@Before
public void loadOwl() throws Exception {
OWLOntologyManager manager = OWLManager.createOWLOntologyManager();
String uri =
Resources.getResource("ontologies/cases/" + getTestName() + ".owl").toURI().toString();
IRI iri = IRI.create(uri);
OWLOntology ont = manager.loadOntologyFromOntologyDocument(iri);
if (performInference) {
ReasonerConfiguration config = new ReasonerConfiguration();
config.setFactory(ElkReasonerFactory.class.getCanonicalName());
config.setAddDirectInferredEdges(true);
ReasonerUtil util = new ReasonerUtil(config, manager, ont);
util.reason();
}
OWLOntologyWalker walker = new OWLOntologyWalker(manager.getOntologies());
GraphOwlVisitor visitor = new GraphOwlVisitor(walker, graph, new ArrayList<MappedProperty>());
walker.walkStructure(visitor);
OwlPostprocessor postprocessor =
new OwlPostprocessor(graphDb, Collections.<String, String>emptyMap());
postprocessor.processSomeValuesFrom();
drawGraph();
}
public OWLProfileReport checkOntology(OWLOntology ontology) {
this.ont = ontology;
OWL2DLProfile profile = new OWL2DLProfile();
OWLProfileReport report = profile.checkOntology(ontology);
Set<OWLProfileViolation> violations = new HashSet<OWLProfileViolation>();
violations.addAll(report.getViolations());
OWLOntologyWalker ontologyWalker = new OWLOntologyWalker(ontology.getImportsClosure());
OWL2ELProfileObjectVisitor visitor =
new OWL2ELProfileObjectVisitor(ontologyWalker, ontology.getOWLOntologyManager());
ontologyWalker.walkStructure(visitor);
violations.addAll(visitor.getProfileViolations());
return new OWLProfileReport(this, violations);
}