public void changeLAF(int iLAFIndex) { try { // Change LAF if (iLAFIndex >= marrLaf.length) iLAFIndex = marrLaf.length - 1; UIManager.setLookAndFeel( (LookAndFeel) Class.forName(marrLaf[iLAFIndex].getClassName()).newInstance()); // Update UI ((JMenuItem) mvtLAFItem.elementAt(iLAFIndex)).setSelected(true); SwingUtilities.updateComponentTreeUI(this); SwingUtilities.updateComponentTreeUI(mnuMain); WindowManager.updateLookAndField(); // Store config try { Hashtable prt = Global.loadHashtable(Global.FILE_CONFIG); prt.put("LAF", String.valueOf(iLAFIndex)); Global.storeHashtable(prt, Global.FILE_CONFIG); } catch (Exception e) { } } catch (Exception e) { e.printStackTrace(); MessageBox.showMessageDialog(this, e, Global.APP_NAME, MessageBox.ERROR_MESSAGE); } }
/** * Saves statistics for one particle in a results table. This is a method subclasses may want to * override. */ protected void saveResults(ImageStatistics stats, Roi roi) { analyzer.saveResults(stats, roi); if (recordStarts) { rt.addValue("XStart", stats.xstart); rt.addValue("YStart", stats.ystart); } if (addToManager) { if (roiManager == null) { if (Macro.getOptions() != null && Interpreter.isBatchMode()) roiManager = Interpreter.getBatchModeRoiManager(); if (roiManager == null) { Frame frame = WindowManager.getFrame("ROI Manager"); if (frame == null) IJ.run("ROI Manager..."); frame = WindowManager.getFrame("ROI Manager"); if (frame == null || !(frame instanceof RoiManager)) { addToManager = false; return; } roiManager = (RoiManager) frame; } if (resetCounter) roiManager.runCommand("reset"); } if (imp.getStackSize() > 1) roi.setPosition(imp.getCurrentSlice()); if (lineWidth != 1) roi.setStrokeWidth(lineWidth); roiManager.add(imp, roi, rt.getCounter()); } if (showResults) rt.addResults(); }
void addToRoiManager(ImagePlus imp) { if (IJ.macroRunning() && Interpreter.isBatchModeRoiManager()) IJ.error("run(\"Add to Manager\") may not work in batch mode macros"); Frame frame = WindowManager.getFrame("ROI Manager"); if (frame == null) IJ.run("ROI Manager..."); if (imp == null) return; Roi roi = imp.getRoi(); if (roi == null) return; frame = WindowManager.getFrame("ROI Manager"); if (frame == null || !(frame instanceof RoiManager)) IJ.error("ROI Manager not found"); RoiManager rm = (RoiManager) frame; boolean altDown = IJ.altKeyDown(); IJ.setKeyUp(IJ.ALL_KEYS); if (altDown && !IJ.macroRunning()) IJ.setKeyDown(KeyEvent.VK_SHIFT); if (roi.getState() == Roi.CONSTRUCTING) { // wait (up to 2 sec.) until ROI finished long start = System.currentTimeMillis(); while (true) { IJ.wait(10); if (roi.getState() != Roi.CONSTRUCTING) break; if ((System.currentTimeMillis() - start) > 2000) { IJ.beep(); IJ.error("Add to Manager", "Selection is not complete"); return; } } } rm.runCommand("add"); IJ.setKeyUp(IJ.ALL_KEYS); }
/** * Creates a new GenericDialog with the specified title. Uses the current image image window as * the parent frame or the ImageJ frame if no image windows are open. Dialog parameters are * recorded by ImageJ's command recorder but this requires that the first word of each label be * unique. */ public GenericDialog(String title) { this( title, WindowManager.getCurrentImage() != null ? (Frame) WindowManager.getCurrentImage().getWindow() : IJ.getInstance() != null ? IJ.getInstance() : new Frame()); }
public void run(String arg) { ImagePlus imp = WindowManager.getCurrentImage(); if (imp == null) { IJ.noImage(); return; } ImageStack stack1 = imp.getStack(); String fileName = imp.getTitle(); int endslice = stack1.getSize(); ImagePlus imp2 = duplicateStack(imp); imp2.show(); String duplicateName = imp2.getTitle(); // IJ.showMessage("Box",fileName); ImageStack stack2 = imp2.getStack(); stack1.deleteSlice(1); stack2.deleteSlice(endslice); String calculatorstring = ("image1='" + fileName + "' operation=Subtract image2=" + imp2.getTitle() + " create stack"); IJ.run("Image Calculator...", calculatorstring); ImagePlus imp3 = WindowManager.getCurrentImage(); imp3.setTitle(fileName + " DeltaF up"); imp2.getWindow().close(); imp.getWindow().close(); }
private String getWindowCloser() { String result = ""; boolean isActiveForm = false; WebForm[] allForms = FormManager.getAll(); // remove all closed windows except the active window for (int i = 0; i < allForms.length; i++) { WebForm form = allForms[i]; if (form != FormManager.getActive()) { IWindow window = W4TContext.getWindowManager().findWindow(form); if (window != null && WindowManager.isClosing(window)) { NoscriptFormStack.getInstance().remove(form); } } } // 'close' active window IWindow activeWindow = WindowManager.getActive(); if (WindowManager.isClosing(activeWindow) && !WindowManager.isClosed(activeWindow)) { isActiveForm = true; NoscriptFormStack.getInstance().remove(FormManager.getActive()); WindowManager.setClosed(activeWindow, true); } // create meta tag to redirect to previous form if (isActiveForm && !NoscriptFormStack.getInstance().isEmpty()) { WebForm newForm = NoscriptFormStack.getInstance().pop(); result = "<meta http-equiv=\"refresh\" content=\"0; url=" + RenderUtil.createEncodedFormGetURL(newForm) + "\">"; } return result; }
/** * Update the visibility of the CASA window group * * @param preferredId */ public static void updateGroupVisibility(String preferredId) { WindowManager wm = WindowManager.getDefault(); TopComponentGroup group = wm.findTopComponentGroup("casa_ui"); // NOI18N if (group == null) { return; // group not found (should not happen) } // boolean isDesignViewSelected = false; for (Mode mode : wm.getModes()) { TopComponent selected = mode.getSelectedTopComponent(); if (selected != null) { MultiViewHandler mvh = MultiViews.findMultiViewHandler(selected); if (mvh != null) { MultiViewPerspective mvp = mvh.getSelectedPerspective(); if (mvp != null) { String id = mvp.preferredID(); if (preferredId.equals(id)) { isDesignViewSelected = true; break; } } } } } synchronized (groupVisible) { if (isDesignViewSelected && !groupVisible) { group.open(); groupVisible = Boolean.TRUE; } else if (!isDesignViewSelected && groupVisible) { group.close(); groupVisible = Boolean.FALSE; } } }
private void initWidthAndHeight(Context context) { WindowManager windowManager = (WindowManager) context.getSystemService(Context.WINDOW_SERVICE); Display display = windowManager.getDefaultDisplay(); Point point = new Point(); display.getSize(point); width = point.x; height = point.y; }
/** * Construct a CommandHandler instance * * @param commands */ public CommandHandler(ArrayList<Command> commands) { WindowManager.getDebugWindow().printInfo("Registering commands"); for (Command c : commands) { registerCommand(c); } WindowManager.getDebugWindow().printInfo(commands.size() + " commands registered"); }
public void run(String arg) { int[] wList = WindowManager.getIDList(); if (wList == null) { IJ.error("No images are open."); return; } double thalf = 0.5; boolean keep; GenericDialog gd = new GenericDialog("Bleach correction"); gd.addNumericField("t½:", thalf, 1); gd.addCheckbox("Keep source stack:", true); gd.showDialog(); if (gd.wasCanceled()) return; long start = System.currentTimeMillis(); thalf = gd.getNextNumber(); keep = gd.getNextBoolean(); if (keep) IJ.run("Duplicate...", "title='Bleach corrected' duplicate"); ImagePlus imp1 = WindowManager.getCurrentImage(); int d1 = imp1.getStackSize(); double v1, v2; int width = imp1.getWidth(); int height = imp1.getHeight(); ImageProcessor ip1, ip2, ip3; int slices = imp1.getStackSize(); ImageStack stack1 = imp1.getStack(); ImageStack stack2 = imp1.getStack(); int currentSlice = imp1.getCurrentSlice(); for (int n = 1; n <= slices; n++) { ip1 = stack1.getProcessor(n); ip3 = stack1.getProcessor(1); ip2 = stack2.getProcessor(n); for (int x = 0; x < width; x++) { for (int y = 0; y < height; y++) { v1 = ip1.getPixelValue(x, y); v2 = ip3.getPixelValue(x, y); // =B8/(EXP(-C$7*A8)) v1 = (v1 / Math.exp(-n * thalf)); ip2.putPixelValue(x, y, v1); } } IJ.showProgress((double) n / slices); IJ.showStatus(n + "/" + slices); } // stack2.show(); imp1.updateAndDraw(); }
private static Frame getParentFrame() { Frame parent = WindowManager.getCurrentImage() != null ? (Frame) WindowManager.getCurrentImage().getWindow() : IJ.getInstance() != null ? IJ.getInstance() : new Frame(); if (IJ.isMacOSX() && IJ.isJava18()) { ImageJ ij = IJ.getInstance(); if (ij != null && ij.isActive()) parent = ij; else parent = null; } return parent; }
@Override public void onComponentEvent(ComponentEvent ce) { super.onComponentEvent(ce); if (ce.getEventTypeInt() == Event.ONMOUSEDOWN) { // dont bring to front on clicks where active is model as active window // may have just been opened from this click event Window active = manager.getActive(); if (active != null && active != this && !active.isModal()) { manager.bringToFront(this); } } }
/** * Send a message to an Object. * * @param engine The engine. * @param msg The message that is sent. * @param ob The object receiving the message. * @return The result of the message being sent. */ public String sendMessageToObject(Engine engine, String msg, OObject ob) { if (msg.equalsIgnoreCase(UIKeyword.WINDOW_OPEN)) { this.run(engine, ob); } else if (msg.equalsIgnoreCase(UIKeyword.WINDOW_CLOSE)) { String title = this.getTitle(ob); OWindow w = WindowManager.getInstance().get(title); w.dispatchEvent(new WindowEvent(w, WindowEvent.WINDOW_CLOSING)); WindowManager.getInstance().removeWindow(title); } return ""; }
/** Quit using a separate thread, hopefully avoiding thread deadlocks. */ public void run() { quitting = true; boolean changes = false; int[] wList = WindowManager.getIDList(); if (wList != null) { for (int i = 0; i < wList.length; i++) { ImagePlus imp = WindowManager.getImage(wList[i]); if (imp != null && imp.changes == true) { changes = true; break; } } } Frame[] frames = WindowManager.getNonImageWindows(); if (frames != null) { for (int i = 0; i < frames.length; i++) { if (frames[i] != null && (frames[i] instanceof Editor)) { if (((Editor) frames[i]).fileChanged()) { changes = true; break; } } } } if (windowClosed && !changes && Menus.window.getItemCount() > Menus.WINDOW_MENU_ITEMS && !(IJ.macroRunning() && WindowManager.getImageCount() == 0)) { GenericDialog gd = new GenericDialog("ImageJ", this); gd.addMessage("Are you sure you want to quit ImageJ?"); gd.showDialog(); quitting = !gd.wasCanceled(); windowClosed = false; } if (!quitting) return; if (!WindowManager.closeAllWindows()) { quitting = false; return; } // IJ.log("savePreferences"); if (applet == null) { saveWindowLocations(); Prefs.savePreferences(); } IJ.cleanup(); // setVisible(false); // IJ.log("dispose"); dispose(); if (exitWhenQuitting) System.exit(0); }
public void run(String arg) { imp = WindowManager.getCurrentImage(); if (arg.equals("add")) { addToRoiManager(imp); return; } if (imp == null) { IJ.noImage(); return; } if (arg.equals("all")) imp.setRoi(0, 0, imp.getWidth(), imp.getHeight()); else if (arg.equals("none")) imp.killRoi(); else if (arg.equals("restore")) imp.restoreRoi(); else if (arg.equals("spline")) fitSpline(); else if (arg.equals("circle")) fitCircle(imp); else if (arg.equals("ellipse")) createEllipse(imp); else if (arg.equals("hull")) convexHull(imp); else if (arg.equals("mask")) createMask(imp); else if (arg.equals("from")) createSelectionFromMask(imp); else if (arg.equals("inverse")) invert(imp); else if (arg.equals("toarea")) lineToArea(imp); else if (arg.equals("toline")) areaToLine(imp); else if (arg.equals("properties")) { setProperties("Properties ", imp.getRoi()); imp.draw(); } else if (arg.equals("band")) makeBand(imp); else if (arg.equals("tobox")) toBoundingBox(imp); else runMacro(arg); }
public String[] getOpenImageNames() { int[] imageIDList = WindowManager.getIDList(); String[] imageNames = new String[imageIDList.length]; // imageNames[0] = "None"; if (!imageIDList.equals(null) && imageIDList.length > 1) { for (int i = 0; i < imageIDList.length; i++) { ImagePlus tempIMP = WindowManager.getImage(imageIDList[i]); imageNames[i] = tempIMP.getTitle(); } return imageNames; } else { imageNames[0] = "None"; return imageNames; } }
public void changeDictionary(String strLanguage) { // Change dictionary MonitorDictionary.setCurrentLanguage(strLanguage); DefaultDictionary.setCurrentLanguage(strLanguage); ErrorDictionary.setCurrentLanguage(strLanguage); // Update UI updateLanguage(); WindowManager.updateLanguage(); int iIndex = mvtLanguage.indexOf(strLanguage); if (iIndex >= 0) { JRadioButtonMenuItem mnu = (JRadioButtonMenuItem) mvtLanguageItem.elementAt(iIndex); mnu.setSelected(true); } // Store config Hashtable prt = null; try { prt = Global.loadHashtable(Global.FILE_CONFIG); } catch (Exception e) { prt = new Hashtable(); } prt.put("Language", strLanguage); try { Global.storeHashtable(prt, Global.FILE_CONFIG); } catch (Exception e) { } }
void remove() { ImagePlus imp = WindowManager.getCurrentImage(); if (imp != null) imp.setOverlay(null); overlay2 = null; RoiManager rm = RoiManager.getInstance(); if (rm != null) rm.runCommand("show none"); }
/** Handles CheckboxMenuItem state changes. */ public void itemStateChanged(ItemEvent e) { MenuItem item = (MenuItem) e.getSource(); MenuComponent parent = (MenuComponent) item.getParent(); String cmd = e.getItem().toString(); if ((Menu) parent == Menus.window) WindowManager.activateWindow(cmd, item); else doCommand(cmd); }
public void showLikeQuickAction(int xOffset, int yOffset) { preShow(); window.setAnimationStyle(R.style.Animations_PopUpMenu_Center); int[] location = new int[2]; anchor.getLocationOnScreen(location); Rect anchorRect = new Rect( location[0], location[1], location[0] + anchor.getWidth(), location[1] + anchor.getHeight()); root.setLayoutParams( new ViewGroup.LayoutParams( ViewGroup.LayoutParams.WRAP_CONTENT, ViewGroup.LayoutParams.WRAP_CONTENT)); root.measure(ViewGroup.LayoutParams.WRAP_CONTENT, ViewGroup.LayoutParams.WRAP_CONTENT); int rootWidth = root.getMeasuredWidth(); int rootHeight = root.getMeasuredHeight(); int screenWidth = windowManager.getDefaultDisplay().getWidth(); int xPos = ((screenWidth - rootWidth) / 2) + xOffset; int yPos = anchorRect.top - rootHeight + yOffset; // display on bottom if (rootHeight > anchorRect.top) { yPos = anchorRect.bottom + yOffset; window.setAnimationStyle(R.style.Animations_PopDownMenu_Center); } window.showAtLocation(anchor, Gravity.NO_GRAVITY, xPos, yPos); }
void createMask(ImagePlus imp) { Roi roi = imp.getRoi(); boolean useInvertingLut = Prefs.useInvertingLut; Prefs.useInvertingLut = false; if (roi == null || !(roi.isArea() || roi.getType() == Roi.POINT)) { createMaskFromThreshold(imp); Prefs.useInvertingLut = useInvertingLut; return; } ImagePlus maskImp = null; Frame frame = WindowManager.getFrame("Mask"); if (frame != null && (frame instanceof ImageWindow)) maskImp = ((ImageWindow) frame).getImagePlus(); if (maskImp == null) { ImageProcessor ip = new ByteProcessor(imp.getWidth(), imp.getHeight()); if (!Prefs.blackBackground) ip.invertLut(); maskImp = new ImagePlus("Mask", ip); maskImp.show(); } ImageProcessor ip = maskImp.getProcessor(); ip.setRoi(roi); ip.setValue(255); ip.fill(ip.getMask()); maskImp.updateAndDraw(); Prefs.useInvertingLut = useInvertingLut; }
public Zipper<Map<Integer, MZipper<RoiContainer>>> exec( Zipper<Map<Integer, MZipper<RoiContainer>>> z, int frame) { JFileChooser fc = new JFileChooser(); int returnVal = fc.showOpenDialog(WindowManager.getCurrentWindow().getCanvas()); Map<Integer, MZipper<RoiContainer>> newRois; if (returnVal == JFileChooser.APPROVE_OPTION) { try { FileInputStream f = new FileInputStream(fc.getSelectedFile().getCanonicalPath()); MroiLisp parser = new MroiLisp(f); parser.ReInit(f); newRois = parser.roiFile(); // z.rights.clear(); // z.rights.add(newRois); // z = z.right(); // return z; return z.insertAndStep(newRois); } catch (IOException e) { IJ.error("Couldn't open from " + fc.getSelectedFile().getName() + ": " + e.getMessage()); } catch (mroi.ParseException e) { IJ.error("Failed in parsing: " + e.getMessage()); } catch (Exception e) { IJ.error("Malformed input file: " + e.getMessage()); } } return z; }
void updateSliceSummary() { int slices = imp.getStackSize(); float[] areas = rt.getColumn(ResultsTable.AREA); if (areas == null) areas = new float[0]; String label = imp.getTitle(); if (slices > 1) { label = imp.getStack().getShortSliceLabel(slice); label = label != null && !label.equals("") ? label : "" + slice; } String aLine = null; double sum = 0.0; int start = areas.length - particleCount; if (start < 0) return; for (int i = start; i < areas.length; i++) sum += areas[i]; int places = Analyzer.getPrecision(); Calibration cal = imp.getCalibration(); String total = "\t" + ResultsTable.d2s(sum, places); String average = "\t" + ResultsTable.d2s(sum / particleCount, places); String fraction = "\t" + ResultsTable.d2s(sum * 100.0 / totalArea, 1); aLine = label + "\t" + particleCount + total + average + fraction; aLine = addMeans(aLine, areas.length > 0 ? start : -1); if (slices == 1) { Frame frame = WindowManager.getFrame("Summary"); if (frame != null && (frame instanceof TextWindow) && summaryHdr.equals(prevHdr)) tw = (TextWindow) frame; } if (tw == null) { String title = slices == 1 ? "Summary" : "Summary of " + imp.getTitle(); tw = new TextWindow(title, summaryHdr, aLine, 450, 300); prevHdr = summaryHdr; } else tw.append(aLine); }
public Channels() { super("Channels"); if (instance != null) { instance.toFront(); return; } WindowManager.addWindow(this); instance = this; GridBagLayout gridbag = new GridBagLayout(); GridBagConstraints c = new GridBagConstraints(); setLayout(gridbag); int y = 0; c.gridx = 0; c.gridy = y++; c.gridwidth = 1; c.fill = GridBagConstraints.BOTH; c.anchor = GridBagConstraints.CENTER; int margin = 32; if (IJ.isMacOSX()) margin = 20; c.insets = new Insets(10, margin, 10, margin); choice = new Choice(); for (int i = 0; i < modes.length; i++) choice.addItem(modes[i]); choice.select(0); choice.addItemListener(this); add(choice, c); CompositeImage ci = getImage(); int nCheckBoxes = ci != null ? ci.getNChannels() : 3; if (nCheckBoxes > CompositeImage.MAX_CHANNELS) nCheckBoxes = CompositeImage.MAX_CHANNELS; checkbox = new Checkbox[nCheckBoxes]; for (int i = 0; i < nCheckBoxes; i++) { checkbox[i] = new Checkbox("Channel " + (i + 1), true); c.insets = new Insets(0, 25, i < nCheckBoxes - 1 ? 0 : 10, 5); c.gridy = y++; add(checkbox[i], c); checkbox[i].addItemListener(this); } c.insets = new Insets(0, 15, 10, 15); c.fill = GridBagConstraints.NONE; c.gridy = y++; moreButton = new Button(moreLabel); moreButton.addActionListener(this); add(moreButton, c); update(); pm = new PopupMenu(); for (int i = 0; i < menuItems.length; i++) addPopupItem(menuItems[i]); add(pm); addKeyListener(IJ.getInstance()); // ImageJ handles keyboard shortcuts setResizable(false); pack(); if (location == null) { GUI.center(this); location = getLocation(); } else setLocation(location); show(); }
/** * Adds a checkbox labelled "Preview" for "automatic" preview. The reference to this checkbox can * be retrieved by getPreviewCheckbox() and it provides the additional method previewRunning for * optical feedback while preview is prepared. PlugInFilters can have their "run" method * automatically called for preview under the following conditions: - the PlugInFilter must pass a * reference to itself (i.e., "this") as an argument to the AddPreviewCheckbox - it must implement * the DialogListener interface and set the filter parameters in the dialogItemChanged method. - * it must have DIALOG and PREVIEW set in its flags. A previewCheckbox is always off when the * filter is started and does not get recorded by the Macro Recorder. * * @param pfr A reference to the PlugInFilterRunner calling the PlugInFilter if automatic preview * is desired, null otherwise. */ public void addPreviewCheckbox(PlugInFilterRunner pfr) { if (previewCheckbox != null) return; ImagePlus imp = WindowManager.getCurrentImage(); if (imp != null && imp.isComposite() && ((CompositeImage) imp).getMode() == IJ.COMPOSITE) return; this.pfr = pfr; addCheckbox(previewLabel, false, true); }
void addToRoiManager(ImagePlus imp) { if (IJ.macroRunning() && Interpreter.isBatchModeRoiManager()) IJ.error("run(\"Add to Manager\") may not work in batch mode macros"); Frame frame = WindowManager.getFrame("ROI Manager"); if (frame == null) IJ.run("ROI Manager..."); if (imp == null) return; Roi roi = imp.getRoi(); if (roi == null) return; frame = WindowManager.getFrame("ROI Manager"); if (frame == null || !(frame instanceof RoiManager)) IJ.error("ROI Manager not found"); RoiManager rm = (RoiManager) frame; boolean altDown = IJ.altKeyDown(); IJ.setKeyUp(IJ.ALL_KEYS); if (altDown && !IJ.macroRunning()) IJ.setKeyDown(KeyEvent.VK_SHIFT); rm.runCommand("add"); IJ.setKeyUp(IJ.ALL_KEYS); }
public void changePassword() { try { DialogChangePassword dlgPass = new DialogChangePassword(this, channel); if (dlgPass != null) WindowManager.centeredWindow(dlgPass); } catch (Exception e) { e.printStackTrace(); MessageBox.showMessageDialog(this, e, Global.APP_NAME, MessageBox.ERROR_MESSAGE); } }
public static boolean hasBackgroundProcesses(@NotNull Project project) { final IdeFrame frame = ((WindowManagerEx) WindowManager.getInstance()).findFrameFor(project); final StatusBarEx statusBar = frame == null ? null : (StatusBarEx) frame.getStatusBar(); if (statusBar != null) { final List<Pair<TaskInfo, ProgressIndicator>> processes = statusBar.getBackgroundProcesses(); if (!processes.isEmpty()) return true; } return false; }
public void showInFocusCenter() { final Component focused = getWndManager().getFocusedComponent(myProject); if (focused != null) { showInCenterOf(focused); } else { final JFrame frame = WindowManager.getInstance().getFrame(myProject); showInCenterOf(frame.getRootPane()); } }
public boolean isFocused() { IdeFocusManager fm = IdeFocusManager.getInstance(myProject); Component component = fm.getFocusedDescendantFor(myToolWindow.getComponent()); if (component != null) return true; Component owner = fm.getLastFocusedFor(WindowManager.getInstance().getIdeFrame(myProject)); return owner != null && SwingUtilities.isDescendingFrom(owner, myToolWindow.getComponent()); }