@Override
  public void configurationChanged(ConfigurationEvent event) {
    Configuration newConfig = event.getConfiguration();
    builder = new SAXBuilder(newConfig.isValidateListing());

    if (newConfig.isValidateListing()) {
      log.debug("Using the default XML entity resolver");
      builder.setEntityResolver(validationEntityResolver);
    } else {
      log.debug("Using the plain XML entity resolver");
      builder.setEntityResolver(plainEntityResolver);
    }
  }
 /**
  * Initialize all the exporters
  *
  * @param file the {@link File} with the exporters to intialize
  * @throws ExportException when cannot read from the file
  */
 public static void initializeExporters(File file) throws ExportException {
   BufferedReader reader = null;
   try {
     reader = new BufferedReader(new FileReader(file));
     // if(reader==null)
     // {
     // String params[]={file.getAbsolutePath()};
     // throw new
     // ExportException(StringUtilities.getReplacedString(PropertiesHandler.getResourceString("error.algorithm.file"),params));
     // }
     SAXBuilder builder = new SAXBuilder(true);
     builder.setEntityResolver(new NetworkEntityResolver());
     Document doc = builder.build(reader);
     loadFromDocument(doc);
   } catch (FileNotFoundException e) {
     throw new ExportException(e.getMessage());
   } catch (JDOMException e) {
     throw new ExportException(e.getMessage());
   } catch (Exception e) {
     throw new ExportException(e.getMessage());
   } finally {
     if (reader != null) {
       try {
         reader.close();
       } catch (IOException ignore) {
       }
     }
   }
 }
Beispiel #3
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  private void loadData(File path) {
    if (path.isDirectory()) {
      File[] dataFiles = path.listFiles(new XMLFilter());
      SAXBuilder builder = new SAXBuilder();
      GeneratorDtdResolver resolver = new GeneratorDtdResolver(path);
      builder.setEntityResolver(resolver);

      for (int i = 0; i < dataFiles.length; i++) {
        try {
          URL url = dataFiles[i].toURI().toURL();
          Document nameSet = builder.build(url);
          DocType dt = nameSet.getDocType();

          if (dt.getElementName().equals("GENERATOR")) {
            loadFromDocument(nameSet);
          }

          nameSet = null;
          dt = null;
        } catch (Exception e) {
          Logging.errorPrint(e.getMessage(), e);
          JOptionPane.showMessageDialog(this, "XML Error with file " + dataFiles[i].getName());
        }
      }

      loadDropdowns();
    } else {
      JOptionPane.showMessageDialog(this, "No data files in directory " + path.getPath());
    }
  }
Beispiel #4
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  public static void parse(InputStream is, XmlTagHandler tag, EntityResolver resolver)
      throws XmlParseException {
    SAXBuilder builder;
    Document doc;

    builder = new SAXBuilder();

    if (resolver != null) {
      builder.setEntityResolver(resolver);
    }

    try {
      if (resolver != null) {
        // WTF?  seems relative entity URIs are allowed
        // by certain xerces impls.  but fully qualified
        // file://... URLs trigger a NullPointerException
        // in others.  setting base here worksaround
        doc = builder.build(is, "");
      } else {
        doc = builder.build(is);
      }
    } catch (JDOMException exc) {
      XmlParseException toThrow = new XmlParseException(exc.getMessage());
      toThrow.initCause(exc);
      throw toThrow;
    } catch (IOException exc) {
      XmlParseException toThrow = new XmlParseException(exc.getMessage());
      toThrow.initCause(exc);
      throw toThrow;
    }

    generalParse(tag, doc);
  }
  /** Create a new instance of JDOMOBEXResponseParser. */
  public JDOMOBEXResponseParser() {
    super();

    /* turn on validation */
    builder = new SAXBuilder(true);
    builder.setEntityResolver(validationEntityResolver);

    processorChain = new XMLVersionProcessor().setNextProcessor(new RemoveInvalidCharsProcessor());
  }
  /**
   * Merge 2 documents by XSLT.
   *
   * @param left Left hand document
   * @param right Right hand document
   * @return The merged document
   */
  private Document merge(Document left, Document right) {
    try {
      Document doc = createUnifiedDocument(left, right);

      org.jdom.output.DOMOutputter outputter = new org.jdom.output.DOMOutputter();
      org.w3c.dom.Document domDocument = outputter.output(doc);

      javax.xml.transform.Source xmlSource = new javax.xml.transform.dom.DOMSource(domDocument);

      if (transformer == null) {
        TransformerFactory tFactory = TransformerFactory.newInstance();
        transformer = tFactory.newTransformer(xsltSource);
      }

      ByteArrayOutputStream baos = new ByteArrayOutputStream();

      StreamResult xmlResult = new StreamResult(baos);

      transformer.transform(xmlSource, xmlResult);

      // PArse it back into a JDOM document
      SAXBuilder factory = new SAXBuilder();
      factory.setValidation(false);

      // We don't know what the DTD of the document is, so we won't have a local
      // copy - so we don't want to fail if we can't get it!

      factory.setEntityResolver(
          new EntityResolver() {
            public InputSource resolveEntity(String thePublicId, String theSystemId)
                throws SAXException {
              return new InputSource(new StringReader(""));
            }
          });

      return factory.build(new ByteArrayInputStream(baos.toByteArray()));
    } catch (Exception ex) {
      throw new CargoException("Exception whilst trying to transform documents", ex);
    }
  }
  public static void deleteDataSource(File deploymentFile, String name) {
    Document doc;
    Element root;
    if (deploymentFile == null) {
      log.error("DeleteDatasource: passed file is null");
      return;
    }
    if (deploymentFile.exists()) {
      try {
        SAXBuilder builder = new SAXBuilder();
        SelectiveSkippingEntityResolver entityResolver =
            SelectiveSkippingEntityResolver.getDtdAndXsdSkippingInstance();
        builder.setEntityResolver(entityResolver);

        doc = builder.build(deploymentFile);
        root = doc.getRootElement();

        if (root != null) {
          if (!root.getName().equals("datasources")) {
            throw new RuntimeException(
                "Datasource file format exception on ["
                    + deploymentFile
                    + "], expected [datasources] element but found ["
                    + root.getName()
                    + "]");
          }

          Element datasourceElement = findDatasourceElement(root, name);
          root.removeContent(datasourceElement);
        }

        updateFile(deploymentFile, doc);
      } catch (JDOMException e) {
        log.error("Parsing error occurred while deleting datasource at file: " + deploymentFile, e);
      } catch (IOException e) {
        log.error("IO error occurred while deleting datasource at file: " + deploymentFile, e);
      }
    }
  }
Beispiel #8
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 /**
  * @param validate
  * @return
  */
 private static SAXBuilder getSAXBuilder(boolean validate) {
   SAXBuilder builder = getSAXBuilderWithoutXMLResolver(validate);
   Resolver resolver = ResolverWrapper.getInstance();
   builder.setEntityResolver(resolver.getXmlResolver());
   return builder;
 }
Beispiel #9
0
  // Example catalog.xml file contents
  //
  // <?xml version="1.0"?>
  //  <!-- commented out to prevent network access
  //     !DOCTYPE catalog PUBLIC "-//OASIS//DTD Entity Resolution XML Catalog V1.0//EN"
  //    "http://www.oasis-open.org/committees/entity/release/1.0/catalog.dtd"
  //   -->
  // <catalog xmlns="urn:oasis:names:tc:entity:xmlns:xml:catalog">
  //   <group prefer="public" xml:base="">
  //     <public
  //	 publicId="-//AIAA//DTD for Flight Dynamic Models - Functions 2.0//EN"
  //	 uri="schemas/DAVEfunc.dtd"/>
  //
  //     <public
  //	 publicId="-//W3C//DTD MathML 2.0//EN"
  //	 uri="schemas/mathml2.dtd"/>
  //
  //    </group>
  // </catalog>
  public Document load() throws IOException {
    Document doc = null;
    XMLCatalogResolver cr = null;
    String directory_uri = this.base_uri.substring(0, this.base_uri.lastIndexOf('/'));
    String errorLine = "No error.";
    boolean tryValidationFlag = true;
    int numberOfFailures = 0;
    boolean success = false;
    while (numberOfFailures < 2 && !success) {
      success = true;
      errorLine = "Error when attempting validation...";

      // see if we can open the file first, and deal with any exceptions
      try {
        // open the XML file
        _inputStream = new FileInputStream(this.inputFileName);
        assert (_inputStream != null);
      } catch (IOException e) {
        System.err.println("Error opening file '" + this.inputFileName + "': " + e.getMessage());
        System.exit(-1);
      }

      // now see if we can parse it; try with and without validation
      try {
        // Load XML into JDOM Document
        SAXBuilder builder = new SAXBuilder(tryValidationFlag);
        // must turn off Xerces desire to load external DTD regardless of validation
        builder.setFeature("http://apache.org/xml/features/nonvalidating/load-external-dtd", false);
        if (tryValidationFlag) {
          String[] catalogs;
          // environment variable XML_CATALOG_FILES trumps properties file
          String xml_catalog_files = System.getenv("XML_CATALOG_FILES");
          if (xml_catalog_files == null) {
            xml_catalog_files = System.getProperty("xml.catalog.files");
          }
          if (xml_catalog_files != null) {
            catalogs =
                new String[] {xml_catalog_files, "catalog.xml", "catalog", "file:/etc/xml/catalog"};
          } else {
            catalogs = new String[] {"catalog.xml", "catalog", "file:/etc/xml/catalog"};
          }
          cr = new XMLCatalogResolver(catalogs);

          //                    // here to test stuff
          //
          //                    cr.setUseLiteralSystemId(false);
          //
          //                    boolean preferPublic = cr.getPreferPublic();
          //                    if (preferPublic)
          //                        System.out.println("Prefer public");
          //                    else
          //                        System.out.println("Prefer system");
          //
          //                    System.out.println("call to resolvePublic for DAVE-ML models
          // gives:");
          //                    System.out.println(cr.resolvePublic("-//AIAA//DTD for Flight Dynamic
          // Models - Functions 2.0//EN",
          //                            "http://www.daveml.org/DTDs/2p0/DAVEfunc.dtd"));
          //
          //                    System.out.println();
          //
          //                    System.out.println("call to resolvePublic for MathML2 namespace
          // gives:");
          //                    System.out.println(cr.resolvePublic("-//W3C//DTD MathML 2.0//EN",
          //                            "http://www.w3.org/Math/DTD/mathml2/mathml2.dtd"));
          //
        } else {
          cr = null;
        }
        builder.setEntityResolver(cr);
        doc = builder.build(_inputStream, directory_uri);
      } catch (java.io.FileNotFoundException e) {
        errorLine = errorLine + e.getMessage();
        numberOfFailures++;
        success = false;
      } catch (java.net.UnknownHostException e) {
        errorLine = errorLine + " (network unavailable)";
        numberOfFailures++;
        success = false;
      } catch (java.net.ConnectException e) {
        errorLine = errorLine + " (connection timed out)";
        numberOfFailures++;
        success = false;
      } catch (java.io.IOException e) {
        errorLine = errorLine + " (general I/O problem)";
        numberOfFailures++;
        success = false;
      } catch (JDOMException e) {
        errorLine = errorLine + "\n" + e.getMessage();
        numberOfFailures++;
        success = false;
      }
      if (numberOfFailures == 1 && !success) {
        System.err.println(errorLine);
        System.err.println("Proceeding without validation.");
        tryValidationFlag = false;
        _inputStream.close();
      }
    }
    if (!success && numberOfFailures >= 2) {
      _inputStream.close();
      System.err.println(errorLine);
      System.err.println(
          "Unable to load file successfully (tried with and without validation), aborting.");
      System.exit(-1);
    }
    //        if (success && this.isVerbose()) {
    if (success) {
      System.out.println("Loaded '" + this.inputFileName + "' successfully, ");
      org.jdom.DocType dt = doc.getDocType();
      switch (numberOfFailures) {
        case 0: // validated against some DTD
          System.out.print("Validating against '");
          String catalogURI = cr.resolvePublic(dt.getPublicID(), dt.getSystemID());
          if (catalogURI == null) {
            System.out.print(dt.getSystemID());
          } else {
            System.out.print(catalogURI);
          }
          System.out.println(".'");
          break;
        case 1: // no validation
          System.out.println("WITHOUT validation.");
      }
    }

    return doc;
  }
  /**
   * Update or create a new datasource
   *
   * @param deploymentFile
   * @param name
   * @param config
   * @throws JDOMException
   * @throws IOException
   */
  private static void updateDatasource(File deploymentFile, String name, Configuration config)
      throws JDOMException, IOException {
    Document doc;
    Element root;

    if (deploymentFile.exists() && !deploymentFile.canWrite()) {
      throw new RuntimeException(
          "Datasource file " + deploymentFile + " is not writable. Aborting.");
    }

    if (deploymentFile.exists()) {
      SAXBuilder builder = new SAXBuilder();
      SelectiveSkippingEntityResolver entityResolver =
          SelectiveSkippingEntityResolver.getDtdAndXsdSkippingInstance();
      builder.setEntityResolver(entityResolver);

      doc = builder.build(deploymentFile);
      root = doc.getRootElement();
    } else {
      doc = new Document();
      root = new Element("datasources");
      doc.setRootElement(root);
    }

    if (!root.getName().equals("datasources")) {
      throw new RuntimeException(
          "Datasource file format exception on ["
              + deploymentFile
              + "], expected [datasources] element but found ["
              + root.getName()
              + "]");
    }

    Element datasourceElement = findDatasourceElement(root, name);

    String type = config.getSimpleValue("type", null);

    boolean isNewDatasource = false;
    if (datasourceElement == null) {
      datasourceElement = new Element(type);
      isNewDatasource = true;
    } else if (!type.equals(datasourceElement.getName())) {
      datasourceElement.setName(type);
    }

    updateElements(datasourceElement, config, COMMON_PROPS);

    if (type.equals(XA_TX_TYPE)) {
      updateElements(datasourceElement, config, XA_PROPS);
      updateMap(datasourceElement, config, CONNECTION_PROPERTY, XA_DATASOURCE_PROPERTY);
      //            updateXAElements(datasourceElement, config);
    } else {
      updateElements(datasourceElement, config, NON_XA_PROPS);
      updateMap(datasourceElement, config, CONNECTION_PROPERTY, CONNECTION_PROPERTY);
    }

    if (isNewDatasource) {
      root.addContent(datasourceElement);
    }

    updateFile(deploymentFile, doc);
  }
  public static Configuration loadDatasource(File file, String name) {
    /*
     *    <local-tx-datasource>       <jndi-name>RHQDS</jndi-name>
     * <connection-url>${rhq.server.database.connection-url}</connection-url>
     * <driver-class>${rhq.server.database.driver-class}</driver-class>
     * <user-name>${rhq.server.database.user-name}</user-name>
     * <password>${rhq.server.database.password}</password>
     *
     *     <!-- You can include connection properties that will get passed in            the
     * DriverManager.getConnection(props) call;            look at your Driver docs to see what these might be. -->
     *      <connection-property name="char.encoding">UTF-8</connection-property>       <!-- Tells an oracle
     * 10.2.0.2 driver to properly implement clobs. -->       <connection-property
     * name="SetBigStringTryClob">true</connection-property>
     *
     *     <transaction-isolation>TRANSACTION_READ_COMMITTED</transaction-isolation>
     * <min-pool-size>25</min-pool-size>       <max-pool-size>100</max-pool-size>
     * <blocking-timeout-millis>5000</blocking-timeout-millis>       <idle-timeout-minutes>15</idle-timeout-minutes>
     *       <prepared-statement-cache-size>75</prepared-statement-cache-size>
     *
     *     <type-mapping>${rhq.server.database.type-mapping}</type-mapping>
     *
     *   </local-tx-datasource>
     */
    try {
      SAXBuilder builder = new SAXBuilder();
      SelectiveSkippingEntityResolver entityResolver =
          SelectiveSkippingEntityResolver.getDtdAndXsdSkippingInstance();
      builder.setEntityResolver(entityResolver);

      Document doc = builder.build(file);

      // Get the root element
      Element root = doc.getRootElement();

      if (!root.getName().equals("datasources")) {
        return null;
      }

      Element datasourceElement = findDatasourceElement(root, name);

      if (datasourceElement == null) {
        return null;
      }

      Configuration config = new Configuration();
      String type = datasourceElement.getName();
      config.put(new PropertySimple("type", type));

      bindElements(datasourceElement, config, COMMON_PROPS);

      if (type.equals(XA_TX_TYPE)) {
        bindElements(datasourceElement, config, XA_PROPS);
        bindMap(datasourceElement, config, CONNECTION_PROPERTY, XA_DATASOURCE_PROPERTY);
        //                bindXASpecialElements(datasourceElement,config);
      } else {
        bindElements(datasourceElement, config, NON_XA_PROPS);
        bindMap(datasourceElement, config, CONNECTION_PROPERTY, CONNECTION_PROPERTY);
      }

      return config;
    } catch (IOException e) {
      log.error("IO error occurred while reading file: " + file, e);
    } catch (JDOMException e) {
      log.error("Parsing error occurred while reading file: " + file, e);
    }

    return null;
  }