public void actionPerformed(ActionEvent e) {
// Interpreter.abort();//17.9.2010 -checks for null instance etc removed 11.8.2013
Editor ed = OJ.editor;
String theText = ed.getText();
theText = UtilsOJ.fixLineFeeds(theText); // 7.9.2010
OJ.getData().setLinkedMacroText(theText);
int caretPos = ed.getTextArea().getCaretPosition();
ed.getTextArea().setText(theText);
ed.getTextArea().setCaretPosition(caretPos);
doInstall(theText);
setEditorUnchanged(ed);
ij.IJ.getInstance().setVisible(true);
}
/** Used by open() and IJ.open() to open text URLs. */
void openTextURL(String url) {
if (url.endsWith(".pdf") || url.endsWith(".zip")) return;
String text = IJ.openUrlAsString(url);
if (text != null && text.startsWith("<Error: ")) {
IJ.error("Open Text URL", text);
return;
}
String name = url.substring(7);
int index = name.lastIndexOf("/");
int len = name.length();
if (index == len - 1) name = name.substring(0, len - 1);
else if (index != -1 && index < len - 1) name = name.substring(index + 1);
name = name.replaceAll("%20", " ");
Editor ed = new Editor();
ed.setSize(600, 300);
ed.create(name, text);
IJ.showStatus("");
}
public void run(String arg) {
Frame[] niframes = WindowManager.getNonImageWindows();
String[] titles = new String[niframes.length + 1];
for (int i = 0; i < niframes.length; i++) {
titles[i] = niframes[i].getTitle();
}
titles[niframes.length] = "Clipboard";
GenericDialog gd = new GenericDialog("Windows");
boolean importfile = false;
gd.addCheckbox("Import from file?", importfile);
gd.addChoice("Windows", titles, titles[0]);
boolean hasxvals = false;
gd.addCheckbox("X Vals Column?", hasxvals);
boolean multix = false;
gd.addCheckbox("Multi_X_Columns?", multix);
boolean skipendzeros = false;
gd.addCheckbox("Skip_end_zeros?", skipendzeros);
String[] delimiters = {"Tab", "Comma", "Space"};
gd.addChoice("Delimiter", delimiters, delimiters[0]);
gd.showDialog();
if (gd.wasCanceled()) {
return;
}
importfile = gd.getNextBoolean();
int index = gd.getNextChoiceIndex();
hasxvals = gd.getNextBoolean();
multix = gd.getNextBoolean();
skipendzeros = gd.getNextBoolean();
int delimindex = gd.getNextChoiceIndex();
if (multix) hasxvals = true;
String textdata = "";
if (importfile) {
OpenDialog od = new OpenDialog("Open File", "", ".txt");
String directory = od.getDirectory();
String name = od.getFileName();
if (name == null) {
return;
}
try {
File infile = new File(directory + name);
BufferedReader b = new BufferedReader(new FileReader(infile));
textdata = (new jdataio()).readstringfile(b);
b.close();
} catch (IOException e) {
return;
}
} else {
if (index == niframes.length) {
// here we get the data from the clipboard
Transferable t = Toolkit.getDefaultToolkit().getSystemClipboard().getContents(null);
try {
if (t != null && t.isDataFlavorSupported(DataFlavor.stringFlavor)) {
textdata = (String) t.getTransferData(DataFlavor.stringFlavor);
}
} catch (UnsupportedFlavorException e) {
} catch (IOException e) {
}
if (textdata.equals("")) {
IJ.error("Error copying from clipboard.");
return;
}
} else {
if (niframes[index] instanceof Editor) {
Editor tw = (Editor) niframes[index];
textdata = tw.getText();
} else {
if (niframes[index] instanceof TextWindow) {
TextWindow tw = (TextWindow) niframes[index];
textdata = tw.getTextPanel().getText();
} else {
IJ.showMessage("Not a valid text window");
return;
}
}
}
}
if (textdata == null) {
IJ.showMessage("Error in Obtaining String");
return;
}
if (textdata.indexOf("\r") >= 0) {
textdata = textdata.replace('\r', '\n');
}
char[] delims = {'\t', ',', ' '};
delimit_string ds = new delimit_string(delims[delimindex]);
String[] rows = ds.getrows(textdata);
int lines = rows.length;
int columns = ds.getnumcolumns(rows[0]);
int ycolumns = columns;
if (hasxvals) {
if (multix) {
ycolumns /= 2;
} else {
ycolumns--;
}
}
if (multix) {
float[][] ydata = new float[ycolumns][lines];
float[][] xdata = new float[ycolumns][lines];
for (int i = 0; i < lines; i++) {
float[] temp = ds.delim2float(rows[i], columns);
for (int j = 0; j < ycolumns; j++) {
ydata[j][i] = temp[2 * j + 1];
xdata[j][i] = temp[2 * j];
}
}
int[] npts = new int[ycolumns];
for (int i = 0; i < ycolumns; i++) {
npts[i] = lines;
}
if (skipendzeros) {
for (int i = 0; i < ycolumns; i++) {
int counter = lines - 1;
while ((xdata[i][counter] == 0.0f || Float.isNaN(xdata[i][counter])) && counter > 0) {
xdata[i][counter] = 0.0f;
ydata[i][counter] = 0.0f;
npts[i]--;
counter--;
}
}
}
(new PlotWindow4("Text Plot", "x", "y", xdata, ydata, npts)).draw();
} else {
float[][] tempydata = new float[ycolumns][lines];
float[] tempxdata = new float[lines];
float[][] xdata = null;
float[][] ydata = null;
int startcolumn = 0;
if (hasxvals) startcolumn = 1;
for (int i = 0; i < lines; i++) {
float[] temp = ds.delim2float(rows[i], columns);
if (hasxvals) {
tempxdata[i] = temp[0];
} else {
tempxdata[i] = (float) (i + 1);
}
for (int j = 0; j < ycolumns; j++) {
tempydata[j][i] = temp[j + startcolumn];
}
}
int[] npts = new int[ycolumns];
npts[0] = lines;
if (skipendzeros) {
int maxpts = 0;
for (int i = 0; i < ycolumns; i++) {
int counter = lines - 1;
npts[i] = lines;
while ((tempydata[i][counter] == 0.0f || Float.isNaN(tempydata[i][counter]))
&& counter > 0) {
npts[i]--;
counter--;
}
if (npts[i] > maxpts) maxpts = npts[i];
IJ.log("" + npts[i]);
}
ydata = new float[ycolumns][maxpts];
xdata = new float[ycolumns][maxpts];
for (int i = 0; i < ycolumns; i++) {
// npts[i]=npts[0];
System.arraycopy(tempxdata, 0, xdata[i], 0, npts[i]);
System.arraycopy(tempydata[i], 0, ydata[i], 0, npts[i]);
}
} else {
ydata = tempydata;
xdata = new float[ycolumns][];
for (int i = 0; i < ycolumns; i++) {
npts[i] = npts[0];
xdata[i] = tempxdata.clone();
}
}
(new PlotWindow4("Text Plot", "x", "y", xdata, ydata, npts)).draw();
}
}
public void showEmbeddedMacros(int modifier) {
showPopUp = ((modifier & KeyEvent.ALT_MASK) != 0);
String macros_text = OJ.getData().getLinkedMacroText();
if (macros_text == null) {
macros_text = "";
}
Window theWindow = OJ.editorWindow;
if (theWindow != null && theWindow.isShowing() && OJ.editor != null) {
theWindow.setVisible(true);
return;
}
String version = IJ.getFullVersion();
Editor ed;
if (version.compareToIgnoreCase("1.49i03") >= 0) {
ed = new EditorOJ(16, 60, 0, Editor.MONOSPACED + Editor.MENU_BAR);
} else {
ed = new Editor(16, 60, 0, Editor.MONOSPACED + Editor.MENU_BAR);
}
ed.create("Embedded Macros", macros_text);
JButton loadButton = new JButton("Install in ObjectJ menu");
loadButton.addActionListener(LoadEmbeddedMacroAction);
TextArea ta = ed.getTextArea();
ed.remove(ta);
ed.setLayout(new BorderLayout());
JPanel panel1 = new JPanel();
panel1.setLayout(new FlowLayout());
loadButton.setFont(new Font("SansSerif", Font.PLAIN, 14));
panel1.add(loadButton);
JLabel myLabel = new JLabel("Macros Overview");
if (showPopUp) {
panel1.add(myLabel);
}
myLabel.setForeground(Color.blue);
myLabel.setAutoscrolls(true);
macrosPopup = new javax.swing.JPopupMenu();
myLabel.addMouseListener(
new java.awt.event.MouseAdapter() {
public void mouseEntered(java.awt.event.MouseEvent evt) {
refreshPopupItems();
}
public void mouseReleased(java.awt.event.MouseEvent evt) {
if ((evt.getModifiers() & InputEvent.BUTTON1_MASK) != 0) {
ij.IJ.showStatus("Right-Click to navigate through macros");
// + "\n-"
// + "\nYou also can enter bookmark tags into the macro
// text:"
// + "\n //<< bookmarks left part of line"
// + "\n //>> bookmarks right part of line");
}
}
});
myLabel.setComponentPopupMenu(macrosPopup);
ed.add(BorderLayout.NORTH, panel1);
ed.add(BorderLayout.CENTER, ta);
Font monoFont = new Font("Monospaced", Font.PLAIN, 14);
ta.setFont(monoFont);
OJ.editor = ed;
Frame[] frames = WindowManager.getNonImageWindows();
Frame frame = frames[frames.length - 1];
// ij.IJ.log(WindowManager.getFrontWindow().getTitle());
// ij.IJ.log(frame.getTitle());//"Embedded Macros"
// ij.IJ.log("---");//"Embedded Macros"
OJ.editorWindow = WindowManager.getFrontWindow();
refreshPopupItems();
loadButton.transferFocus();
}
/**
* Opens and displays the specified tiff, dicom, fits, pgm, jpeg, bmp, gif, lut, roi, or text
* file. Displays an error message if the file is not in a supported format.
*
* @see ij.IJ#open(String)
* @see ij.IJ#openImage(String)
*/
public void open(String path) {
boolean isURL = path.indexOf("://") > 0;
if (isURL && isText(path)) {
openTextURL(path);
return;
}
if (path.endsWith(".jar") || path.endsWith(".class")) {
(new PluginInstaller()).install(path);
return;
}
boolean fullPath =
path.startsWith("/") || path.startsWith("\\") || path.indexOf(":\\") == 1 || isURL;
if (!fullPath) {
String defaultDir = OpenDialog.getDefaultDirectory();
if (defaultDir != null) path = defaultDir + path;
else path = (new File(path)).getAbsolutePath();
}
if (!silentMode) IJ.showStatus("Opening: " + path);
long start = System.currentTimeMillis();
ImagePlus imp = openImage(path);
if (imp == null && isURL) return;
if (imp != null) {
WindowManager.checkForDuplicateName = true;
if (isRGB48) openRGB48(imp);
else imp.show(getLoadRate(start, imp));
} else {
switch (fileType) {
case LUT:
imp = (ImagePlus) IJ.runPlugIn("ij.plugin.LutLoader", path);
if (imp.getWidth() != 0) imp.show();
break;
case ROI:
IJ.runPlugIn("ij.plugin.RoiReader", path);
break;
case JAVA_OR_TEXT:
case TEXT:
if (IJ.altKeyDown()) { // open in TextWindow if alt key down
new TextWindow(path, 400, 450);
IJ.setKeyUp(KeyEvent.VK_ALT);
break;
}
File file = new File(path);
int maxSize = 250000;
long size = file.length();
if (size >= 28000) {
String osName = System.getProperty("os.name");
if (osName.equals("Windows 95")
|| osName.equals("Windows 98")
|| osName.equals("Windows Me")) maxSize = 60000;
}
if (size < maxSize) {
Editor ed = (Editor) IJ.runPlugIn("ij.plugin.frame.Editor", "");
if (ed != null) ed.open(getDir(path), getName(path));
} else new TextWindow(path, 400, 450);
break;
case OJJ: // ObjectJ project
IJ.runPlugIn("ObjectJ_", path);
break;
case TABLE: // ImageJ Results table
openResultsTable(path);
break;
case RAW:
IJ.runPlugIn("ij.plugin.Raw", path);
break;
case UNKNOWN:
String msg =
"File is not in a supported format, a reader\n"
+ "plugin is not available, or it was not found.";
if (path != null) {
if (path.length() > 64) path = (new File(path)).getName();
if (path.length() <= 64) {
if (IJ.redirectingErrorMessages()) msg += " \n " + path;
else msg += " \n \n" + path;
}
}
if (openUsingPlugins) msg += "\n \nNOTE: The \"OpenUsingPlugins\" option is set.";
IJ.wait(IJ.isMacro() ? 500 : 100); // work around for OS X thread deadlock problem
IJ.error("Opener", msg);
error = true;
break;
}
}
}