private static Entry infoToPlasmidForField(Entry entry, String value, EntryField field) {
if (!entry.getRecordType().equalsIgnoreCase(EntryType.PLASMID.toString())) return entry;
Plasmid plasmid = (Plasmid) entry;
switch (field) {
case BACKBONE:
plasmid.setBackbone(value);
return plasmid;
case PROMOTERS:
plasmid.setPromoters(value);
return plasmid;
case REPLICATES_IN:
plasmid.setReplicatesIn(value);
return plasmid;
case CIRCULAR:
plasmid.setCircular(
"yes".equalsIgnoreCase(value)
|| "true".equalsIgnoreCase(value)
|| "circular".equalsIgnoreCase(value));
return plasmid;
case ORIGIN_OF_REPLICATION:
plasmid.setOriginOfReplication(value);
return plasmid;
default:
return plasmid;
}
}
protected static Entry setPlasmidFields(PlasmidData plasmidData, Entry entry) {
if (plasmidData == null) return entry;
Plasmid plasmid = (Plasmid) entry;
if (plasmidData.getBackbone() != null) plasmid.setBackbone(plasmidData.getBackbone());
if (plasmidData.getOriginOfReplication() != null)
plasmid.setOriginOfReplication(plasmidData.getOriginOfReplication());
if (plasmidData.getPromoters() != null) plasmid.setPromoters(plasmidData.getPromoters());
if (plasmidData.getReplicatesIn() != null)
plasmid.setReplicatesIn(plasmidData.getReplicatesIn());
if (plasmidData.getCircular() != null) plasmid.setCircular(plasmidData.getCircular());
return entry;
}
