Most Popular Java Classes And Methods

1409601. TangentNormalizer (1)
1409602. AFCalculatorImplementation (1)
1409603. ReadThreadingGraph (1)
1409604. ReadClipper (1)
1409605. SmallBamWriter (1)
1 fields
1409606. Haplotype (1)
1409607. PoN (1)
1409608. ParamUtils (1)
1409609. ArtificialReadUtils (1)
1409610. ArtificialSAMUtils (1)
1409611. GATKRead (1)
1409612. PriorityQueue (1)
1409613. ReadUtils (1)
1 fields
1409614. Set (1)
1409615. StandardCovariateList (1)
1409616. RecalibrationTables (1)
1409617. ExomeToolsTestUtils (1)
1409618. BaseUtils (1)
1409619. GenomeLoc (1)
2 fields
1409620. MathUtils (1)
1409621. SimpleInterval (1)
4 fields
1409622. Utils (1)
2 fields
1409623. PairHMM (1)
1409624. ArrayList (1)
1409625. Collection (1)
3 fields
1409626. GenomeAnalysisEngine (1)
1409627. HashMap (1)
1 fields
1409628. LinkedHashMap (1)
1409629. List (1)
1409630. Map (1)
1409631. Math (1)
1409632. NewEvaluationContext (1)
1409633. RodBinding (1)
1 fields
1409634. Set (1)
5 fields
1409635. StringBuffer (1)
1409636. TreeSet (1)
1409637. VCFUtils (1)
1409638. VariantContext (1)
1409639. VariantEvalUtils (1)
1409640. AlignmentContext (1)
6 fields
1409641. AlignmentContextUtils (1)
1409642. ReferenceContext (1)
3 fields
1409643. LinkedHashSet (1)
1409644. LinkedList (1)
1409645. LocusShardDataProvider (1)
1409646. List (1)
1409647. SAMDataSource (1)
1409648. ReferenceOrderedDataSource (1)
1409649. VariantContextWriterStub (1)
1409650. PushbackIterator (1)
1409651. GATKFeature (1)
1409652. RODRecordList (1)
1409653. RefMetaDataTracker (1)
1 fields
1409654. GATKReport (1)
3 fields
1409655. GATKReportTable (1)
3 fields
1409656. List (1)
1409657. SAMDataSource (1)
1409658. AFCalcResult (1)
1 fields
1409659. VariantEvaluator (1)
1 fields
1409660. StratificationManager (1)
1409661. VariantStratifier (1)
2 fields
1409662. Collection (1)
1409663. EvaluationContext (1)
1409664. HashMap (1)
1409665. NewEvaluationContext (1)
1409666. VariantEvalUtils (1)
1 fields
1409667. VQSRCalibrationCurve (1)
1409668. ActiveRegionWalker (1)
1409669. Collection (1)
1 fields
1409670. List (1)
1409671. LocusWalker (1)
1409672. SAMDataSource (1)
1409673. Set (1)
1409674. Walker (1)
1409675. GenomeAnalysisEngine (1)
4 fields
1409676. ActiveRegion (1)
1409677. ArrayList (1)
1409678. Collection (1)
1409679. LinkedHashMap (1)
1409680. List (1)
1409681. Math (1)
1409682. RodBinding (1)
1 fields
1409683. Set (1)
1 fields
1409684. StringBuffer (1)
1409685. VCFUtils (1)
1 fields
1409686. VariantContext (1)
1409687. ExpandingArrayList (1)
1409688. ExtendedEventPileupElement (1)
4 fields
1409689. PileupElement (1)
5 fields
1409690. ReadBackedExtendedEventPileup (1)
1 fields
1409691. ReadBackedPileup (1)
1 fields
1409692. ReadGroupCovariate (1)
1409693. ArtificialSAMUtils (1)
1 fields
1409694. GATKSAMReadGroupRecord (1)
1409695. GATKSAMRecord (1)
6 fields
1409696. List (1)
1409697. ReadUtils (1)
1 fields
1409698. SAMDataSource (1)
1409699. TextFormattingUtils (1)
1409700. AFCalcResult (1)