public String _range(String args[]) {
verifyCommand(args, _rangeHelp, _rangePattern, 2, 3);
Version version = null;
if (args.length >= 3) version = new Version(args[2]);
else {
String v = domain.getProperty("@");
if (v == null) return null;
version = new Version(v);
}
String spec = args[1];
Matcher m = RANGE_MASK.matcher(spec);
m.matches();
String floor = m.group(1);
String floorMask = m.group(2);
String ceilingMask = m.group(3);
String ceiling = m.group(4);
String left = version(version, floorMask);
String right = version(version, ceilingMask);
StringBuilder sb = new StringBuilder();
sb.append(floor);
sb.append(left);
sb.append(",");
sb.append(right);
sb.append(ceiling);
String s = sb.toString();
VersionRange vr = new VersionRange(s);
if (!(vr.includes(vr.getHigh()) || vr.includes(vr.getLow()))) {
domain.error(
"${range} macro created an invalid range %s from %s and mask %s", s, version, spec);
}
return sb.toString();
}
public void testBaseUrlPath() throws Exception {
sau1 = setupSimAu(simAuConfig(tempDirPath));
createContent(sau1);
crawlContent(sau1);
CachedUrlSet cus1 = sau1.getAuCachedUrlSet();
tempDirPath2 = getTempDir().getAbsolutePath() + File.separator;
Configuration config2 = simAuConfig(tempDirPath2);
config2.put("base_url", "http://anotherhost.org/some/path/");
SimulatedArchivalUnit sau2 = setupSimAu(config2);
createContent(sau2);
crawlContent(sau2);
CachedUrlSet cus2 = sau1.getAuCachedUrlSet();
List urls1 = auUrls(sau1);
List urls2 = auUrls(sau2);
Pattern pat1 = Pattern.compile("http://www\\.example\\.com(/.*)$");
Pattern pat2 = Pattern.compile("http://anotherhost\\.org/some/path(/.*)$");
List<String> l1 = auUrls(sau1);
List<String> l2 = auUrls(sau2);
assertEquals(l1.size(), l2.size());
for (int ix = 0; ix < l1.size(); ix++) {
Matcher m1 = pat1.matcher(l1.get(ix));
assertTrue(m1.matches());
Matcher m2 = pat2.matcher(l2.get(ix));
assertTrue(m2.matches());
assertEquals(m1.group(1), m2.group(1));
}
}
protected Map<String, String> getAttributes() {
if (attributes != null) {
return attributes;
}
attributes = new HashMap<String, String>();
matcher = ADDITIONAL_ATTRIBUTES_PATTERN.matcher(firstLine);
if (matcher.find()) {
String s;
Matcher attributeMatcher;
s = matcher.group(2);
attributeMatcher = ADDITIONAL_ATTRIBUTE_PATTERN.matcher(s);
while (attributeMatcher.find()) {
String key;
String value;
key = attributeMatcher.group(1);
value = attributeMatcher.group(2);
attributes.put(key.toLowerCase(Locale.ENGLISH), value);
}
}
return attributes;
}
/**
* Get the noun and verb <roots> (i.e. 'the highest' synsets in WordNet) from the particular
* 'icfile' (Information Content) that you are applying. Store a noun <root>: a synset offset
* number of type Integer in nounroots: an ArrayList<Integer> defined in the constructor of this
* class. Store a verb <root>: a synset offset number of type Integer in verbroots: an
* ArrayList<Integer> defined in the constructor of this class.
*
* <p>An example line in an 'icfile', showing a noun <root>: 1740n 128767 ROOT
*/
private void getRoots() {
Pattern pn = Pattern.compile("[0-9]+n [0-9]+ ROOT"); // find noun <root>
Pattern pv = Pattern.compile("[0-9]+v [0-9]+ ROOT"); // find verb <root>
Matcher m = null;
String root = "";
try {
BufferedReader in = new BufferedReader(new FileReader(icfile));
String line;
while ((line = in.readLine()) != null) {
// nouns
m = pn.matcher(line);
if (m.matches()) {
root = (line.split("\\s")[0]).split("n")[0]; // !!! double split !!!
nounroots.add(Integer.parseInt(root));
}
// verbs
m = pv.matcher(line);
if (m.matches()) {
root = (line.split("\\s")[0]).split("v")[0]; // !!! double split !!!
verbroots.add(Integer.parseInt(root));
}
}
in.close();
} catch (IOException e) {
e.printStackTrace();
}
}
public class RegexTest {
public static final String DEST_REGEX = "^D\\w+\\w*$";
public static final Pattern DEST_PATTERN = Pattern.compile(DEST_REGEX);
public static Matcher DEST_MATCHER = DEST_PATTERN.matcher("");
public static final String SOURCE_REGEX = "^S\\w+\\w*$";
public static final Pattern SOURCE_PATTERN = Pattern.compile(SOURCE_REGEX);
public static Matcher SOURCE_MATCHER = SOURCE_PATTERN.matcher("");
public static final String STRING_REGEX = "^'[a-zA-Z_0-9 ]*'$";
public static final Pattern STRING_PATTERN = Pattern.compile(STRING_REGEX);
public static Matcher STRING_MATCHER = STRING_PATTERN.matcher("");
public static final String VAR_REGEX = "^\\$\\w+\\w*$";
public static final Pattern VAR_PATTERN = Pattern.compile(VAR_REGEX);
public static Matcher VAR_MATCHER = VAR_PATTERN.matcher("");
public static final String NUM_REGEX = "^[1-9]+[0-9]*|0|\\.[0-9]+|[0-9]+\\.[0-9]+$";
public static final Pattern NUM_PATTERN = Pattern.compile(NUM_REGEX);
public static Matcher NUM_MATCHER = NUM_PATTERN.matcher("");
public static void main(String[] args) {
String inputStr = null;
BufferedReader reader = new BufferedReader(new InputStreamReader(System.in));
try {
while ((inputStr = reader.readLine()) != null) {
inputStr = inputStr.trim();
if (DEST_MATCHER.reset(inputStr).matches()) {
System.out.println("Destination field!\n");
} else if (SOURCE_MATCHER.reset(inputStr).matches()) {
System.out.println("Source field!\n");
} else if (STRING_MATCHER.reset(inputStr).matches()) {
System.out.println("String literal!\n");
} else if (VAR_MATCHER.reset(inputStr).matches()) {
System.out.println("Variable!\n");
} else if (NUM_MATCHER.reset(inputStr).matches()) {
System.out.println("Number!\n");
} else {
System.out.println("Huh???\n");
}
}
} catch (Exception ioe) {
System.out.println("Exception: " + ioe.toString());
ioe.printStackTrace();
}
}
}
private static String expand(String str) {
if (str == null) {
return null;
}
StringBuilder result = new StringBuilder();
Pattern re = Pattern.compile("^(.*?)\\$\\{([^}]*)\\}(.*)");
while (true) {
Matcher matcher = re.matcher(str);
if (matcher.matches()) {
result.append(matcher.group(1));
String property = matcher.group(2);
if (property.equals("/")) {
property = "file.separator";
}
String value = System.getProperty(property);
if (value != null) {
result.append(value);
}
str = matcher.group(3);
} else {
result.append(str);
break;
}
}
return result.toString();
}
/**
* Takes a line and looks for an archive request tag. If one is found, the information from the
* tag is returned as an <CODE>ArchiveRequest</CODE>. If a tag is found, the data in the tag is
* stored in the <CODE>HashMap</CODE> provided.
*
* @param currentLine The line in which to look for the archive tag.
* @param group The <CODE>ArchiveGroup</CODE> to which to add the <CODE>ArchiveRequest</CODE>. Can
* be <CODE>null</CODE>.
* @param template The <CODE>Template</CODE> to which the <CODE>ArchiveRequest</CODE> belongs.
* @return The archive request tag data as an instance of <CODE>ArchiveRequest</CODE>, <CODE>null
* </CODE> if the line passed in does not contain an arFile tag.
*/
private ArchiveRequest parseArchiveRequestTag(
String currentLine, ArchiveGroup group, Template template) {
ArchiveRequest archiveTag;
Matcher currentMatcher = archiveRequestPattern.matcher(currentLine);
if (currentMatcher.find()) {
String fileName = currentMatcher.group(1);
archiveTag = template.getArchiveRequest(fileName);
if (archiveTag == null) {
archiveTag = new ArchiveRequest(fileName);
template.addArchiveRequest(archiveTag);
}
if (group != null) {
// Creating a new request object because the requests
// in the groups flagged as not in database will mean the
// group - request association is not in database. Requests
// in the archiveRequests map flagged as not in database
// means the request record is not there.
String requestFileName = archiveTag.getFileName();
String requestFileLocation = archiveTag.getFileLocation();
ArchiveRequest groupRequest = new ArchiveRequest(requestFileLocation, requestFileName);
group.addArchiveRequest(groupRequest);
}
} else archiveTag = null;
return archiveTag;
}
/**
* Chooses files that match the specified pattern.
*
* @param file file filter
* @param content content filter
* @param root root directory
* @return sorted file paths
* @throws InterruptedException interruption
*/
String[] filter(final String file, final String content, final IOFile root)
throws InterruptedException {
final long id = ++filterId;
final TreeSet<String> results = new TreeSet<>();
final int[] search = new TokenParser(Token.lc(Token.token(content))).toArray();
// glob pattern
final ProjectCache pc = cache(root);
if (file.contains("*") || file.contains("?")) {
final Pattern pt = Pattern.compile(IOFile.regex(file));
for (final String path : pc) {
final int offset = offset(path, true);
if (pt.matcher(path.substring(offset)).matches() && filterContent(path, search)) {
results.add(path);
if (results.size() >= MAXHITS) break;
}
if (id != filterId) throw new InterruptedException();
}
} else {
// starts-with, contains, camel case
final String pttrn = file.toLowerCase(Locale.ENGLISH).replace('\\', '/');
final HashSet<String> exclude = new HashSet<>();
final boolean pathSearch = pttrn.indexOf('/') != -1;
for (int i = 0; i < (pathSearch ? 2 : 3); i++) {
filter(pttrn, search, i, results, exclude, pathSearch, pc, id);
}
}
return results.toArray(new String[results.size()]);
}
public boolean accept(File pathname) {
if (pathname.isDirectory()) {
return true;
} else {
return pattern.matcher(pathname.getName()).matches();
}
}
static void scanfile(Scanner input, String filename, Pattern pattern) {
int numLines = 1;
while (input.hasNextLine()) {
String line = input.nextLine();
boolean matches = pattern.matcher(line).find();
if (matches && !options.reverse_match) {
messages.exit_status = messages.EXIT_SUCCESS;
if (options.filename_only) {
out.printf(filename + "\n");
return;
} else if (options.number_lines) {
out.printf(numLines + ": " + "%s:%s%n", filename, line);
} else {
out.printf("%s:%s%n", filename, line);
}
} else if (!matches && options.reverse_match) {
if (options.number_lines) {
out.printf(numLines + ": " + "%s:%s%n", filename, line);
} else {
out.printf("%s:%s%n", filename, line);
}
messages.exit_status = messages.EXIT_SUCCESS;
}
numLines++;
}
}
private InstanceList readFile() throws IOException {
String NL = System.getProperty("line.separator");
Scanner scanner = new Scanner(new FileInputStream(fileName), encoding);
ArrayList<Pipe> pipeList = new ArrayList<Pipe>();
pipeList.add(new CharSequence2TokenSequence(Pattern.compile("\\p{L}\\p{L}+")));
pipeList.add(new TokenSequence2FeatureSequence());
InstanceList testing = new InstanceList(new SerialPipes(pipeList));
try {
while (scanner.hasNextLine()) {
String text = scanner.nextLine();
text = text.replaceAll("\\x0d", "");
Pattern patten = Pattern.compile("^(.*?),(.*?),(.*)$");
Matcher matcher = patten.matcher(text);
if (matcher.find()) {
docIds.add(matcher.group(1));
testing.addThruPipe(new Instance(matcher.group(3), null, "test instance", null));
}
}
} finally {
scanner.close();
}
return testing;
}
public static String removePrimerLR(String pname) {
Matcher m = primerLRPattern.matcher(pname);
if (!m.matches()) {
throw new IllegalArgumentException(pname);
}
return m.group(1);
}
/**
* Get dependencies of a source file.
*
* @param path The canonical path of source file.
* @return Path of dependencies.
*/
private ArrayList<String> getDependencies(String path) {
if (!dependenceMap.containsKey(path)) {
ArrayList<String> dependencies = new ArrayList<String>();
Matcher m = PATTERN_REQUIRE.matcher(read(path, charset));
while (m.find()) {
// Decide which root path to use.
// Path wrapped in <> is related to root path.
// Path wrapped in "" is related to parent folder of the source file.
String root = null;
if (m.group(1).equals("<")) {
root = this.root;
} else {
root = new File(path).getParent();
}
// Get path of required file.
String required = m.group(2);
File f = new File(root, required);
if (f.exists()) {
dependencies.add(canonize(f));
} else {
App.exit("Cannot find required file " + required + " in " + path);
}
}
dependenceMap.put(path, dependencies);
}
return dependenceMap.get(path);
}
public static String getChrom(String chromName) {
Matcher m = chromPattern.matcher(chromName);
if (!m.matches()) {
return chromName;
}
return m.group(1);
}
private void copy(File workspaceDir, InputStream in, Pattern glob, boolean overwrite)
throws Exception {
Jar jar = new Jar("dot", in);
try {
for (Entry<String, Resource> e : jar.getResources().entrySet()) {
String path = e.getKey();
bnd.trace("path %s", path);
if (glob != null && !glob.matcher(path).matches()) continue;
Resource r = e.getValue();
File dest = Processor.getFile(workspaceDir, path);
if (overwrite
|| !dest.isFile()
|| dest.lastModified() < r.lastModified()
|| r.lastModified() <= 0) {
bnd.trace("copy %s to %s", path, dest);
File dp = dest.getParentFile();
if (!dp.exists() && !dp.mkdirs()) {
throw new IOException("Could not create directory " + dp);
}
IO.copy(r.openInputStream(), dest);
}
}
} finally {
jar.close();
}
}
@Override
public void actionPerformed(ActionEvent e) {
if (td.getTabCount() > 0) {
TextDocument ta = (TextDocument) td.getComponentAt(td.getSelectedIndex());
Pattern pn = Pattern.compile(tf1.getText());
Matcher mt = pn.matcher(ta.getText());
if (e.getSource() == jb2) { // 取代
ta.setText(mt.replaceAll(tf2.getText()));
} else if (e.getSource() == jb1) { // 尋找
Highlighter hl = ta.getHighlighter();
hl.removeAllHighlights();
while (mt.find()) {
try {
hl.addHighlight(
mt.start(), mt.end(), new DefaultHighlighter.DefaultHighlightPainter(null));
} catch (Exception ex) {
}
} // 開啟及關閉介面
} else if (e.getSource() == replace_searchMenuItem) {
System.out.println("Replace/Search is show:" + !show);
if (show) {
getContentPane().remove(jp);
show = false;
} else {
getContentPane().add(jp, BorderLayout.SOUTH);
show = true;
}
validate(); // 刷新容器
}
} else if (e.getSource() == replace_searchMenuItem) {
JOptionPane.showMessageDialog(
null, "尚無檔案，無法使用!", "Repace/Search error", JOptionPane.ERROR_MESSAGE);
}
}
public boolean isPresent2(String patternStr) {
Pattern p = Pattern.compile(patternStr);
Matcher m = p.matcher(string2);
boolean b = m.matches();
return b;
}
public String getArtifactIdFromCoord(String coord) {
Matcher m = COORD_P.matcher(coord);
if (m.matches()) {
return m.group(2);
} else {
return null;
}
}
public boolean accept(File f) {
if (f == null) {
return false;
}
if (f.isDirectory()) {
return true;
}
return pattern.matcher(f.getName()).matches();
}
public synchronized String format(String message) {
Matcher matcher = variablePattern.matcher(message);
while (matcher.find()) {
String variable = matcher.group();
variable = variable.substring(1);
if (variable.startsWith("{") && variable.endsWith("}"))
variable = variable.substring(1, variable.length() - 1);
String value = variables.get(variable);
if (value == null) value = "";
message =
message.replaceFirst(Pattern.quote(matcher.group()), Matcher.quoteReplacement(value));
}
matcher = colorPattern.matcher(message);
while (matcher.find())
message =
message.substring(0, matcher.start()) + "\247" + message.substring(matcher.end() - 1);
return message;
}
public Coords(String entry) {
Matcher m = coordsPattern.matcher(entry);
if (!m.matches()) {
throw new IllegalArgumentException(entry);
}
chrom = m.group(1);
start = Integer.parseInt(m.group(2));
end = Integer.parseInt(m.group(3));
strand = m.group(4).charAt(0);
}
public BasicSpellChecker(String file) throws IOException {
BufferedReader in = new BufferedReader(new FileReader(file));
Pattern p = Pattern.compile("\\w+");
for (String temp = ""; temp != null; temp = in.readLine()) {
Matcher m = p.matcher(temp.toLowerCase());
while (m.find())
nWords.put((temp = m.group()), nWords.containsKey(temp) ? nWords.get(temp) + 1 : 1);
}
in.close();
}
// todo: give options for document splitting. A line or the whole file or
// sentence splitting as now
public Iterator<List<IN>> getIterator(Reader r) {
Tokenizer<IN> tokenizer = tokenizerFactory.getTokenizer(r);
// PTBTokenizer.newPTBTokenizer(r, false, true);
List<IN> words = new ArrayList<IN>();
IN previous = tokenFactory.makeToken();
StringBuilder prepend = new StringBuilder();
/*
* This changes SGML tags into whitespace -- it should maybe be moved
* elsewhere
*/
while (tokenizer.hasNext()) {
IN w = tokenizer.next();
String word = w.get(CoreAnnotations.TextAnnotation.class);
Matcher m = sgml.matcher(word);
if (m.matches()) {
String before = StringUtils.getNotNullString(w.get(CoreAnnotations.BeforeAnnotation.class));
String after = StringUtils.getNotNullString(w.get(CoreAnnotations.AfterAnnotation.class));
prepend.append(before).append(word);
String previousTokenAfter =
StringUtils.getNotNullString(previous.get(CoreAnnotations.AfterAnnotation.class));
previous.set(AfterAnnotation.class, previousTokenAfter + word + after);
// previous.appendAfter(w.word() + w.after());
} else {
String before = StringUtils.getNotNullString(w.get(CoreAnnotations.BeforeAnnotation.class));
if (prepend.length() > 0) {
w.set(BeforeAnnotation.class, prepend.toString() + before);
// w.prependBefore(prepend.toString());
prepend = new StringBuilder();
}
words.add(w);
previous = w;
}
}
List<List<IN>> sentences = wts.process(words);
String after = "";
IN last = null;
for (List<IN> sentence : sentences) {
int pos = 0;
for (IN w : sentence) {
w.set(PositionAnnotation.class, Integer.toString(pos));
after = StringUtils.getNotNullString(w.get(CoreAnnotations.AfterAnnotation.class));
w.remove(AfterAnnotation.class);
last = w;
}
}
if (last != null) {
last.set(AfterAnnotation.class, after);
}
return sentences.iterator();
}
protected boolean shouldIgnoreBCCAddress(String address) {
MilterServerService milterService = Config.getConfig().getMilterServerService();
List<String> ignoreAddresses = milterService.getIgnoreBCCAddress();
Matcher m = headerPattern2.matcher(address.toLowerCase(Locale.ENGLISH).trim());
if (m.matches()) {
String mailAddress = m.group(1);
for (String ignoreAddress : ignoreAddresses) {
if (ignoreAddress.equalsIgnoreCase(mailAddress)) return true;
}
} else {
m = headerPattern3.matcher(address.toLowerCase(Locale.ENGLISH).trim());
if (m.matches()) {
String mailAddress = m.group(1);
for (String ignoreAddress : ignoreAddresses) {
if (ignoreAddress.equalsIgnoreCase(mailAddress)) return true;
}
}
}
return false;
}
public int getStatus() {
if (status != null) {
return status;
}
matcher = STATUS_PATTERN.matcher(firstLine);
if (matcher.find()) {
status = Integer.parseInt(matcher.group(1));
}
return status;
}
public String getResult() {
if (result != null) {
return result;
}
matcher = RESULT_PATTERN.matcher(firstLine);
if (matcher.find()) {
result = matcher.group(1);
}
return result;
}
public static int[] decodePrimerName(String pname) {
Matcher m = primerNamePattern.matcher(pname);
if (!m.matches()) {
throw new IllegalArgumentException(pname);
}
int[] a = new int[3];
a[0] = Integer.parseInt(m.group(1));
a[1] = Integer.parseInt(m.group(2));
a[2] = Integer.parseInt(m.group(3));
return a;
}
String filter(String[] args, boolean include) {
verifyCommand(args, String.format(_filterHelp, args[0]), null, 3, 3);
Collection<String> list = new ArrayList<String>(Processor.split(args[1]));
Pattern pattern = Pattern.compile(args[2]);
for (Iterator<String> i = list.iterator(); i.hasNext(); ) {
if (pattern.matcher(i.next()).matches() == include) i.remove();
}
return Processor.join(list);
}
public static void loadPermissions(URL url) throws IOException, PermissionParseException {
BufferedReader in = new BufferedReader(new InputStreamReader(url.openStream()));
String line;
Pattern ignore = Pattern.compile("^\\s*(//.*)?$");
Pattern valid =
Pattern.compile("^\\s*permission\\s+(\\S+)" + "(\\s+\"([^\"]*)\"(,\\s+\"([^\"]*)\")?)?;$");
Set<Permission> perms = new HashSet<Permission>();
while ((line = in.readLine()) != null) {
if (ignore.matcher(line).matches()) {
continue;
}
Matcher matcher = valid.matcher(line);
if (!matcher.matches()) {
throw new PermissionParseException("invalid syntax: " + line);
}
int nGroups = matcher.groupCount();
String type = matcher.group(1);
String name = expand(nGroups >= 3 ? matcher.group(3) : null);
String actions = expand(nGroups >= 5 ? matcher.group(5) : null);
try {
Permission perm = getPermission(type, name, actions);
perms.add(perm);
} catch (Throwable e) {
String message =
String.format(
"could not instantiate permission: " + "type=%s name=%s actions=",
type, name, actions);
throw new PermissionParseException(message, e);
}
}
in.close();
permSet.addAll(perms);
}
public String[] list(String regex) {
Pattern pattern = Pattern.compile(regex);
ArrayList<String> slist = new ArrayList<String>();
int count = 0;
for (String s : dirList) {
if (pattern.matcher(s).matches()) {
count++;
slist.add(s);
}
}
return slist.toArray(new String[count]);
}
