@Override
public Composite createUI(Composite parent) {
this.display = WorkPart.display();
Shell shell = new Shell(this.display);
shell.setSize(50, 100);
GridLayout gridLayout = new GridLayout();
gridLayout.numColumns = 1;
shell.setLayout(gridLayout);
ProgressBar pb = new ProgressBar(shell, SWT.HORIZONTAL | SWT.INDETERMINATE);
pb.setLayoutData(new GridData(GridData.FILL_HORIZONTAL));
Label searching = new Label(shell, SWT.NONE);
searching.setText("Searching...");
shell.open();
this.isSearching = true;
new Thread() {
public void run() {
testTm_cz = RetrieveData.testTm_czConnection();
testTm_lz = RetrieveData.testTm_lzConnection();
testDeapp = RetrieveData.testDeappConnection();
root = new TreeNode("Dataset explorer", null, false);
studyTree = new StudyTree(root);
topNodeController = new TopNodeController(root, dataType, studyTree);
root = topNodeController.buildTree();
topNode = dataType.getStudy().getTopNode();
isSearching = false;
}
}.start();
this.display = WorkPart.display();
while (this.isSearching) {
if (!display.readAndDispatch()) {
display.sleep();
}
}
shell.close();
Composite composite = new Composite(parent, SWT.NONE);
GridLayout gd = new GridLayout();
gd.numColumns = 1;
gd.horizontalSpacing = 0;
gd.verticalSpacing = 0;
composite.setLayout(gd);
composite.setLayoutData(new GridData(GridData.FILL_BOTH));
ScrolledComposite scroller = new ScrolledComposite(composite, SWT.H_SCROLL | SWT.V_SCROLL);
scroller.setLayoutData(new GridData(GridData.FILL_BOTH));
gd = new GridLayout();
gd.numColumns = 1;
gd.horizontalSpacing = 0;
gd.verticalSpacing = 0;
scroller.setLayout(gd);
scroller.setLayoutData(new GridData(GridData.FILL_BOTH));
Composite scrolledComposite = new Composite(scroller, SWT.NONE);
scroller.setContent(scrolledComposite);
GridLayout layout = new GridLayout();
layout.numColumns = 1;
layout.verticalSpacing = 10;
scrolledComposite.setLayout(layout);
scrolledComposite.setLayoutData(new GridData(GridData.FILL_BOTH));
this.topNode = this.dataType.getStudy().getTopNode();
if (topNode != null && topNode.compareTo("") != 0) {
viewer = new TreeViewer(scrolledComposite, SWT.SINGLE | SWT.H_SCROLL | SWT.V_SCROLL);
viewer.setContentProvider(new StudyContentProvider());
viewer.setAutoExpandLevel(AbstractTreeViewer.ALL_LEVELS);
viewer.setInput(this.studyTree);
GridData gridData = new GridData(GridData.FILL_BOTH);
gridData.horizontalAlignment = SWT.FILL;
gridData.verticalAlignment = SWT.FILL;
gridData.grabExcessHorizontalSpace = true;
gridData.grabExcessVerticalSpace = true;
gridData.heightHint = 300;
gridData.widthHint = 250;
this.viewer.getControl().setLayoutData(gridData);
viewer.setLabelProvider(
new ColumnLabelProvider() {
@Override
public String getText(Object element) {
return element.toString();
}
@Override
public Color getBackground(Object element) {
if (((TreeNode) element).isStudyRoot()) {
return new Color(Display.getCurrent(), 237, 91, 67);
}
if (((TreeNode) element).isLabel()) {
return new Color(Display.getCurrent(), 212, 212, 212);
}
return null;
}
});
securityButton = new Button(scrolledComposite, SWT.CHECK);
securityButton.setText("Security required");
securityButton.addListener(
SWT.Selection,
new Listener() {
@Override
public void handleEvent(Event event) {
security = securityButton.getSelection();
}
});
/*indexesButton=new Button(scrolledComposite, SWT.CHECK);
indexesButton.setText("Turn off the indexes during loaded (only for large datasets)");
indexesButton.addListener(SWT.Selection, new Listener(){
@Override
public void handleEvent(Event event) {
indexes=indexesButton.getSelection();
}
})*/ ;
} else {
Label label = new Label(scrolledComposite, SWT.NONE);
label.setText("Please first choose a study node in the description data type");
}
Button button = new Button(scrolledComposite, SWT.PUSH);
button.setText("Load");
if (topNode != null && topNode.compareTo("") != 0) {
if (this.testTm_cz && this.testTm_lz && this.testDeapp) {
button.addListener(SWT.Selection, new LoadGeneExpressionDataListener(this, this.dataType));
Label dbLabel = new Label(scrolledComposite, SWT.NONE);
dbLabel.setText("You are connected to database '" + PreferencesHandler.getDb() + "'");
} else {
button.setEnabled(false);
Label warn = new Label(scrolledComposite, SWT.NONE);
warn.setText("Warning: connection to database is not possible");
}
} else {
button.setEnabled(false);
}
scrolledComposite.setSize(scrolledComposite.computeSize(SWT.DEFAULT, SWT.DEFAULT));
return composite;
}
