private void submitSiteEventDefinitions(StudyBean site) {
FormProcessor fp = new FormProcessor(request);
ArrayList<StudyEventDefinitionBean> seds = new ArrayList<StudyEventDefinitionBean>();
CRFVersionDAO cvdao = new CRFVersionDAO(sm.getDataSource());
seds = (ArrayList<StudyEventDefinitionBean>) session.getAttribute("definitions");
HashMap<String, Boolean> changes = (HashMap<String, Boolean>) session.getAttribute("changed");
for (StudyEventDefinitionBean sed : seds) {
EventDefinitionCRFDAO edcdao = new EventDefinitionCRFDAO(sm.getDataSource());
ArrayList<EventDefinitionCRFBean> edcs = sed.getCrfs();
for (EventDefinitionCRFBean edcBean : edcs) {
int edcStatusId = edcBean.getStatus().getId();
if (edcStatusId == 5 || edcStatusId == 7) {
} else {
boolean changed = changes.get(sed.getId() + "-" + edcBean.getId());
if (changed) {
edcBean.setParentId(edcBean.getId());
edcBean.setStudyId(site.getId());
edcBean.setUpdater(ub);
edcBean.setUpdatedDate(new Date());
logger.debug("create for the site");
edcdao.create(edcBean);
}
}
}
}
session.removeAttribute("definitions");
session.removeAttribute("changed");
session.removeAttribute("sdvOptions");
}
private ArrayList<StudyEventDefinitionBean> initDefinitions(StudyBean site) {
ArrayList<StudyEventDefinitionBean> seds = new ArrayList<StudyEventDefinitionBean>();
StudyEventDefinitionDAO sedDao = new StudyEventDefinitionDAO(sm.getDataSource());
EventDefinitionCRFDAO edcdao = new EventDefinitionCRFDAO(sm.getDataSource());
CRFVersionDAO cvdao = new CRFVersionDAO(sm.getDataSource());
CRFDAO cdao = new CRFDAO(sm.getDataSource());
StudyBean parentStudy =
(StudyBean) new StudyDAO(sm.getDataSource()).findByPK(site.getParentStudyId());
seds = sedDao.findAllByStudy(parentStudy);
int start = 0;
for (StudyEventDefinitionBean sed : seds) {
int defId = sed.getId();
ArrayList<EventDefinitionCRFBean> edcs =
(ArrayList<EventDefinitionCRFBean>)
edcdao.findAllByDefinitionAndSiteIdAndParentStudyId(
defId, site.getId(), parentStudy.getId());
ArrayList<EventDefinitionCRFBean> defCrfs = new ArrayList<EventDefinitionCRFBean>();
// sed.setCrfNum(edcs.size());
for (EventDefinitionCRFBean edcBean : edcs) {
int edcStatusId = edcBean.getStatus().getId();
CRFBean crf = (CRFBean) cdao.findByPK(edcBean.getCrfId());
int crfStatusId = crf.getStatusId();
if (edcStatusId == 5 || edcStatusId == 7 || crfStatusId == 5 || crfStatusId == 7) {
} else {
ArrayList<CRFVersionBean> versions =
(ArrayList<CRFVersionBean>) cvdao.findAllActiveByCRF(edcBean.getCrfId());
edcBean.setVersions(versions);
edcBean.setCrfName(crf.getName());
CRFVersionBean defaultVersion =
(CRFVersionBean) cvdao.findByPK(edcBean.getDefaultVersionId());
edcBean.setDefaultVersionName(defaultVersion.getName());
String sversionIds = edcBean.getSelectedVersionIds();
ArrayList<Integer> idList = new ArrayList<Integer>();
if (sversionIds.length() > 0) {
String[] ids = sversionIds.split("\\,");
for (String id : ids) {
idList.add(Integer.valueOf(id));
}
}
edcBean.setSelectedVersionIdList(idList);
defCrfs.add(edcBean);
++start;
}
}
logger.debug("definitionCrfs size=" + defCrfs.size() + " total size=" + edcs.size());
sed.setCrfs(defCrfs);
sed.setCrfNum(defCrfs.size());
}
return seds;
}
private ArrayList<StudyEventDefinitionBean> createSiteEventDefinitions(StudyBean site) {
FormProcessor fp = new FormProcessor(request);
ArrayList<StudyEventDefinitionBean> seds = new ArrayList<StudyEventDefinitionBean>();
StudyBean parentStudy =
(StudyBean) new StudyDAO(sm.getDataSource()).findByPK(site.getParentStudyId());
seds = (ArrayList<StudyEventDefinitionBean>) session.getAttribute("definitions");
if (seds == null || seds.size() <= 0) {
StudyEventDefinitionDAO sedDao = new StudyEventDefinitionDAO(sm.getDataSource());
seds = sedDao.findAllByStudy(parentStudy);
}
CRFVersionDAO cvdao = new CRFVersionDAO(sm.getDataSource());
HashMap<String, Boolean> changes = new HashMap<String, Boolean>();
for (StudyEventDefinitionBean sed : seds) {
EventDefinitionCRFDAO edcdao = new EventDefinitionCRFDAO(sm.getDataSource());
ArrayList<EventDefinitionCRFBean> edcs = sed.getCrfs();
int start = 0;
for (EventDefinitionCRFBean edcBean : edcs) {
int edcStatusId = edcBean.getStatus().getId();
if (edcStatusId == 5 || edcStatusId == 7) {
} else {
String order = start + "-" + edcBean.getId();
int defaultVersionId = fp.getInt("defaultVersionId" + order);
String requiredCRF = fp.getString("requiredCRF" + order);
String doubleEntry = fp.getString("doubleEntry" + order);
String electronicSignature = fp.getString("electronicSignature" + order);
String hideCRF = fp.getString("hideCRF" + order);
int sdvId = fp.getInt("sdvOption" + order);
ArrayList<String> selectedVersionIdList = fp.getStringArray("versionSelection" + order);
int selectedVersionIdListSize = selectedVersionIdList.size();
String selectedVersionIds = "";
if (selectedVersionIdListSize > 0) {
for (String id : selectedVersionIdList) {
selectedVersionIds += id + ",";
}
selectedVersionIds = selectedVersionIds.substring(0, selectedVersionIds.length() - 1);
}
boolean changed = false;
boolean isRequired =
!StringUtil.isBlank(requiredCRF) && "yes".equalsIgnoreCase(requiredCRF.trim())
? true
: false;
boolean isDouble =
!StringUtil.isBlank(doubleEntry) && "yes".equalsIgnoreCase(doubleEntry.trim())
? true
: false;
boolean hasPassword =
!StringUtil.isBlank(electronicSignature)
&& "yes".equalsIgnoreCase(electronicSignature.trim())
? true
: false;
boolean isHide =
!StringUtil.isBlank(hideCRF) && "yes".equalsIgnoreCase(hideCRF.trim()) ? true : false;
if (edcBean.getParentId() > 0) {
int dbDefaultVersionId = edcBean.getDefaultVersionId();
if (defaultVersionId != dbDefaultVersionId) {
changed = true;
CRFVersionBean defaultVersion = (CRFVersionBean) cvdao.findByPK(defaultVersionId);
edcBean.setDefaultVersionId(defaultVersionId);
edcBean.setDefaultVersionName(defaultVersion.getName());
}
if (isRequired != edcBean.isRequiredCRF()) {
changed = true;
edcBean.setRequiredCRF(isRequired);
}
if (isDouble != edcBean.isDoubleEntry()) {
changed = true;
edcBean.setDoubleEntry(isDouble);
}
if (hasPassword != edcBean.isElectronicSignature()) {
changed = true;
edcBean.setElectronicSignature(hasPassword);
}
if (isHide != edcBean.isHideCrf()) {
changed = true;
edcBean.setHideCrf(isHide);
}
if (!StringUtil.isBlank(selectedVersionIds)
&& !selectedVersionIds.equals(edcBean.getSelectedVersionIds())) {
changed = true;
String[] ids = selectedVersionIds.split(",");
ArrayList<Integer> idList = new ArrayList<Integer>();
for (String id : ids) {
idList.add(Integer.valueOf(id));
}
edcBean.setSelectedVersionIdList(idList);
edcBean.setSelectedVersionIds(selectedVersionIds);
}
if (sdvId > 0 && sdvId != edcBean.getSourceDataVerification().getCode()) {
changed = true;
edcBean.setSourceDataVerification(SourceDataVerification.getByCode(sdvId));
}
} else {
// only if definition-crf has been modified, will it be
// saved for the site
int defaultId = defaultVersionId > 0 ? defaultVersionId : edcBean.getDefaultVersionId();
if (defaultId == defaultVersionId) {
if (isRequired == edcBean.isRequiredCRF()) {
if (isDouble == edcBean.isDoubleEntry()) {
if (hasPassword == edcBean.isElectronicSignature()) {
if (isHide == edcBean.isHideCrf()) {
if (selectedVersionIdListSize > 0) {
if (selectedVersionIdListSize == edcBean.getVersions().size()) {
if (sdvId > 0) {
if (sdvId != edcBean.getSourceDataVerification().getCode()) {
changed = true;
edcBean.setSourceDataVerification(
SourceDataVerification.getByCode(sdvId));
}
}
} else {
changed = true;
String[] ids = selectedVersionIds.split(",");
ArrayList<Integer> idList = new ArrayList<Integer>();
for (String id : ids) {
idList.add(Integer.valueOf(id));
}
edcBean.setSelectedVersionIdList(idList);
edcBean.setSelectedVersionIds(selectedVersionIds);
}
}
} else {
changed = true;
edcBean.setHideCrf(isHide);
}
} else {
changed = true;
edcBean.setElectronicSignature(hasPassword);
}
} else {
changed = true;
edcBean.setDoubleEntry(isDouble);
}
} else {
changed = true;
edcBean.setRequiredCRF(isRequired);
}
} else {
changed = true;
CRFVersionBean defaultVersion = (CRFVersionBean) cvdao.findByPK(defaultVersionId);
edcBean.setDefaultVersionId(defaultVersionId);
edcBean.setDefaultVersionName(defaultVersion.getName());
}
}
changes.put(sed.getId() + "-" + edcBean.getId(), changed);
++start;
}
}
}
session.setAttribute("changed", changes);
return seds;
}