/**
* Process the xml file and output a csv file with the results in the same directory
*
* @param dataFile the xml file to process
* @suffix suffix for identifying the data file
* @param suffix
* @throws ResourceInitializationException
* @throws UIMAException
* @throws IOException
* @throws AnalysisEngineProcessException
* @throws SimilarityException
*/
private void processEnglishFile(String dataFile, String suffix)
throws ResourceInitializationException, UIMAException, IOException,
AnalysisEngineProcessException, SimilarityException {
/** Parameters for matching tree structures */
String parameterList =
Joiner.on(",")
.join(new String[] {RichNode.OUTPUT_PAR_LEMMA, RichNode.OUTPUT_PAR_TOKEN_LOWERCASE});
/** Marker which adds relational information to a pair of trees */
MarkTreesOnRepresentation marker = new MarkTreesOnRepresentation(new MarkTwoAncestors());
/** Load stopwords for english */
marker.useStopwords(Stopwords.STOPWORD_EN);
/** Tree serializer for converting tree structures to string */
TreeSerializer ts = new TreeSerializer().enableRelationalTags().useRoundBrackets();
/** Instantiate CASes */
JCas questionCas = JCasFactory.createJCas();
JCas commentCas = JCasFactory.createJCas();
WriteFile out = new WriteFile(dataFile + ".csv");
Document doc = Jsoup.parse(new File(dataFile), "UTF-8");
doc.select("QURAN").remove();
doc.select("HADEETH").remove();
boolean firstRow = true;
/** Consume data */
Elements questions = doc.getElementsByTag("Question");
int numberOfQuestions = questions.size();
int questionNumber = 1;
Map<String, Boolean> commentIsDialogue = new HashMap<>();
for (Element question : questions) {
System.out.println("[INFO]: Processing " + questionNumber++ + " out of " + numberOfQuestions);
/** Parse question node */
String qid = question.attr("QID");
String qcategory = question.attr("QCATEGORY");
String qdate = question.attr("QDATE");
String quserid = question.attr("QUSERID");
String qtype = question.attr("QTYPE");
String qgold_yn = question.attr("QGOLD_YN");
String qsubject = question.getElementsByTag("QSubject").get(0).text();
String qbody = question.getElementsByTag("QBody").get(0).text();
/** Setup question CAS */
questionCas.reset();
questionCas.setDocumentLanguage("en");
questionCas.setDocumentText(qsubject + ". " + qbody);
/** Run the UIMA pipeline */
SimplePipeline.runPipeline(questionCas, this.analysisEngineList);
// this.analyzer.analyze(questionCas, new SimpleContent("q-" + qid, qsubject + ". " + qbody));
/** Parse comment nodes */
Elements comments = question.getElementsByTag("Comment");
for (Element comment : comments) {
String cid = comment.attr("CID");
String cuserid = comment.attr("CUSERID");
String cgold = comment.attr("CGOLD");
String cgold_yn = comment.attr("CGOLD_YN");
String csubject = comment.getElementsByTag("CSubject").get(0).text();
String cbody = comment.getElementsByTag("CBody").get(0).text();
/** Setup comment CAS */
commentCas.reset();
commentCas.setDocumentLanguage("en");
commentCas.setDocumentText(csubject + ". " + cbody);
/** Run the UIMA pipeline */
SimplePipeline.runPipeline(commentCas, this.analysisEngineList);
// this.analyzer.analyze(commentCas, new SimpleContent("c-" + cid, csubject + ". " +
// cbody));
FeatureVector fv = pfEnglish.getPairFeatures(questionCas, commentCas, parameterList);
/**
* ************************************* * * * PLUG YOUR FEATURES HERE * * * *
* *************************************
*/
/**
* fv is actually an AugmentableFeatureVector from the Mallet library
*
* <p>Internally the features are named so you must specify an unique identifier.
*
* <p>An example:
*
* <p>((AugmentableFeatureVector) fv).add("your_super_feature_id", 42);
*
* <p>or:
*
* <p>AugmentableFeatureVector afv = (AugmentableFeatureVector) fv;
* afv.add("your_super_feature_id", 42);
*/
boolean quseridEqCuserid = quserid.equals(cuserid);
if (quseridEqCuserid) {
commentIsDialogue.put(cid, true);
}
// ((AugmentableFeatureVector) fv).add("quseridEqCuserid", quseridEqCuserid);
/**
* ************************************* * * * THANKS! * * * *
* *************************************
*/
/** Produce output line */
if (firstRow) {
out.write("qid,cgold,cgold_yn");
for (int i = 0; i < fv.numLocations(); i++) {
int featureIndex = i + 1;
out.write(",f" + featureIndex);
}
out.write("\n");
firstRow = false;
}
List<Double> features = this.serializeFv(fv);
out.writeLn(cid + "," + cgold + "," + cgold_yn + "," + Joiner.on(",").join(features));
/** Produce also the file needed to train structural models */
if (PRODUCE_SVMLIGHTTK_DATA) {
produceSVMLightTKExample(
questionCas, commentCas, suffix, ts, qid, cid, cgold, cgold_yn, features);
}
}
}
for (String commentId : commentIsDialogue.keySet()) {
this.fm.writeLn(dataFile + ".dialogue.txt", commentId);
}
this.fm.closeFiles();
out.close();
}
/**
* Process the xml file and output a csv file with the results in the same directory
*
* @param dataFile the xml file to process
* @suffix suffix for identifying the data file
* @param suffix
* @throws ResourceInitializationException
* @throws UIMAException
* @throws IOException
* @throws AnalysisEngineProcessException
* @throws SimilarityException
*/
private void processEnglishFile(String dataFile)
throws ResourceInitializationException, UIMAException, IOException,
AnalysisEngineProcessException, SimilarityException {
/** Parameters for matching tree structures */
String parameterList =
Joiner.on(",")
.join(new String[] {RichNode.OUTPUT_PAR_LEMMA, RichNode.OUTPUT_PAR_TOKEN_LOWERCASE});
/** Marker which adds relational information to a pair of trees */
MarkTreesOnRepresentation marker = new MarkTreesOnRepresentation(new MarkTwoAncestors());
/** Load stopwords for english */
marker.useStopwords(Stopwords.STOPWORD_EN);
/** Tree serializer for converting tree structures to string */
// TreeSerializer ts = new TreeSerializer().enableRelationalTags().useRoundBrackets();
WriteFile out = new WriteFile(dataFile + SUFFIX);
Document doc = Jsoup.parse(new File(dataFile), "UTF-8");
doc.select("QURAN").remove();
doc.select("HADEETH").remove();
boolean firstRow = true;
/** Consume data */
Elements questions = doc.getElementsByTag("Question");
int numberOfQuestions = questions.size();
int questionNumber = 1;
// Map<String, Boolean> commentIsDialogue = new HashMap<>();
// HashSet<String> questionCategories = new HashSet<String>();
double[] matches = new double[11];
int[] totals = new int[11];
int bin;
for (Element question : questions) {
Question q = new Question();
System.out.println("[INFO]: Processing " + questionNumber++ + " out of " + numberOfQuestions);
/** Parse question node */
String qid = question.attr("QID");
String qcategory = question.attr("QCATEGORY");
String qdate = question.attr("QDATE");
String quserid = question.attr("QUSERID");
String qtype = question.attr("QTYPE");
String qgold_yn = question.attr("QGOLD_YN");
String qsubject = question.getElementsByTag("QSubject").get(0).text();
String qbody = question.getElementsByTag("QBody").get(0).text();
// questionCategories.add(qcategory);
q.setQid(qid);
q.setQcategory(qcategory);
q.setQdate(qdate);
q.setQuserId(quserid);
q.setQtype(qtype);
q.setQgoldYN(qgold_yn);
q.setQsubject(qsubject);
q.setQbody(qbody);
// this.analyzer.analyze(questionCas, new SimpleContent("q-" + qid, qsubject + ". " + qbody));
/** Parse comment nodes */
Elements comments = question.getElementsByTag("Comment");
if (LIMIT_COMMENTS_PER_Q && comments.size() >= LIMIT_COMMENTS) {
continue;
}
for (Element comment : comments) {
String cid = comment.attr("CID");
String cuserid = comment.attr("CUSERID");
String cgold = comment.attr("CGOLD");
String cgold_yn = comment.attr("CGOLD_YN");
String csubject = comment.getElementsByTag("CSubject").get(0).text();
String cbody = comment.getElementsByTag("CBody").get(0).text();
q.addComment(cid, cuserid, cgold, cgold_yn, csubject, cbody);
}
List<JCas> allCommentsCas = new ArrayList<JCas>();
List<String> ids = new ArrayList<String>();
List<String> labels = new ArrayList<String>();
for (Element comment : comments) {
allCommentsCas.add(computeCommentCas(comment));
ids.add(comment.attr("CID"));
labels.add(getgold(comment.attr("CGOLD")));
}
for (int i = 0; i < allCommentsCas.size() - 1; i++) {
for (int j = i + 1; j <= allCommentsCas.size() - 1; j++) {
AugmentableFeatureVector fv;
// COMPUTE THE SIMILARITY HERE
// TODO where to assign this
// Whether the CAS are exactly identical
// how to store/display the output
fv =
(AugmentableFeatureVector)
pfEnglish.getPairFeatures(
allCommentsCas.get(i), allCommentsCas.get(j), parameterList);
// System.out.println(
// ids.get(i) + ","+
// labels.get(i) + ","+
// ids.get(j)+","+
// labels.get(j) + ","+
// Joiner.on(",").join(this.serializeFv(fv))
// );
bin = (int) Math.round(fv.getValues()[0] * 10);
if (labels.get(i).equals(labels.get(j))) matches[bin]++;
totals[bin]++;
/** Produce output line */
if (firstRow) {
out.write("qid,cgold");
for (int c = 0; c < fv.numLocations(); c++) {
int featureIndex = c + 1;
out.write(",f" + featureIndex);
}
out.write("\n");
firstRow = false;
}
// System.out.println(bin);
out.writeLn(
ids.get(i)
+ "-"
+ ids.get(j)
+ ","
+ labels.get(i)
+ "-"
+ labels.get(j)
+ ","
+ Joiner.on(",").join(this.serializeFv(fv)));
}
}
}
for (int i = 0; i < 11; i++)
System.out.println("BIN: " + i + " pctge: " + matches[i] / totals[i]);
this.fm.closeFiles();
out.close();
}
public void processArabicFile(Analyzer analyzer, String dataFile, String suffix)
throws SimilarityException, UIMAException, IOException {
/** We do not have a lemmatizer so we work with tokens */
String parameterList = Joiner.on(",").join(new String[] {RichNode.OUTPUT_PAR_TOKEN_LOWERCASE});
/** Instantiate CASes */
JCas questionCas = JCasFactory.createJCas();
JCas commentCas = JCasFactory.createJCas();
WriteFile out = new WriteFile(dataFile + ".csv");
Document doc = Jsoup.parse(new File(dataFile), "UTF-8");
boolean firstRow = true;
/** Consume data */
Elements questions = doc.getElementsByTag("Question");
int numberOfQuestions = questions.size();
int questionNumber = 1;
for (Element question : questions) {
System.out.println("[INFO]: Processing " + questionNumber++ + " out of " + numberOfQuestions);
/** Parse question node */
String qid = question.attr("QID");
String qcategory = question.attr("QCATEGORY");
String qdate = question.attr("QDATE");
String qsubject =
question
.getElementsByTag("QSubject")
.get(0)
.text()
.replaceAll("/", "")
.replaceAll("~", "");
String qbody =
question.getElementsByTag("QBody").get(0).text().replaceAll("/", "").replaceAll("~", "");
/** Get analyzed text for question */
if (USE_QCRI_ALT_TOOLS) {
questionCas = this.getPreliminarCas(analyzer, questionCas, qid, qsubject + ". " + qbody);
} else {
questionCas.reset();
questionCas.setDocumentLanguage("ar");
questionCas.setDocumentText(qsubject + ". " + qbody);
SimplePipeline.runPipeline(questionCas, this.analysisEngineList);
}
/** Parse answer nodes */
Elements comments = question.getElementsByTag("Answer");
for (Element comment : comments) {
String cid = comment.attr("CID");
String cgold = comment.attr("CGOLD");
String cbody = comment.text().replaceAll("/", "").replaceAll("~", "");
;
/** Get analyzed text for comment */
if (USE_QCRI_ALT_TOOLS) {
commentCas = this.getPreliminarCas(analyzer, commentCas, cid, cbody);
} else {
commentCas.reset();
commentCas.setDocumentLanguage("ar");
commentCas.setDocumentText(cbody);
SimplePipeline.runPipeline(commentCas, this.analysisEngineList);
}
/** Compute features between question and comment */
FeatureVector fv = pfArabic.getPairFeatures(questionCas, commentCas, parameterList);
/**
* ************************************* * * * PLUG YOUR FEATURES HERE * * * *
* *************************************
*/
/**
* fv is actually an AugmentableFeatureVector from the Mallet library
*
* <p>Internally the features are named so you must specify an unique identifier.
*
* <p>An example:
*
* <p>((AugmentableFeatureVector) fv).add("your_super_feature_id", 42);
*
* <p>or:
*
* <p>AugmentableFeatureVector afv = (AugmentableFeatureVector) fv;
* afv.add("your_super_feature_id", 42);
*/
/**
* ************************************* * * * THANKS! * * * *
* *************************************
*/
/** Produce output line */
if (firstRow) {
out.write("cid,cgold");
for (int i = 0; i < fv.numLocations(); i++) {
int featureIndex = i + 1;
out.write(",f" + featureIndex);
}
out.write("\n");
firstRow = false;
}
List<Double> features = this.serializeFv(fv);
/** Produce output line */
out.writeLn(qid + "-" + cid + "," + cgold + "," + Joiner.on(",").join(features));
}
}
this.fm.closeFiles();
out.close();
}
