public static void maxFlow(ListGraph g) {
ListGraph residualG = g.residualGraph();
LinkedList<DirEdge> path = residualG.getFlowPath();
while (path != null) {
// System.out.println("Got path");
int minCapacity = ListGraph.minCapacityInPath(path);
assert minCapacity > 0;
// augment every edge on the path in the original graph
int head = g.getSource();
ListIterator it = path.listIterator();
while (it.hasNext()) {
DirEdge rEdge = (DirEdge) it.next();
int tail = rEdge.end;
DirEdge e = g.getEdge(head, tail);
e.flow += minCapacity;
// System.out.println("Augmenting (" + head + "," + tail + ") to be " + e.flow);
head = tail;
}
residualG = g.residualGraph();
// System.out.println("g:");
// g.print();
// System.out.println("Residual graph:");
// residualG.print();
path = residualG.getFlowPath();
}
}
/** Sorts the static LinkedList mainlineLinks in the order they appear on the freeway */
private LinkedList<Link> recursiveLinkSort(LinkedList<Link> links2) {
if (links2.size() == 1) {
return links2;
} else {
boolean swapMade = false;
ListIterator<Link> itr1 = links2.listIterator();
while (itr1.hasNext()) {
Link temp = itr1.next();
int tempindex = itr1.nextIndex();
// if this loop makes any switches, set the flag to true
if (links2.getFirst().getUpNode().getNodeID() == temp.getDownNode().getNodeID()) {
swapMade = true;
links2.addFirst(temp);
links2.remove(tempindex);
return this.recursiveLinkSort(links2);
}
}
if (!swapMade) {
// assign last n-1 links to links3
LinkedList<Link> links3 = new LinkedList<Link>();
Link temp = links2.getFirst();
links2.removeFirst();
links3 = this.recursiveLinkSort(links2);
links3.addFirst(temp);
return links3;
} else {
return links2;
}
}
}
/** listIterator only returns those elements after the given index */
public void testListIterator2() {
List full = populatedArray(3);
ListIterator i = full.listIterator(1);
int j;
for (j = 0; i.hasNext(); j++) assertEquals(j + 1, ((Integer) i.next()).intValue());
assertEquals(2, j);
}
/**
* Reads an array of strings from the TIFF file.
*
* @param count Number of strings to read
* @param value Offset from which to read
*/
protected String[] readASCIIArray(long count, long value) throws IOException {
_raf.seek(value);
int nstrs = 0;
List list = new LinkedList();
byte[] buf = new byte[(int) count];
_raf.read(buf);
StringBuffer strbuf = new StringBuffer();
for (int i = 0; i < count; i++) {
int b = buf[i];
if (b == 0) {
list.add(strbuf.toString());
strbuf.setLength(0);
} else {
strbuf.append((char) b);
}
}
/* We can't use ArrayList.toArray because that returns an
Object[], not a String[] ... sigh. */
String[] strs = new String[nstrs];
ListIterator iter = list.listIterator();
for (int i = 0; i < nstrs; i++) {
strs[i] = (String) iter.next();
}
return strs;
}
public String hasSameContent(JarFile2 file, JarEntry entry) throws IOException {
String thisName = null;
Long crcL = new Long(entry.getCrc());
// check if this jar contains files with the passed in entry's crc
if (_crcToEntryMap.containsKey(crcL)) {
// get the Linked List with files with the crc
LinkedList ll = (LinkedList) _crcToEntryMap.get(crcL);
// go through the list and check for content match
ListIterator li = ll.listIterator(0);
if (li != null) {
while (li.hasNext()) {
JarEntry thisEntry = (JarEntry) li.next();
// check for content match
InputStream oldIS = getJarFile().getInputStream(thisEntry);
InputStream newIS = file.getJarFile().getInputStream(entry);
if (!differs(oldIS, newIS)) {
thisName = thisEntry.getName();
return thisName;
}
}
}
}
return thisName;
}
public DirEdge getEdge(int i, int j) {
ListIterator it = edges.get(i).listIterator();
while (it.hasNext()) {
DirEdge edge = (DirEdge) it.next();
if (edge.end == j) {
return edge;
}
}
return null;
}
/*
* Print the action sequence (Probably) to the printer
*/
public void actionPrint(PrintWriter ps) {
int i = 0;
ps.println("Stepper - action sequence");
ps.println("Task ID - " + curTask);
ps.println();
ListIterator li = actionSequence.listIterator();
while (li.hasNext()) {
i++;
oclPredicate pred = (oclPredicate) li.next();
ps.println(i + ": " + pred.toString());
}
}
public static String writeGridOfRateCoeffs(ReactionModel p_reactionModel) {
StringBuilder result = new StringBuilder();
LinkedList pDepList = new LinkedList();
CoreEdgeReactionModel cerm = (CoreEdgeReactionModel) p_reactionModel;
for (Iterator iter = PDepNetwork.getNetworks().iterator(); iter.hasNext(); ) {
PDepNetwork pdn = (PDepNetwork) iter.next();
for (ListIterator pdniter = pdn.getNetReactions().listIterator(); pdniter.hasNext(); ) {
PDepReaction rxn = (PDepReaction) pdniter.next();
if (cerm.categorizeReaction(rxn) != 1) continue;
// check if this reaction is not already in the list and also check if this reaction has a
// reverse reaction
// which is already present in the list.
if (rxn.getReverseReaction() == null) rxn.generateReverseReaction();
if (!rxn.reactantEqualsProduct()
&& !pDepList.contains(rxn)
&& !pDepList.contains(rxn.getReverseReaction())) {
pDepList.add(rxn);
}
}
}
Temperature[] tempsUsedInFame = PDepRateConstant.getTemperatures();
int numTemps = tempsUsedInFame.length;
Pressure[] pressUsedInFame = PDepRateConstant.getPressures();
int numPress = pressUsedInFame.length;
for (int i = 0; i < numTemps; i++) {
for (int j = 0; j < numPress; j++) {
result.append(
"T=" + tempsUsedInFame[i].getK() + "K,P=" + pressUsedInFame[j].getBar() + "bar\t");
}
result.append("\n");
}
result.append("\n");
for (Iterator iter = pDepList.iterator(); iter.hasNext(); ) {
PDepReaction r = (PDepReaction) iter.next();
result.append(r.toString() + "\n");
double[][] rates = new double[numTemps][numPress];
rates = r.getPDepRate().getRateConstants();
for (int i = 0; i < numTemps; i++) {
for (int j = 0; j < numPress; j++) {
result.append(rates[i][j] + "\t");
}
result.append("\n");
}
result.append("\n");
}
return result.toString();
}
public double getBalance() {
double totalBal = 0.0;
if (cardCount() == 0) return 0.0;
else {
ListIterator iter = cards.dataIterator();
while (iter.hasNext()) {
CreditCard tmp = (CreditCard) iter.next();
totalBal += tmp.getCredit();
}
}
return totalBal;
}
public static int minCapacityInPath(LinkedList<DirEdge> path) {
int minCapacity = Integer.MAX_VALUE;
ListIterator it = path.listIterator();
while (it.hasNext()) {
DirEdge e = (DirEdge) it.next();
if (e.capacity < minCapacity) {
minCapacity = e.capacity;
}
}
return minCapacity;
}
public void print() {
for (int i = 0; i < v; i++) {
ListIterator it = edges.get(i).listIterator();
while (it.hasNext()) {
DirEdge edge = (DirEdge) it.next();
System.out.print("->" + edge.end + "(" + edge.flow + "/" + edge.capacity + ")");
}
System.out.println();
}
}
/**
* Returns the first entity under a point of the map, in the specified layer.
*
* @param layer the layer
* @param x x of the point
* @param y y of the point
* @return the entity found, or null if there is no entity here
*/
public MapEntity getEntityAt(Layer layer, int x, int y) {
MapEntities entities = allEntities[layer.getId()];
ListIterator<MapEntity> iterator = entities.listIterator(entities.size());
while (iterator.hasPrevious()) {
MapEntity entity = iterator.previous();
if (entity.containsPoint(x, y)) {
return entity;
}
}
return null;
}
/**
* Insert the list of <code>newPasses</code> into <code>passes</code> immediately after the pass
* named <code>id</code>.
*/
public void afterPass(List passes, Pass.ID id, List newPasses) {
for (ListIterator i = passes.listIterator(); i.hasNext(); ) {
Pass p = (Pass) i.next();
if (p.id() == id) {
for (Iterator j = newPasses.iterator(); j.hasNext(); ) {
i.add(j.next());
}
return;
}
}
throw new InternalCompilerError("Pass " + id + " not found.");
}
private void relabelToFront() {
assert (!V.isEmpty()) : "No vertices";
ListIterator<Vertex> iter = V.listIterator();
while (iter.hasNext()) {
Vertex v = iter.next();
// System.out.println("Considering vertex: " + v);
int oldHeight = v.getHeight();
discharge(v);
if (v.getHeight() > oldHeight) {
iter.remove();
V.addFirst(v);
iter = V.listIterator(1);
}
}
}
void removeUnboundConnections() {
ListIterator<Long> iter = UnboundConnections.listIterator(0);
while (iter.hasNext()) {
long b = iter.next();
EventableChannel ec = Connections.remove(b);
if (ec != null) {
eventCallback(b, EM_CONNECTION_UNBOUND, null);
ec.close();
EventableSocketChannel sc = (EventableSocketChannel) ec;
if (sc != null && sc.isAttached()) DetachedConnections.add(sc);
}
}
UnboundConnections.clear();
}
/** Remove the pass named <code>id</code> from <code>passes</code>. */
public void removePass(List passes, Pass.ID id) {
for (ListIterator i = passes.listIterator(); i.hasNext(); ) {
Pass p = (Pass) i.next();
if (p.id() == id) {
if (p instanceof BarrierPass) {
throw new InternalCompilerError("Cannot remove a barrier pass.");
}
i.remove();
return;
}
}
throw new InternalCompilerError("Pass " + id + " not found.");
}
void runTimers() {
long now = new Date().getTime();
while (!Timers.isEmpty()) {
long k = Timers.firstKey();
if (k > now) break;
ArrayList<Long> callbacks = Timers.get(k);
Timers.remove(k);
// Fire all timers at this timestamp
ListIterator<Long> iter = callbacks.listIterator(0);
while (iter.hasNext()) {
eventCallback(0, EM_TIMER_FIRED, null, iter.next().longValue());
}
}
}
public void configureCar(Automotive car) {
System.out.println("Configure the Car-\nPlease enter option choice.");
Scanner read = new Scanner(System.in);
ListIterator<String> it = car.getOptionSetNamesIterator();
while (it.hasNext()) {
String optionSetName = it.next().toString();
System.out.println(optionSetName + ":");
try {
car.setOptionChoice(optionSetName, read.nextLine());
} catch (InvalidOptionException e) {
e.fixException();
}
}
car.calculateFinalPrice();
System.out.println("\nFinal Configuration-");
car.printFinalConfig();
}
/**
* Brings the specified entities to the back, keeping their layer. The order of the specified
* entities in the map is unchanged.
*
* @param entities the entities to move
*/
public void bringToBack(List<MapEntity> entities) {
List<MapEntity> sortedEntities = getSortedEntities(entities);
// bring to back each entity from sortedEntities
ListIterator<MapEntity> iterator = sortedEntities.listIterator(sortedEntities.size());
while (iterator.hasPrevious()) {
MapEntity entity = iterator.previous();
Layer layer = entity.getLayer();
allEntities[layer.getId()].remove(entity);
allEntities[layer.getId()].addFirst(entity);
}
setChanged();
notifyObservers();
}
/**
* Brings the specified entities to the front, keeping their layer. The order of the specified
* entities in the map is unchanged.
*
* @param entities the entities to move
*/
public void bringToFront(List<MapEntity> entities) {
List<MapEntity> sortedEntities = getSortedEntities(entities);
// bring to front each entity from sortedEntities
ListIterator<MapEntity> iterator = sortedEntities.listIterator(0);
while (iterator.hasNext()) {
MapEntity entity = iterator.next();
Layer layer = entity.getLayer();
allEntities[layer.getId()].remove(entity);
allEntities[layer.getId()].addLast(entity);
}
setChanged();
notifyObservers();
}
public ListGraph residualGraph() {
ListGraph residualG = new ListGraph(getNumNodes(), this.source, this.sink);
for (int i = 0; i < v; i++) {
ListIterator it = edges.get(i).listIterator();
while (it.hasNext()) {
DirEdge edge = (DirEdge) it.next();
int leftCapacity = edge.capacity - edge.flow;
if (leftCapacity > 0) residualG.addEdge(i, edge.end, leftCapacity);
if (edge.flow > 0)
residualG.addEdge(edge.end, i, edge.flow); // add the reverse direction capacity
}
}
return residualG;
}
/**
* Insert the list of <code>newPasses</code> into <code>passes</code> immediately before the pass
* named <code>id</code>.
*/
public void beforePass(List passes, Pass.ID id, List newPasses) {
for (ListIterator i = passes.listIterator(); i.hasNext(); ) {
Pass p = (Pass) i.next();
if (p.id() == id) {
// Backup one position.
i.previous();
for (Iterator j = newPasses.iterator(); j.hasNext(); ) {
i.add(j.next());
}
return;
}
}
throw new InternalCompilerError("Pass " + id + " not found.");
}
public static void dumpcode(final MethodEditor m) {
final PrintWriter out = new PrintWriter(System.out, true);
final StackHeightCounter shc = new StackHeightCounter(m);
out.println("Code for method " + m.name() + m.type());
final List instructions = m.code();
final ListIterator iter = instructions.listIterator();
while (iter.hasNext()) {
final Object obj = iter.next();
if (obj instanceof Label) {
shc.handle((Label) obj);
} else if (obj instanceof Instruction) {
shc.handle((Instruction) obj);
}
System.out.println(" " + obj + " (sh: " + shc.height() + ")");
}
}
public LinkedList<DirEdge> getFlowPath() {
// do a depth first search to see if there is path from source to the sink
boolean[] visited = new boolean[v];
Arrays.fill(visited, false);
Stack<Integer> tobeVisited = new Stack<Integer>();
tobeVisited.push(source);
int[] predecessor = new int[v];
Arrays.fill(predecessor, -1);
while (!tobeVisited.isEmpty()) {
int vertex = tobeVisited.pop();
if (!visited[vertex]) {
// System.out.println("Visiting " + vertex);
visited[vertex] = true;
// put vertex's next hop nodes into the stack
ListIterator it = edges.get(vertex).listIterator();
while (it.hasNext()) {
DirEdge e = (DirEdge) it.next();
if (predecessor[e.end] == -1) {
predecessor[e.end] = vertex;
}
if (e.end == sink) {
return constructPath(predecessor);
}
if (!visited[e.end]) {
tobeVisited.push(e.end);
}
}
}
}
return null; // we cannot find an augment path
}
void close() {
try {
if (mySelector != null) mySelector.close();
} catch (IOException e) {
}
mySelector = null;
// run down open connections and sockets.
Iterator<ServerSocketChannel> i = Acceptors.values().iterator();
while (i.hasNext()) {
try {
i.next().close();
} catch (IOException e) {
}
}
// 29Sep09: We create an ArrayList of the existing connections, then iterate over
// that to call unbind on them. This is because an unbind can trigger a reconnect,
// which will add to the Connections HashMap, causing a ConcurrentModificationException.
// XXX: The correct behavior here would be to latch the various reactor methods to return
// immediately if the reactor is shutting down.
ArrayList<EventableChannel> conns = new ArrayList<EventableChannel>();
Iterator<EventableChannel> i2 = Connections.values().iterator();
while (i2.hasNext()) {
EventableChannel ec = i2.next();
if (ec != null) {
conns.add(ec);
}
}
Connections.clear();
ListIterator<EventableChannel> i3 = conns.listIterator(0);
while (i3.hasNext()) {
EventableChannel ec = i3.next();
eventCallback(ec.getBinding(), EM_CONNECTION_UNBOUND, null);
ec.close();
EventableSocketChannel sc = (EventableSocketChannel) ec;
if (sc != null && sc.isAttached()) DetachedConnections.add(sc);
}
ListIterator<EventableSocketChannel> i4 = DetachedConnections.listIterator(0);
while (i4.hasNext()) {
EventableSocketChannel ec = i4.next();
ec.cleanup();
}
DetachedConnections.clear();
}
void addNewConnections() {
ListIterator<EventableSocketChannel> iter = DetachedConnections.listIterator(0);
while (iter.hasNext()) {
EventableSocketChannel ec = iter.next();
ec.cleanup();
}
DetachedConnections.clear();
ListIterator<Long> iter2 = NewConnections.listIterator(0);
while (iter2.hasNext()) {
long b = iter2.next();
EventableChannel ec = Connections.get(b);
if (ec != null) {
try {
ec.register();
} catch (ClosedChannelException e) {
UnboundConnections.add(ec.getBinding());
}
}
}
NewConnections.clear();
}
// ---------------------------------------------------------------------------
private BuildAction addToBuildQueue(String target, boolean primaryTarget, int insertPosition)
throws TablesawException {
// The target was already checked and does not need to be built
if (m_noBuildCache.contains(target)) return (null);
Debug.print("addToBuildQueue(" + target + ", " + primaryTarget + ", " + insertPosition + ")");
Debug.indent();
Rule trule = findTargetRule(target);
CachedFile targetFile = null;
BuildAction[] buildDep = null;
BuildAction targetBA = null;
BuildAction depBA = null;
BuildAction ret = null;
if (trule == null) {
targetFile = m_fileManager.locateFile(target);
// TODO: Add the rule that required this target to the error message
if (targetFile == null)
throw new TablesawException("Unable to locate rule for '" + target + "'");
if (m_sourceFiles != null)
m_sourceFiles.add(
new File(
targetFile.getPath())); // Doing this because locateFile will return a CachedFile
// TODO: check file against cache file stamps and if changed return dummy rule
Debug.print("Cache lookup for " + targetFile.getPath());
// Add file to cache for next run
m_newModificationCache.put(targetFile.getPath(), targetFile.lastModified());
Long cacheModTime = m_modificationCache.get(targetFile.getPath());
if (cacheModTime != null) {
Debug.print("Cache hit " + cacheModTime + ":" + targetFile.lastModified());
if (cacheModTime != targetFile.lastModified()) {
Debug.print("returning obj for " + targetFile);
Debug.popIndent();
targetBA =
new BuildAction(
m_fileManager, new ModifiedFileRule(targetFile.getPath()), m_classAnnotations);
m_buildQueue.add(insertPosition, targetBA);
return (targetBA);
}
} else Debug.print("Cache miss");
// System.out.println("File "+targetFile);
m_noBuildCache.add(target);
Debug.print("Target " + target + " is a file with no rule");
Debug.popIndent();
return (null);
}
if ((m_sourceFiles != null) && (trule instanceof SourceFileSet)) {
m_sourceFiles.addAll(((SourceFileSet) trule).getSourceFiles());
}
long targetTime = 0;
boolean tExists = true;
boolean tDir = false;
boolean tPhony = true;
boolean rebuild = false;
targetBA = new BuildAction(m_fileManager, trule, m_classAnnotations);
int index;
if (m_buildQueueCache.containsKey(targetBA)) {
// Get the build action from the queue
targetBA = m_buildQueueCache.get(targetBA);
Debug.print("target: " + trule + " already in build queue.");
// Target has already been added to build queue
Debug.popIndent();
return (targetBA);
}
File f;
trule.preBuild(m_depCache, m_modificationCache);
// NOTE: need to add in dependencies that are individually declared
// NOTE: getPrerequisites is also where dependency parsing happens to include C headers and
// other java classes
// String[] prereqs = getPrerequisites(trule, true);
List<String> prereqs = new ArrayList<String>();
for (String dn : trule.getDependNames()) {
Debug.print("adding depend name " + dn);
prereqs.add(dn);
}
for (Rule r : trule.getDependRules()) {
Debug.print("adding depend rule " + r);
if (r.getName() == null) {
// Generate name for rule
String genRuleName = NAMED_RULE_PREFIX + (m_ruleNameCounter++);
r.setName(genRuleName);
m_nameRuleMap.put(genRuleName, r);
}
prereqs.add(r.getName());
}
Debug.print("rule dependents " + prereqs.size());
if (prereqs.size() > 0) {
ListIterator<String> it = prereqs.listIterator();
while (it.hasNext()) {
String prereq = it.next();
if (prereq.equals(target))
throw new TablesawException("Target " + target + " depends on itself");
/* //See if the prereq is the name of a rule first
Rule nameRule = m_nameRuleMap.get(prereq);
//Add the new rule targets to the prereqs list
// TODO: some kind of check so we dont add the same named rule again and again.
if (nameRule != null)
{
Iterable<String> ruleTargets = nameRule.getTargets();
boolean hasTargets = false;
for (String t : ruleTargets)
{
hasTargets = true;
it.add(t);
it.previous();
}
if (hasTargets)
continue;
} */
// Add dependencies to build queue first.
// f = m_fileManager.getFile(prereq);
if ((depBA = addToBuildQueue(prereq, false, insertPosition)) != null) {
targetBA.addDependency(depBA);
// trule.addNewerDepend(prereq);
if (depBA.isBinding()) {
Debug.print("Rebuild: " + trule + " because rebuild of " + depBA.getTargetRule());
rebuild = true;
}
}
}
}
if (!rebuild) {
rebuild = trule.needToRun();
Debug.print("Rule needToRun() returned " + rebuild);
}
// TODO: change this to get depends from above and check if no depends
if ((!rebuild)
&& (primaryTarget
&& (!trule
.getTargets()
.iterator()
.hasNext()))) { // If target is the primary target and it has no targets
Debug.print("Adding primary target: " + trule + " to build queue.");
rebuild = true;
}
if (rebuild) { // Add target to build queue
m_buildQueue.add(insertPosition, targetBA);
m_buildQueueCache.put(targetBA, targetBA);
Debug.print("Adding " + targetBA + " to build queue at pos " + insertPosition);
// System.out.println("Adding "+targetBA+" to build queue at pos "+insertPosition);
ret = targetBA;
}
// Add target to cache if it does not need to be built
// This is to speed up incremental builds
if (ret == null) m_noBuildCache.add(target);
Debug.popIndent();
return (ret);
}
public static void runPhraseSpellCheck() throws Exception {
String S, collocatedString = "";
Scanner enable = new Scanner(new File("/home/tanmay/workspace/SpellCheck/src/enable1.txt"));
while (enable.hasNext()) {
S = enable.next();
// a = input.nextLong();
// System.out.print(S+"\t"+ a+"\t");
correctWords.add(S);
}
enable = new Scanner(new File("/home/tanmay/workspace/SpellCheck/src/stop.txt"));
while (enable.hasNext()) {
S = enable.next();
// a = input.nextLong();
// System.out.print(S+"\t"+ a+"\t");
stopWords.add(S);
}
ArrayList<String> misspeltWords = new ArrayList<String>();
ArrayList<Integer> misspeltWordsIndex = new ArrayList<Integer>();
ArrayList<String> corrections = new ArrayList<String>();
ArrayList<String> finalCorrections = new ArrayList<String>();
ArrayList<String> phraseWords = new ArrayList<String>();
int count;
WordCheck w = new WordCheck();
w.createDictionary();
w.createConfusionMatrix();
double candidateScore = 0;
PhraseCheck p = new PhraseCheck();
p.createNgrams();
System.out.println("Preprocessing Done");
String input = null;
String phrase = null;
BufferedReader br =
new BufferedReader(
new FileReader(new File("/home/tanmay/workspace/SpellCheck/src/phrases.txt")));
while ((input = br.readLine()) != null) {
long t1 = System.currentTimeMillis();
misspeltWords.clear();
misspeltWordsIndex.clear();
// phrase = input.toLowerCase();
phrase = input;
// String[] words = null;
ArrayList<String> words = new ArrayList<String>();
String[] words1 = phrase.split(" ");
/* for(int i=0;i<words1.length;i++)
{
System.out.print(words1[i] + " ");
}*/
for (int wordc = 0; wordc < words1.length / 2; wordc++) {
words.add(words1[wordc]);
}
/*
for(int wordCount=0;wordCount<words.length;wordCount++)
{
phraseWords.add(words[wordCount]);
}
for (String word : phraseWords)
{
if(!correctWords.contains(word)&&!stopWords.contains(word))
{
misspeltWords.add(word);
misspeltWordsIndex.add(phraseWords.indexOf(word));
}
}*/
int wordc1 = 0;
for (String word : words) {
// System.out.println("Wordc = " + wordc1);
if (!correctWords.contains(word) && !stopWords.contains(word)) {
misspeltWords.add(word);
// System.out.println("Word is "+word);
misspeltWordsIndex.add(wordc1);
}
wordc1++;
}
wordc1 = 0;
// System.out.println(misspeltWords);
/*Collocation Based*/
/*
int misspeltWordCount = 0;
for (String misspeltWord : misspeltWords)
{
w.getCandidates(misspeltWord);
corrections = w.candidates;
candidateScores.clear();
for(String correction : corrections)
{
for(int collocSizeLeft = 1;collocSizeLeft<MAXCONTEXTSIZE;collocSizeLeft++)
{
for(int collocSizeRight = 1;collocSizeRight<MAXCONTEXTSIZE;collocSizeRight++)
{
collocatedString= "";
for(int size = 0;size<collocSizeLeft;size++)
{
if(!(misspeltWordsIndex.get(misspeltWordCount)-size<0))
collocatedString += phraseWords.get(misspeltWordsIndex.get(misspeltWordCount)-size)+" ";
}
collocatedString +=correction;
for(int size = 0;size<collocSizeRight;size++)
{
if(misspeltWordsIndex.get(misspeltWordCount)+size<phraseWords.size())
collocatedString += phraseWords.get(misspeltWordsIndex.get(misspeltWordCount)-size)+" ";
}
collocatedString = collocatedString.substring(0,collocatedString.length());
}
if(collocatedString.length()<6 && collocatedString.length()>1)
{
candidateScore += p.NgramsFull[collocatedString.length()-2].get(collocatedString);
}
}
candidateScores.put(correction, candidateScore);
candidateScore = 0.0;
}
misspeltWordCount++;
}
*/
/* Context Based*/
// System.out.println(words1.length);
for (String misspeltword : misspeltWords) {
float score = 0;
// System.out.println(words1.length);
// System.out.println("wordc =" + wordc1 + "words1.length/2 " + words1.length/2 +
// "misspeltwordindex " +misspeltWordsIndex.get(wordc1) );
int total = misspeltWordsIndex.get(wordc1) + words1.length / 2;
// System.out.println("Total = " + total );
String correctWord = words1[misspeltWordsIndex.get(wordc1) + words1.length / 2];
// System.out.println("Correct Word " + correctWord);
wordc1++;
finalCorrections.clear();
candidateScores.clear();
w.getCandidates(misspeltword);
corrections = w.candidates;
// System.out.println(corrections);
// System.out.println("Over");
/* System.out.println(p.Ngrams[0].get("ground turmeric"));
System.out.println(p.Ngrams[1].get("baby carriage"));
System.out.println(p.Ngrams[2].get("moon earth"));
System.out.println(p.Ngrams[3].get("perspective society"));*/
for (String correction : corrections) {
if (!stopWords.contains(correction)) {
candidateScore = 0;
candidateScores.put(correction, 0.0);
for (String word : words) {
if (!stopWords.contains(word)) {
for (int i = 0; i < 4; i++) {
if (p.Ngrams[i].containsKey(correction + " " + word))
candidateScore += p.Ngrams[i].get(correction + " " + word);
else candidateScore += 0;
}
}
}
candidateScores.put(correction, candidateScore);
}
}
LinkedHashMap<String, Double> map = w.sortByValues(candidateScores);
// System.out.println(map);
ListIterator<String> iter = new ArrayList(map.keySet()).listIterator(map.size());
while (iter.hasPrevious()) {
String key = iter.previous();
// System.out.println(key);
if (map.get(key) != 0.0) {
finalCorrections.add(key);
} else break;
if (finalCorrections.size() == 3) break;
}
// Interpolation
while (finalCorrections.size() < 3) {
for (int q = 0; q < corrections.size(); q++) {
if (!finalCorrections.contains(corrections.get(q))
&& !stopWords.contains(corrections.get(q)))
finalCorrections.add(corrections.get(q));
if (finalCorrections.size() == 3) break;
}
}
System.out.println(System.currentTimeMillis() - t1);
int wc1 = 0;
for (String word : finalCorrections) {
if (word.equals(correctWord)) score = 1 / (float) (wc1 + 1);
}
System.out.println(misspeltword + " " + finalCorrections + "Score = " + score);
}
}
}
/**
* Process the specified HTTP request, and create the corresponding HTTP response (or forward to
* another web component that will create it). Return an <code>ActionForward</code> instance
* describing where and how control should be forwarded, or <code>null</code> if the response has
* already been completed.
*
* @param mapping The ActionMapping used to select this instance
* @param form The optional ActionForm bean for this request (if any)
* @param request The HTTP request we are processing
* @param response The HTTP response we are creating
* @exception Exception if business logic throws an exception
*/
public ActionForward execute(
ActionMapping mapping,
ActionForm form,
HttpServletRequest request,
HttpServletResponse response)
throws Exception {
// Extract attributes we will need
MessageResources messages = getResources(request);
// save errors
ActionMessages errors = new ActionMessages();
// START check for login (security)
if (!SecurityService.getInstance().checkForLogin(request.getSession(false))) {
return (mapping.findForward("welcome"));
}
// END check for login (security)
// START get id of current project from either request, attribute, or cookie
// id of project from request
String projectId = null;
projectId = request.getParameter("projectViewId");
// check attribute in request
if (projectId == null) {
projectId = (String) request.getAttribute("projectViewId");
}
// id of project from cookie
if (projectId == null) {
projectId = StandardCode.getInstance().getCookie("projectViewId", request.getCookies());
}
// default project to last if not in request or cookie
if (projectId == null) {
java.util.List results = ProjectService.getInstance().getProjectList();
ListIterator iterScroll = null;
for (iterScroll = results.listIterator(); iterScroll.hasNext(); iterScroll.next()) {}
iterScroll.previous();
Project p = (Project) iterScroll.next();
projectId = String.valueOf(p.getProjectId());
}
Integer id = Integer.valueOf(projectId);
// END get id of current project from either request, attribute, or cookie
// get project
Project p = ProjectService.getInstance().getSingleProject(id);
// get user (project manager)
User u =
UserService.getInstance()
.getSingleUserRealName(
StandardCode.getInstance().getFirstName(p.getPm()),
StandardCode.getInstance().getLastName(p.getPm()));
// START process pdf
try {
PdfReader reader = new PdfReader("C://templates/CL01_001.pdf"); // the template
// save the pdf in memory
ByteArrayOutputStream pdfStream = new ByteArrayOutputStream();
// the filled-in pdf
PdfStamper stamp = new PdfStamper(reader, pdfStream);
// stamp.setEncryption(true, "pass", "pass", PdfWriter.AllowCopy | PdfWriter.AllowPrinting);
AcroFields form1 = stamp.getAcroFields();
Date cDate = new Date();
Integer month = cDate.getMonth();
Integer day = cDate.getDate();
Integer year = cDate.getYear() + 1900;
String[] monthName = {
"January",
"February",
"March",
"April",
"May",
"June",
"July",
"August",
"September",
"October",
"November",
"December"
};
// set the field values in the pdf form
// form1.setField("", projectId)
form1.setField("currentdate", monthName[month] + " " + day + ", " + year);
form1.setField(
"firstname", StandardCode.getInstance().noNull(p.getContact().getFirst_name()));
form1.setField("pm", p.getPm());
form1.setField("emailpm", u.getWorkEmail1());
if (u.getWorkPhoneEx() != null && u.getWorkPhoneEx().length() > 0) { // ext present
form1.setField(
"phonepm",
StandardCode.getInstance().noNull(u.getWorkPhone())
+ " ext "
+ StandardCode.getInstance().noNull(u.getWorkPhoneEx()));
} else { // no ext present
form1.setField("phonepm", StandardCode.getInstance().noNull(u.getWorkPhone()));
}
form1.setField("faxpm", StandardCode.getInstance().noNull(u.getLocation().getFax_number()));
form1.setField("postalpm", StandardCode.getInstance().printLocation(u.getLocation()));
// START add images
// if(u.getPicture() != null && u.getPicture().length() > 0) {
// PdfContentByte over;
// Image img = Image.getInstance("C:/Program Files (x86)/Apache Software
// Foundation/Tomcat 7.0/webapps/logo/images/" + u.getPicture());
// img.setAbsolutePosition(200, 200);
// over = stamp.getOverContent(1);
// over.addImage(img, 54, 0,0, 65, 47, 493);
// }
// END add images
form1.setField("productname", StandardCode.getInstance().noNull(p.getProduct()));
form1.setField("project", p.getNumber() + p.getCompany().getCompany_code());
form1.setField("description", StandardCode.getInstance().noNull(p.getProductDescription()));
form1.setField("additional", p.getProjectRequirements());
// get sources and targets
StringBuffer sources = new StringBuffer("");
StringBuffer targets = new StringBuffer("");
if (p.getSourceDocs() != null) {
for (Iterator iterSource = p.getSourceDocs().iterator(); iterSource.hasNext(); ) {
SourceDoc sd = (SourceDoc) iterSource.next();
sources.append(sd.getLanguage() + " ");
if (sd.getTargetDocs() != null) {
for (Iterator iterTarget = sd.getTargetDocs().iterator(); iterTarget.hasNext(); ) {
TargetDoc td = (TargetDoc) iterTarget.next();
if (!td.getLanguage().equals("All")) targets.append(td.getLanguage() + " ");
}
}
}
}
form1.setField("source", sources.toString());
form1.setField("target", targets.toString());
form1.setField(
"start",
(p.getStartDate() != null)
? DateFormat.getDateInstance(DateFormat.SHORT).format(p.getStartDate())
: "");
form1.setField(
"due",
(p.getDueDate() != null)
? DateFormat.getDateInstance(DateFormat.SHORT).format(p.getDueDate())
: "");
if (p.getCompany().getCcurrency().equalsIgnoreCase("USD")) {
form1.setField(
"cost",
(p.getProjectAmount() != null)
? "$ " + StandardCode.getInstance().formatDouble(p.getProjectAmount())
: "");
} else {
form1.setField(
"cost",
(p.getProjectAmount() != null)
? "€ "
+ StandardCode.getInstance()
.formatDouble(p.getProjectAmount() / p.getEuroToUsdExchangeRate())
: "");
}
// stamp.setFormFlattening(true);
stamp.close();
// write to client (web browser)
response.setHeader(
"Content-disposition",
"attachment; filename="
+ p.getNumber()
+ p.getCompany().getCompany_code()
+ "-Order-Confirmation"
+ ".pdf");
OutputStream os = response.getOutputStream();
pdfStream.writeTo(os);
os.flush();
} catch (Exception e) {
System.err.println("PDF Exception:" + e.getMessage());
throw new RuntimeException(e);
}
// END process pdf
// Forward control to the specified success URI
return (mapping.findForward("Success"));
}
// ## operation writeChemkinReactions(ReactionModel)
public static String writeChemkinPdepReactions(
ReactionModel p_reactionModel, SystemSnapshot p_beginStatus) {
// #[ operation writeChemkinReactions(ReactionModel)
StringBuilder result = new StringBuilder();
// result.append("REACTIONS KCAL/MOLE\n");
String reactionHeader = "";
String units4Ea = ArrheniusKinetics.getEaUnits();
if (units4Ea.equals("cal/mol")) reactionHeader = "CAL/MOL\t";
else if (units4Ea.equals("kcal/mol")) reactionHeader = "KCAL/MOL\t";
else if (units4Ea.equals("J/mol")) reactionHeader = "JOULES/MOL\t";
else if (units4Ea.equals("kJ/mol")) reactionHeader = "KJOULES/MOL\t";
else if (units4Ea.equals("Kelvins")) reactionHeader = "KELVINS\t";
String units4A = ArrheniusKinetics.getAUnits();
if (units4A.equals("moles")) reactionHeader += "MOLES\n";
else if (units4A.equals("molecules")) reactionHeader += "MOLECULES\n";
result.append("REACTIONS\t" + reactionHeader);
LinkedList pDepList = new LinkedList();
LinkedList nonPDepList = new LinkedList();
LinkedList duplicates = new LinkedList();
CoreEdgeReactionModel cerm = (CoreEdgeReactionModel) p_reactionModel;
// first get troe and thirdbodyreactions
for (Iterator iter = cerm.getReactionSet().iterator(); iter.hasNext(); ) {
Reaction r = (Reaction) iter.next();
/*
* 1Jul2009-MRH:
* Added extra set of parenthesis. Before, if the rxn was reverse but an instance of
* TROEReaction, it would also be added to the pDepList, resulting in RMG reporting
* both rxns (forward and reverse) in the chem.inp file, w/o a DUP tag. Furthermore,
* both rxns were given the same set of Arrhenius parameters. Running this in
* Chemkin-v4.1.1 resulted in an error.
*/
if (r.isForward()
&& (r instanceof ThirdBodyReaction
|| r instanceof TROEReaction
|| r instanceof LindemannReaction)) {
pDepList.add(r);
}
}
for (Iterator iter = PDepNetwork.getNetworks().iterator(); iter.hasNext(); ) {
PDepNetwork pdn = (PDepNetwork) iter.next();
for (ListIterator pdniter = pdn.getNetReactions().listIterator(); pdniter.hasNext(); ) {
PDepReaction rxn = (PDepReaction) pdniter.next();
if (cerm.categorizeReaction(rxn) != 1) continue;
// check if this reaction is not already in the list and also check if this reaction has a
// reverse reaction
// which is already present in the list.
if (rxn.getReverseReaction() == null) rxn.generateReverseReaction();
if (!rxn.reactantEqualsProduct()
&& !pDepList.contains(rxn)
&& !pDepList.contains(rxn.getReverseReaction())) {
pDepList.add(rxn);
}
}
}
LinkedList removeReactions = new LinkedList();
for (Iterator iter = p_reactionModel.getReactionSet().iterator(); iter.hasNext(); ) {
Reaction r = (Reaction) iter.next();
boolean presentInPDep = false;
if (r.isForward()
&& !(r instanceof ThirdBodyReaction)
&& !(r instanceof TROEReaction)
&& !(r instanceof LindemannReaction)) {
Iterator r_iter = pDepList.iterator();
while (r_iter.hasNext()) {
Reaction pDepr = (Reaction) r_iter.next();
if (pDepr.equals(r)) {
// removeReactions.add(pDepr);
// duplicates.add(pDepr);
// if (!r.hasAdditionalKinetics()){
// duplicates.add(r);
// presentInPDep = true;
// }
presentInPDep = true;
nonPDepList.add(r);
}
}
if (!presentInPDep) nonPDepList.add(r);
}
}
for (Iterator iter = removeReactions.iterator(); iter.hasNext(); ) {
Reaction r = (Reaction) iter.next();
pDepList.remove(r);
}
for (Iterator iter = pDepList.iterator(); iter.hasNext(); ) {
Reaction r = (Reaction) iter.next();
// 6Jul2009-MRH:
// Pass both system temperature and pressure to function toChemkinString.
// The only PDepKineticsModel that uses the passed pressure is RATE
result.append(
r.toChemkinString(p_beginStatus.getTemperature(), p_beginStatus.getPressure())
+ "\n"); // 10/26/07 gmagoon: eliminating use of Global.temperature; **** I use
// beginStatus here, which may or may not be appropriate
// result.append(r.toChemkinString(Global.temperature)+"\n");
}
for (Iterator iter = nonPDepList.iterator(); iter.hasNext(); ) {
Reaction r = (Reaction) iter.next();
result.append(
r.toChemkinString(p_beginStatus.getTemperature(), p_beginStatus.getPressure()) + "\n");
// result.append(r.toChemkinString(Global.temperature)+"\n");
}
for (Iterator iter = duplicates.iterator(); iter.hasNext(); ) {
Reaction r = (Reaction) iter.next();
result.append(
r.toChemkinString(p_beginStatus.getTemperature(), p_beginStatus.getPressure())
+ "\n\tDUP\n");
// result.append(r.toChemkinString(Global.temperature)+"\n\tDUP\n");
}
result.append("END\n");
return result.toString();
// #]
}