, reporter);
RecordReader in = new TrackedRecordReader(rawIn, getCounters());
MapRunnable runner = (MapRunnable) ReflectionUtils.newInstance(job.getMapRunnerClass(), job);
try {
runner.run(in, collector, reporter);
collector.flush();
} finally {
// close
in.close(); // close input
collector.close();
}
done(umbilical);
}
/**
* Start simulated task trackers based on topology.
*
* @param clusterStory the cluster topology.
* @param jobConf configuration object.
* @param now time stamp when the simulator is started, {@link SimulatorTaskTracker}s are started
* uniformly randomly spread in [now,now+startDuration).
* @return time stamp by which the entire cluster is booted up and all task trackers are sending
* hearbeats in their steady rate.
*/
long startTaskTrackers(ClusterStory cluster, JobConf jobConf, long now) {
/** port assigned to TTs, incremented by 1 for each TT */
int port = 10000;
int numTaskTrackers = 0;
Random random =
new Random(RandomSeedGenerator.getSeed("forStartTaskTrackers()", masterRandomSeed));
final int startDuration =
jobConf.getInt("mumak.cluster.startup.duration", DEFAULT_CLUSTER_STARTUP_DURATION);
for (MachineNode node : cluster.getMachines()) {
jobConf.set("mumak.tasktracker.host.name", node.getName());
jobConf.set(
"mumak.tasktracker.tracker.name",
"tracker_" + node.getName() + ":localhost/127.0.0.1:" + port);
long subRandomSeed =
RandomSeedGenerator.getSeed("forTaskTracker" + numTaskTrackers, masterRandomSeed);
jobConf.setLong("mumak.tasktracker.random.seed", subRandomSeed);
numTaskTrackers++;
port++;
SimulatorTaskTracker tt = new SimulatorTaskTracker(jt, jobConf);
long firstHeartbeat = now + random.nextInt(startDuration);
queue.addAll(tt.init(firstHeartbeat));
}
// In startDuration + heartbeat interval of the full cluster time each
// TT is started up and told on its 2nd heartbeat to beat at a rate
// corresponding to the steady state of the cluster
long clusterSteady = now + startDuration + jt.getNextHeartbeatInterval();
return clusterSteady;
}
public void inject(Path crawlDb, Path urlDir) throws IOException {
SimpleDateFormat sdf = new SimpleDateFormat("yyyy-MM-dd HH:mm:ss");
long start = System.currentTimeMillis();
if (LOG.isInfoEnabled()) {
LOG.info("Injector: starting at " + sdf.format(start));
LOG.info("Injector: crawlDb: " + crawlDb);
LOG.info("Injector: urlDir: " + urlDir);
}
Path tempDir =
new Path(
getConf().get("mapred.temp.dir", ".")
+ "/inject-temp-"
+ Integer.toString(new Random().nextInt(Integer.MAX_VALUE)));
// map text input file to a <url,CrawlDatum> file
if (LOG.isInfoEnabled()) {
LOG.info("Injector: Converting injected urls to crawl db entries.");
}
JobConf sortJob = new NutchJob(getConf());
sortJob.setJobName("inject " + urlDir);
FileInputFormat.addInputPath(sortJob, urlDir);
sortJob.setMapperClass(InjectMapper.class);
FileOutputFormat.setOutputPath(sortJob, tempDir);
sortJob.setOutputFormat(SequenceFileOutputFormat.class);
sortJob.setOutputKeyClass(Text.class);
sortJob.setOutputValueClass(CrawlDatum.class);
sortJob.setLong("injector.current.time", System.currentTimeMillis());
RunningJob mapJob = JobClient.runJob(sortJob);
long urlsInjected = mapJob.getCounters().findCounter("injector", "urls_injected").getValue();
long urlsFiltered = mapJob.getCounters().findCounter("injector", "urls_filtered").getValue();
LOG.info("Injector: total number of urls rejected by filters: " + urlsFiltered);
LOG.info(
"Injector: total number of urls injected after normalization and filtering: "
+ urlsInjected);
// merge with existing crawl db
if (LOG.isInfoEnabled()) {
LOG.info("Injector: Merging injected urls into crawl db.");
}
JobConf mergeJob = CrawlDb.createJob(getConf(), crawlDb);
FileInputFormat.addInputPath(mergeJob, tempDir);
mergeJob.setReducerClass(InjectReducer.class);
JobClient.runJob(mergeJob);
CrawlDb.install(mergeJob, crawlDb);
// clean up
FileSystem fs = FileSystem.get(getConf());
fs.delete(tempDir, true);
long end = System.currentTimeMillis();
LOG.info(
"Injector: finished at "
+ sdf.format(end)
+ ", elapsed: "
+ TimingUtil.elapsedTime(start, end));
}
/**
* Creates the configuration for mumak simulation. This is kept modular mostly for testing
* purposes. so that the standard configuration can be modified before passing it to the init()
* function.
*
* @return JobConf: the configuration for the SimulatorJobTracker
*/
JobConf createMumakConf() {
JobConf jobConf = new JobConf(getConf());
jobConf.setClass(
"topology.node.switch.mapping.impl", StaticMapping.class, DNSToSwitchMapping.class);
jobConf.set("fs.default.name", "file:///");
jobConf.set("mapred.job.tracker", "localhost:8012");
jobConf.setInt("mapred.jobtracker.job.history.block.size", 512);
jobConf.setInt("mapred.jobtracker.job.history.buffer.size", 512);
jobConf.setLong("mapred.tasktracker.expiry.interval", 5000);
jobConf.setInt("mapred.reduce.copy.backoff", 4);
jobConf.setLong("mapred.job.reuse.jvm.num.tasks", -1);
jobConf.setUser("mumak");
jobConf.set(
"mapred.system.dir",
jobConf.get("hadoop.log.dir", "/tmp/hadoop-" + jobConf.getUser()) + "/mapred/system");
return jobConf;
}
@Override
protected void setUp() throws Exception {
JobConf conf = new JobConf();
conf.set(JTConfig.JT_IPC_ADDRESS, "localhost:0");
conf.set(JTConfig.JT_HTTP_ADDRESS, "0.0.0.0:0");
conf.setLong(JTConfig.JT_TRACKER_EXPIRY_INTERVAL, 1000);
conf.set(JTConfig.JT_MAX_TRACKER_BLACKLISTS, "1");
jobTracker = new FakeJobTracker(conf, (clock = new FakeClock()), trackers);
jobTracker.startExpireTrackersThread();
}
/** When no input dir is specified, generate random data. */
protected static void confRandom(JobConf job) throws IOException {
// from RandomWriter
job.setInputFormat(RandomInputFormat.class);
job.setMapperClass(RandomMapOutput.class);
final ClusterStatus cluster = new JobClient(job).getClusterStatus();
int numMapsPerHost = job.getInt(RandomTextWriter.MAPS_PER_HOST, 10);
long numBytesToWritePerMap =
job.getLong(RandomTextWriter.BYTES_PER_MAP, 1 * 1024 * 1024 * 1024);
if (numBytesToWritePerMap == 0) {
throw new IOException("Cannot have " + RandomTextWriter.BYTES_PER_MAP + " set to 0");
}
long totalBytesToWrite =
job.getLong(
RandomTextWriter.TOTAL_BYTES,
numMapsPerHost * numBytesToWritePerMap * cluster.getTaskTrackers());
int numMaps = (int) (totalBytesToWrite / numBytesToWritePerMap);
if (numMaps == 0 && totalBytesToWrite > 0) {
numMaps = 1;
job.setLong(RandomTextWriter.BYTES_PER_MAP, totalBytesToWrite);
}
job.setNumMapTasks(numMaps);
}
/**
* Initialize DFSCopyFileMapper specific job-configuration.
*
* @param conf : The dfs/mapred configuration.
* @param jobConf : The handle to the jobConf object to be initialized.
* @param args Arguments
*/
private static void setup(Configuration conf, JobConf jobConf, final Arguments args)
throws IOException {
jobConf.set(DST_DIR_LABEL, args.dst.toUri().toString());
// set boolean values
final boolean update = args.flags.contains(Options.UPDATE);
final boolean overwrite = !update && args.flags.contains(Options.OVERWRITE);
jobConf.setBoolean(Options.UPDATE.propertyname, update);
jobConf.setBoolean(Options.OVERWRITE.propertyname, overwrite);
jobConf.setBoolean(
Options.IGNORE_READ_FAILURES.propertyname,
args.flags.contains(Options.IGNORE_READ_FAILURES));
jobConf.setBoolean(
Options.PRESERVE_STATUS.propertyname, args.flags.contains(Options.PRESERVE_STATUS));
final String randomId = getRandomId();
JobClient jClient = new JobClient(jobConf);
Path jobDirectory = new Path(jClient.getSystemDir(), NAME + "_" + randomId);
jobConf.set(JOB_DIR_LABEL, jobDirectory.toString());
FileSystem dstfs = args.dst.getFileSystem(conf);
boolean dstExists = dstfs.exists(args.dst);
boolean dstIsDir = false;
if (dstExists) {
dstIsDir = dstfs.getFileStatus(args.dst).isDir();
}
// default logPath
Path logPath = args.log;
if (logPath == null) {
String filename = "_distcp_logs_" + randomId;
if (!dstExists || !dstIsDir) {
Path parent = args.dst.getParent();
if (!dstfs.exists(parent)) {
dstfs.mkdirs(parent);
}
logPath = new Path(parent, filename);
} else {
logPath = new Path(args.dst, filename);
}
}
FileOutputFormat.setOutputPath(jobConf, logPath);
// create src list, dst list
FileSystem jobfs = jobDirectory.getFileSystem(jobConf);
Path srcfilelist = new Path(jobDirectory, "_distcp_src_files");
jobConf.set(SRC_LIST_LABEL, srcfilelist.toString());
SequenceFile.Writer src_writer =
SequenceFile.createWriter(
jobfs,
jobConf,
srcfilelist,
LongWritable.class,
FilePair.class,
SequenceFile.CompressionType.NONE);
Path dstfilelist = new Path(jobDirectory, "_distcp_dst_files");
SequenceFile.Writer dst_writer =
SequenceFile.createWriter(
jobfs, jobConf, dstfilelist, Text.class, Text.class, SequenceFile.CompressionType.NONE);
Path dstdirlist = new Path(jobDirectory, "_distcp_dst_dirs");
jobConf.set(DST_DIR_LIST_LABEL, dstdirlist.toString());
SequenceFile.Writer dir_writer =
SequenceFile.createWriter(
jobfs,
jobConf,
dstdirlist,
Text.class,
FilePair.class,
SequenceFile.CompressionType.NONE);
// handle the case where the destination directory doesn't exist
// and we've only a single src directory OR we're updating/overwriting
// the contents of the destination directory.
final boolean special = (args.srcs.size() == 1 && !dstExists) || update || overwrite;
int srcCount = 0, cnsyncf = 0, dirsyn = 0;
long fileCount = 0L, byteCount = 0L, cbsyncs = 0L;
try {
for (Iterator<Path> srcItr = args.srcs.iterator(); srcItr.hasNext(); ) {
final Path src = srcItr.next();
FileSystem srcfs = src.getFileSystem(conf);
FileStatus srcfilestat = srcfs.getFileStatus(src);
Path root = special && srcfilestat.isDir() ? src : src.getParent();
if (srcfilestat.isDir()) {
++srcCount;
}
Stack<FileStatus> pathstack = new Stack<FileStatus>();
for (pathstack.push(srcfilestat); !pathstack.empty(); ) {
FileStatus cur = pathstack.pop();
FileStatus[] children = srcfs.listStatus(cur.getPath());
for (int i = 0; i < children.length; i++) {
boolean skipfile = false;
final FileStatus child = children[i];
final String dst = makeRelative(root, child.getPath());
++srcCount;
if (child.isDir()) {
pathstack.push(child);
} else {
// skip file if the src and the dst files are the same.
skipfile = update && sameFile(srcfs, child, dstfs, new Path(args.dst, dst));
// skip file if it exceed file limit or size limit
skipfile |=
fileCount == args.filelimit || byteCount + child.getLen() > args.sizelimit;
if (!skipfile) {
++fileCount;
byteCount += child.getLen();
if (LOG.isTraceEnabled()) {
LOG.trace("adding file " + child.getPath());
}
++cnsyncf;
cbsyncs += child.getLen();
if (cnsyncf > SYNC_FILE_MAX || cbsyncs > BYTES_PER_MAP) {
src_writer.sync();
dst_writer.sync();
cnsyncf = 0;
cbsyncs = 0L;
}
}
}
if (!skipfile) {
src_writer.append(
new LongWritable(child.isDir() ? 0 : child.getLen()), new FilePair(child, dst));
}
dst_writer.append(new Text(dst), new Text(child.getPath().toString()));
}
if (cur.isDir()) {
String dst = makeRelative(root, cur.getPath());
dir_writer.append(new Text(dst), new FilePair(cur, dst));
if (++dirsyn > SYNC_FILE_MAX) {
dirsyn = 0;
dir_writer.sync();
}
}
}
}
} finally {
checkAndClose(src_writer);
checkAndClose(dst_writer);
checkAndClose(dir_writer);
}
FileStatus dststatus = null;
try {
dststatus = dstfs.getFileStatus(args.dst);
} catch (FileNotFoundException fnfe) {
LOG.info(args.dst + " does not exist.");
}
// create dest path dir if copying > 1 file
if (dststatus == null) {
if (srcCount > 1 && !dstfs.mkdirs(args.dst)) {
throw new IOException("Failed to create" + args.dst);
}
}
final Path sorted = new Path(jobDirectory, "_distcp_sorted");
checkDuplication(jobfs, dstfilelist, sorted, conf);
if (dststatus != null && args.flags.contains(Options.DELETE)) {
deleteNonexisting(dstfs, dststatus, sorted, jobfs, jobDirectory, jobConf, conf);
}
Path tmpDir =
new Path(
(dstExists && !dstIsDir) || (!dstExists && srcCount == 1)
? args.dst.getParent()
: args.dst,
"_distcp_tmp_" + randomId);
jobConf.set(TMP_DIR_LABEL, tmpDir.toUri().toString());
LOG.info("srcCount=" + srcCount);
jobConf.setInt(SRC_COUNT_LABEL, srcCount);
jobConf.setLong(TOTAL_SIZE_LABEL, byteCount);
setMapCount(byteCount, jobConf);
}
