- align - FM-index based Aligner
- lens - Data format reader (FASTA,FASTQ,BED,WIG,GFF,SAM/BAM,etc.)
$ make install
Default installation folder is $HOME/local/bin/genome-weaver
$ JVM_OPT="-Xmx=32g" genome-weaver bwt hg19.fa
$ genome-weaver align -r hg19.fa (fastq file) > (sam file)
(soon)
$ git confgi core.eol lf
$ git config core.autocrlf input