/** Test if the file type can be "tiled". */
private static void validateIsTilable(String typeString) {
boolean affective =
PreferenceManager.getInstance().getAsBoolean(PreferenceManager.AFFECTIVE_ENABLE);
if (!(typeString.endsWith("cn")
|| typeString.endsWith("igv")
|| typeString.endsWith("wig")
||
// ifile.toLowerCase().endsWith("cpg.txt") ||
typeString.endsWith("ewig")
|| typeString.endsWith("cn")
|| typeString.endsWith("snp")
|| typeString.endsWith("xcn")
|| typeString.endsWith("gct")
|| typeString.endsWith("tab")
|| typeString.endsWith("mage-tab")
|| typeString.endsWith("bedgraph")
|| Preprocessor.isAlignmentFile(typeString)
|| affective)) {
throw new PreprocessingException(
"Tile command not supported for files of type: " + typeString);
}
}
