@Override
public List<DataElementOperand> validateRequiredComments(
DataSet dataSet,
Period period,
OrganisationUnit organisationUnit,
DataElementCategoryOptionCombo attributeOptionCombo) {
List<DataElementOperand> violations = new ArrayList<>();
if (dataSet.isNoValueRequiresComment()) {
for (DataElement de : dataSet.getDataElements()) {
for (DataElementCategoryOptionCombo co : de.getCategoryCombo().getOptionCombos()) {
DataValue dv =
dataValueService.getDataValue(de, period, organisationUnit, co, attributeOptionCombo);
boolean missingValue = dv == null || StringUtils.trimToNull(dv.getValue()) == null;
boolean missingComment = dv == null || StringUtils.trimToNull(dv.getComment()) == null;
if (missingValue && missingComment) {
violations.add(new DataElementOperand(de, co));
}
}
}
}
return violations;
}
@Test
public void testAverageIntDataElement() {
DataElement dataElement = createDataElement('A', categoryCombo);
dataElement.setType(DataElement.VALUE_TYPE_INT);
dataElement.setAggregationOperator(DataElement.AGGREGATION_OPERATOR_AVERAGE_SUM);
dataElementIds.add(dataElementService.addDataElement(dataElement));
DataSet dataSet = createDataSet('A', new YearlyPeriodType());
dataSet.getDataElements().add(dataElement);
dataSetService.addDataSet(dataSet);
dataElement.getDataSets().add(dataSet);
dataElementService.updateDataElement(dataElement);
Period dataPeriod =
createPeriod(new YearlyPeriodType(), getDate(2000, 1, 1), getDate(2000, 12, 31));
OrganisationUnit unit = createOrganisationUnit('A');
organisationUnitIds.add(organisationUnitService.addOrganisationUnit(unit));
dataValueService.addDataValue(
createDataValue(dataElement, dataPeriod, unit, "100", categoryOptionCombo));
Period periodA =
createPeriod(new MonthlyPeriodType(), getDate(2000, 3, 1), getDate(2000, 3, 31));
Period periodB =
createPeriod(new MonthlyPeriodType(), getDate(2000, 4, 1), getDate(2000, 4, 30));
Period periodC =
createPeriod(new QuarterlyPeriodType(), getDate(2000, 3, 1), getDate(2000, 5, 31));
periodIds.add(periodService.addPeriod(periodA));
periodIds.add(periodService.addPeriod(periodB));
periodIds.add(periodService.addPeriod(periodC));
dataMartEngine.export(dataElementIds, indicatorIds, periodIds, organisationUnitIds);
assertEquals(
100.0,
aggregatedDataValueService.getAggregatedValue(
dataElement, categoryOptionCombo, periodA, unit),
DELTA);
assertEquals(
100.0,
aggregatedDataValueService.getAggregatedValue(
dataElement, categoryOptionCombo, periodB, unit),
DELTA);
assertEquals(
100.0,
aggregatedDataValueService.getAggregatedValue(
dataElement, categoryOptionCombo, periodC, unit),
DELTA);
}
public DataElement getDataElement(org.hisp.dhis.dataelement.DataElement dataElement) {
DataElement de = new DataElement();
de.setId(dataElement.getId());
de.setName(dataElement.getFormNameFallback());
de.setType(dataElement.getType());
de.setCategoryOptionCombos(getCategoryOptionCombos(dataElement));
// Limit the optionset transfer to the client
if (dataElement.getOptionSet() != null
&& dataElement.getOptionSet().getOptions().size() <= 50) {
de.setOptionSet(getOptionSet(dataElement));
}
return de;
}
public String execute() {
dataElementList =
new ArrayList<DataElement>(
programStageDataElementService.getListDataElement(
programStageService.getProgramStage(psId)));
if (dataElementList != null && !dataElementList.isEmpty()) {
Iterator<DataElement> deIterator = dataElementList.iterator();
while (deIterator.hasNext()) {
DataElement de = deIterator.next();
if (!de.getType().equals(DataElement.VALUE_TYPE_INT)) {
deIterator.remove();
}
}
}
return SUCCESS;
}
public OptionSet getOptionSet(org.hisp.dhis.dataelement.DataElement dataElement) {
org.hisp.dhis.option.OptionSet dhisOptionSet = dataElement.getOptionSet();
OptionSet mobileOptionSet = new OptionSet();
if (dhisOptionSet != null) {
mobileOptionSet.setId(dhisOptionSet.getId());
mobileOptionSet.setName(dhisOptionSet.getName());
mobileOptionSet.setOptions(dhisOptionSet.getOptions());
} else {
return null;
}
return mobileOptionSet;
}
public ModelList getCategoryOptionCombos(org.hisp.dhis.dataelement.DataElement dataElement) {
DataElementCategoryCombo categoryCombo = dataElement.getCategoryCombo();
// Client DataElement
ModelList deCateOptCombo = new ModelList();
List<Model> listCateOptCombo = new ArrayList<Model>();
deCateOptCombo.setModels(listCateOptCombo);
for (DataElementCategoryOptionCombo oneCatOptCombo : categoryCombo.getSortedOptionCombos()) {
Model oneCateOptCombo = new Model();
oneCateOptCombo.setId(oneCatOptCombo.getId());
oneCateOptCombo.setName(oneCatOptCombo.getName());
listCateOptCombo.add(oneCateOptCombo);
}
return deCateOptCombo;
}
@Test
public void averageIntDataElement() {
dataElementA.setAggregationOperator(DataElement.AGGREGATION_OPERATOR_AVERAGE);
dataElementService.updateDataElement(dataElementA);
assertEquals(
90.0,
aggregationService.getAggregatedDataValue(
dataElementA, categoryOptionComboA, mar01, mar31, unitC),
DELTA);
assertEquals(
105.0,
aggregationService.getAggregatedDataValue(
dataElementA, categoryOptionComboA, mar01, mar31, unitF),
DELTA);
assertEquals(
150.0,
aggregationService.getAggregatedDataValue(
dataElementA, categoryOptionComboA, mar01, mar31, unitB),
DELTA);
assertEquals(
85.2,
aggregationService.getAggregatedDataValue(
dataElementA, categoryOptionComboA, mar01, may31, unitC),
0.3);
assertEquals(
115.3,
aggregationService.getAggregatedDataValue(
dataElementA, categoryOptionComboA, mar01, may31, unitF),
0.3);
assertEquals(
193.3,
aggregationService.getAggregatedDataValue(
dataElementA, categoryOptionComboA, mar01, may31, unitB),
0.6);
}
@Test
public void averageBoolDataElement() {
dataElementB.setAggregationOperator(DataElement.AGGREGATION_OPERATOR_AVERAGE);
dataElementService.updateDataElement(dataElementB);
assertEquals(
1.0,
aggregationService.getAggregatedDataValue(
dataElementB, categoryOptionComboA, mar01, mar31, unitC),
DELTA);
assertEquals(
0.67,
aggregationService.getAggregatedDataValue(
dataElementB, categoryOptionComboA, mar01, mar31, unitF),
DELTA);
assertEquals(
0.6,
aggregationService.getAggregatedDataValue(
dataElementB, categoryOptionComboA, mar01, mar31, unitB),
DELTA);
assertEquals(
0.66,
aggregationService.getAggregatedDataValue(
dataElementB, categoryOptionComboA, mar01, may31, unitC),
DELTA);
assertEquals(
0.78,
aggregationService.getAggregatedDataValue(
dataElementB, categoryOptionComboA, mar01, may31, unitF),
DELTA);
assertEquals(
0.67,
aggregationService.getAggregatedDataValue(
dataElementB, categoryOptionComboA, mar01, may31, unitB),
DELTA);
}
@Override
public String execute() {
if (dataElementGroupId > 0) {
DataElementGroup group =
dataElementService.getDataElementGroup(dataElementGroupId.intValue());
dataElements = new ArrayList<>(group.getMembers());
} else {
dataElements = new ArrayList<>(dataElementService.getAllDataElements());
}
Collections.sort(dataElements, new IdentifiableObjectNameComparator());
for (DataElement dataElement : dataElements) {
DataElementCategoryCombo categoryCombo = dataElement.getCategoryCombo();
Set<DataElementCategoryOptionCombo> optionCombos = categoryCombo.getOptionCombos();
if (optionCombos.size() > 1) {
for (DataElementCategoryOptionCombo optionCombo : optionCombos) {
DataElementOperand operand =
new DataElementOperand(
dataElement.getUid(),
optionCombo.getUid(),
dataElement.getName() + optionCombo.getName());
operands.add(operand);
}
} else {
DataElementOperand operand =
new DataElementOperand(
dataElement.getUid(),
optionCombos.iterator().next().getUid(),
dataElement.getName());
operands.add(operand);
}
}
return SUCCESS;
}
@Override
public void setUpTest() {
aggregationService = (AggregationService) getBean(AggregationService.ID);
categoryService = (DataElementCategoryService) getBean(DataElementCategoryService.ID);
dataElementService = (DataElementService) getBean(DataElementService.ID);
indicatorService = (IndicatorService) getBean(IndicatorService.ID);
dataSetService = (DataSetService) getBean(DataSetService.ID);
periodService = (PeriodService) getBean(PeriodService.ID);
organisationUnitService = (OrganisationUnitService) getBean(OrganisationUnitService.ID);
dataValueService = (DataValueService) getBean(DataValueService.ID);
expressionService = (ExpressionService) getBean(ExpressionService.ID);
// ---------------------------------------------------------------------
// Setup Dimensions
// ---------------------------------------------------------------------
categoryOptionA = new DataElementCategoryOption("Male");
categoryOptionB = new DataElementCategoryOption("Female");
categoryService.addDataElementCategoryOption(categoryOptionA);
categoryService.addDataElementCategoryOption(categoryOptionB);
category = new DataElementCategory("Gender");
category.getCategoryOptions().add(categoryOptionA);
category.getCategoryOptions().add(categoryOptionB);
categoryService.addDataElementCategory(category);
categoryCombo = new DataElementCategoryCombo("Gender");
categoryCombo.getCategories().add(category);
categoryService.addDataElementCategoryCombo(categoryCombo);
categoryOptionComboA = createCategoryOptionCombo(categoryCombo, categoryOptionA);
categoryOptionComboB = createCategoryOptionCombo(categoryCombo, categoryOptionB);
categoryService.addDataElementCategoryOptionCombo(categoryOptionComboA);
categoryService.addDataElementCategoryOptionCombo(categoryOptionComboB);
// ---------------------------------------------------------------------
// Setup DataElements
// ---------------------------------------------------------------------
dataElementA =
createDataElement(
'A', DataElement.VALUE_TYPE_INT, DataElement.AGGREGATION_OPERATOR_SUM, categoryCombo);
dataElementB =
createDataElement(
'B', DataElement.VALUE_TYPE_BOOL, DataElement.AGGREGATION_OPERATOR_SUM, categoryCombo);
dataElementC =
createDataElement(
'C', DataElement.VALUE_TYPE_INT, DataElement.AGGREGATION_OPERATOR_SUM, categoryCombo);
dataElementService.addDataElement(dataElementA);
dataElementService.addDataElement(dataElementB);
dataElementService.addDataElement(dataElementC);
// ---------------------------------------------------------------------
// Setup Indicators
// ---------------------------------------------------------------------
indicatorType = createIndicatorType('A');
indicatorType.setFactor(100);
indicatorService.addIndicatorType(indicatorType);
indicatorA = createIndicator('A', indicatorType);
indicatorA.setNumerator(
"#{" + dataElementA.getUid() + SEPARATOR + categoryOptionComboA.getUid() + "}+150");
indicatorA.setDenominator(
"#{" + dataElementB.getUid() + SEPARATOR + categoryOptionComboA.getUid() + "}");
indicatorB = createIndicator('B', indicatorType);
indicatorB.setNumerator("#{" + dataElementC.getUid() + "}");
indicatorB.setDenominator("1");
indicatorService.addIndicator(indicatorA);
indicatorService.addIndicator(indicatorB);
// ---------------------------------------------------------------------
// Setup DataSets (to get correct PeriodType for DataElements)
// ---------------------------------------------------------------------
dataSet = createDataSet('A', new MonthlyPeriodType());
dataSet.getDataElements().add(dataElementA);
dataSet.getDataElements().add(dataElementB);
dataSetService.addDataSet(dataSet);
dataElementA.getDataSets().add(dataSet);
dataElementB.getDataSets().add(dataSet);
dataElementC.getDataSets().add(dataSet);
dataElementService.updateDataElement(dataElementA);
dataElementService.updateDataElement(dataElementB);
dataElementService.updateDataElement(dataElementC);
// ---------------------------------------------------------------------
// Setup Periods
// ---------------------------------------------------------------------
PeriodType monthly = new MonthlyPeriodType();
periodA = createPeriod(monthly, mar01, mar31);
periodB = createPeriod(monthly, apr01, apr30);
periodC = createPeriod(monthly, may01, may31);
periodService.addPeriod(periodA);
periodService.addPeriod(periodB);
periodService.addPeriod(periodC);
// ---------------------------------------------------------------------
// Setup OrganisationUnits
// ---------------------------------------------------------------------
unitA = createOrganisationUnit('A');
unitB = createOrganisationUnit('B', unitA);
unitC = createOrganisationUnit('C', unitA);
unitD = createOrganisationUnit('D', unitB);
unitE = createOrganisationUnit('E', unitB);
unitF = createOrganisationUnit('F', unitB);
unitG = createOrganisationUnit('G', unitF);
unitH = createOrganisationUnit('H', unitF);
unitI = createOrganisationUnit('I');
organisationUnitService.addOrganisationUnit(unitA);
organisationUnitService.addOrganisationUnit(unitB);
organisationUnitService.addOrganisationUnit(unitC);
organisationUnitService.addOrganisationUnit(unitD);
organisationUnitService.addOrganisationUnit(unitE);
organisationUnitService.addOrganisationUnit(unitF);
organisationUnitService.addOrganisationUnit(unitG);
organisationUnitService.addOrganisationUnit(unitH);
organisationUnitService.addOrganisationUnit(unitI);
// ---------------------------------------------------------------------
// Setup DataValues
// ---------------------------------------------------------------------
dataValueService.addDataValue(
createDataValue(dataElementA, periodA, unitC, "90", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodA, unitD, "10", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodA, unitE, "35", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodA, unitF, "25", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodA, unitG, "20", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodA, unitH, "60", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodB, unitC, "70", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodB, unitD, "40", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodB, unitE, "65", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodB, unitF, "55", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodB, unitG, "20", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodB, unitH, "15", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodC, unitC, "95", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodC, unitD, "40", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodC, unitE, "45", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodC, unitF, "30", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodC, unitG, "50", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementA, periodC, unitH, "70", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodA, unitC, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodA, unitD, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodA, unitE, F, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodA, unitF, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodA, unitG, F, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodA, unitH, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodB, unitC, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodB, unitD, F, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodB, unitE, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodB, unitF, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodB, unitG, F, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodB, unitH, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodC, unitC, F, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodC, unitD, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodC, unitE, F, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodC, unitF, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodC, unitG, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementB, periodC, unitH, T, categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementC, periodA, unitB, "30", categoryOptionComboA));
dataValueService.addDataValue(
createDataValue(dataElementC, periodA, unitB, "20", categoryOptionComboB));
aggregationService.clearCache();
}
@Transactional
public void matchObject(int importObjectId, int existingObjectId) {
ImportObject importObject = importObjectStore.getImportObject(importObjectId);
Object object = importObject.getObject();
// ---------------------------------------------------------------------
// Updates the name of the import object to the name of the existing
// object.
// ---------------------------------------------------------------------
if (object.getClass().equals(DataElement.class)) {
DataElement element = (DataElement) object;
element.setName(dataElementService.getDataElement(existingObjectId).getName());
} else if (object.getClass().equals(DataElementGroup.class)) {
DataElementGroup group = (DataElementGroup) object;
group.setName(dataElementService.getDataElementGroup(existingObjectId).getName());
} else if (object.getClass().equals(DataElementGroupSet.class)) {
DataElementGroupSet groupSet = (DataElementGroupSet) object;
groupSet.setName(dataElementService.getDataElementGroupSet(existingObjectId).getName());
} else if (object.getClass().equals(IndicatorType.class)) {
IndicatorType type = (IndicatorType) object;
type.setName(indicatorService.getIndicatorType(existingObjectId).getName());
} else if (object.getClass().equals(Indicator.class)) {
Indicator indicator = (Indicator) object;
indicator.setName(indicatorService.getIndicator(existingObjectId).getName());
} else if (object.getClass().equals(IndicatorGroup.class)) {
IndicatorGroup group = (IndicatorGroup) object;
group.setName(indicatorService.getIndicatorGroup(existingObjectId).getName());
} else if (object.getClass().equals(IndicatorGroupSet.class)) {
IndicatorGroupSet groupSet = (IndicatorGroupSet) object;
groupSet.setName(indicatorService.getIndicatorGroupSet(existingObjectId).getName());
} else if (object.getClass().equals(DataDictionary.class)) {
DataDictionary dictionary = (DataDictionary) object;
dictionary.setName(dataDictionaryService.getDataDictionary(existingObjectId).getName());
} else if (object.getClass().equals(DataSet.class)) {
DataSet dataSet = (DataSet) object;
dataSet.setName(dataSetService.getDataSet(existingObjectId).getName());
} else if (object.getClass().equals(OrganisationUnit.class)) {
OrganisationUnit unit = (OrganisationUnit) object;
unit.setName(organisationUnitService.getOrganisationUnit(existingObjectId).getName());
} else if (object.getClass().equals(OrganisationUnitGroup.class)) {
OrganisationUnitGroup group = (OrganisationUnitGroup) object;
group.setName(
organisationUnitGroupService.getOrganisationUnitGroup(existingObjectId).getName());
} else if (object.getClass().equals(OrganisationUnitGroupSet.class)) {
OrganisationUnitGroupSet groupSet = (OrganisationUnitGroupSet) object;
groupSet.setName(
organisationUnitGroupService.getOrganisationUnitGroupSet(existingObjectId).getName());
} else if (object.getClass().equals(OrganisationUnitLevel.class)) {
OrganisationUnitLevel level = (OrganisationUnitLevel) object;
level.setName(organisationUnitService.getOrganisationUnitLevel(existingObjectId).getName());
} else if (object.getClass().equals(ValidationRule.class)) {
ValidationRule validationRule = (ValidationRule) object;
validationRule.setName(validationRuleService.getValidationRule(existingObjectId).getName());
} else if (object.getClass().equals(Report.class)) {
Report report = (Report) object;
report.setName(reportService.getReport(existingObjectId).getName());
} else if (object.getClass().equals(ReportTable.class)) {
ReportTable reportTable = (ReportTable) object;
reportTable.setName(reportTableService.getReportTable(existingObjectId).getName());
} else if (object.getClass().equals(Chart.class)) {
Chart chart = (Chart) object;
chart.setName(chartService.getChart(existingObjectId).getName());
} else if (object.getClass().equals(DataValue.class)) {
DataValue dataValue = (DataValue) object;
dataValue =
updateDataValue(
dataValue,
dataValueService.getDataValue(
dataValue.getSource(),
dataValue.getDataElement(),
dataValue.getPeriod(),
dataValue.getOptionCombo()));
}
// ---------------------------------------------------------------------
// Sets the status of the import object to match, these objects will
// later be ignored on import all but is needed for matching of
// associations.
// ---------------------------------------------------------------------
importObject.setStatus(ImportObjectStatus.MATCH);
importObjectStore.updateImportObject(importObject);
}
/** TODO replace string value type on data element with ValueType and remove this method. */
public static ValueType getFromDataElement(DataElement dataElement) {
if (DataElement.VALUE_TYPE_STRING.equals(dataElement.getType())) {
if (DataElement.VALUE_TYPE_LONG_TEXT.equals(dataElement.getTextType())) {
return ValueType.LONG_TEXT;
} else {
return ValueType.TEXT;
}
} else if (DataElement.VALUE_TYPE_INT.equals(dataElement.getType())) {
if (DataElement.VALUE_TYPE_UNIT_INTERVAL.equals(dataElement.getNumberType())) {
return ValueType.UNIT_INTERVAL;
} else if (DataElement.VALUE_TYPE_PERCENTAGE.equals(dataElement.getNumberType())) {
return ValueType.PERCENTAGE;
} else if (DataElement.VALUE_TYPE_INT.equals(dataElement.getNumberType())) {
return ValueType.INTEGER;
} else if (DataElement.VALUE_TYPE_POSITIVE_INT.equals(dataElement.getNumberType())) {
return ValueType.INTEGER_POSITIVE;
} else if (DataElement.VALUE_TYPE_ZERO_OR_POSITIVE_INT.equals(dataElement.getNumberType())) {
return ValueType.INTEGER_ZERO_OR_POSITIVE;
} else if (DataElement.VALUE_TYPE_NEGATIVE_INT.equals(dataElement.getNumberType())) {
return ValueType.INTEGER_NEGATIVE;
} else {
return ValueType.NUMBER;
}
} else if (DataElement.VALUE_TYPE_BOOL.equals(dataElement.getType())) {
return ValueType.BOOLEAN;
} else if (DataElement.VALUE_TYPE_TRUE_ONLY.equals(dataElement.getType())) {
return ValueType.TRUE_ONLY;
} else if (DataElement.VALUE_TYPE_DATE.equals(dataElement.getType())) {
return ValueType.DATE;
} else if (DataElement.VALUE_TYPE_DATETIME.equals(dataElement.getType())) {
return ValueType.DATETIME;
}
return ValueType.TEXT; // Fall back
}
@Override
public void setUpTest() {
// ---------------------------------------------------------------------
// Services
// ---------------------------------------------------------------------
dataIntegrityService = (DataIntegrityService) getBean(DataIntegrityService.ID);
dataElementService = (DataElementService) getBean(DataElementService.ID);
indicatorService = (IndicatorService) getBean(IndicatorService.ID);
dataSetService = (DataSetService) getBean(DataSetService.ID);
organisationUnitService = (OrganisationUnitService) getBean(OrganisationUnitService.ID);
organisationUnitGroupService =
(OrganisationUnitGroupService) getBean(OrganisationUnitGroupService.ID);
// ---------------------------------------------------------------------
// Objects
// ---------------------------------------------------------------------
elementA = createDataElement('A');
elementB = createDataElement('B');
elementC = createDataElement('C');
dataElementService.addDataElement(elementA);
dataElementService.addDataElement(elementB);
dataElementService.addDataElement(elementC);
indicatorTypeA = createIndicatorType('A');
indicatorService.addIndicatorType(indicatorTypeA);
indicatorA = createIndicator('A', indicatorTypeA);
indicatorB = createIndicator('B', indicatorTypeA);
indicatorC = createIndicator('C', indicatorTypeA);
indicatorA.setNumerator(" ");
indicatorB.setNumerator("Numerator");
indicatorB.setDenominator("Denominator");
indicatorC.setNumerator("Numerator");
indicatorC.setDenominator("Denominator");
indicatorService.addIndicator(indicatorA);
indicatorService.addIndicator(indicatorB);
indicatorService.addIndicator(indicatorC);
unitA = createOrganisationUnit('A');
unitB = createOrganisationUnit('B', unitA);
unitC = createOrganisationUnit('C', unitB);
unitD = createOrganisationUnit('D', unitC);
unitE = createOrganisationUnit('E', unitD);
unitF = createOrganisationUnit('F');
organisationUnitService.addOrganisationUnit(unitA);
organisationUnitService.addOrganisationUnit(unitB);
organisationUnitService.addOrganisationUnit(unitC);
organisationUnitService.addOrganisationUnit(unitD);
organisationUnitService.addOrganisationUnit(unitE);
organisationUnitService.addOrganisationUnit(unitF);
unitA.setParent(unitC);
organisationUnitService.updateOrganisationUnit(unitA);
dataSetA = createDataSet('A', new MonthlyPeriodType());
dataSetB = createDataSet('B', new QuarterlyPeriodType());
dataSetA.getDataElements().add(elementA);
dataSetA.getDataElements().add(elementB);
elementA.getDataSets().add(dataSetA);
elementB.getDataSets().add(dataSetA);
dataSetA.getSources().add(unitA);
unitA.getDataSets().add(dataSetA);
dataSetB.getDataElements().add(elementA);
elementA.getDataSets().add(dataSetB);
dataSetService.addDataSet(dataSetA);
dataSetService.addDataSet(dataSetB);
// ---------------------------------------------------------------------
// Groups
// ---------------------------------------------------------------------
elementGroupA = createDataElementGroup('A');
elementGroupA.getMembers().add(elementA);
elementA.getGroups().add(elementGroupA);
dataElementService.addDataElementGroup(elementGroupA);
indicatorGroupA = createIndicatorGroup('A');
indicatorGroupA.getMembers().add(indicatorA);
indicatorA.getGroups().add(indicatorGroupA);
indicatorService.addIndicatorGroup(indicatorGroupA);
unitGroupA = createOrganisationUnitGroup('A');
unitGroupB = createOrganisationUnitGroup('B');
unitGroupC = createOrganisationUnitGroup('C');
unitGroupD = createOrganisationUnitGroup('D');
unitGroupA.getMembers().add(unitA);
unitGroupA.getMembers().add(unitB);
unitGroupA.getMembers().add(unitC);
unitA.getGroups().add(unitGroupA);
unitB.getGroups().add(unitGroupA);
unitC.getGroups().add(unitGroupA);
unitGroupB.getMembers().add(unitA);
unitGroupB.getMembers().add(unitB);
unitGroupB.getMembers().add(unitF);
unitA.getGroups().add(unitGroupB);
unitB.getGroups().add(unitGroupB);
unitF.getGroups().add(unitGroupB);
unitGroupC.getMembers().add(unitA);
unitA.getGroups().add(unitGroupC);
organisationUnitGroupService.addOrganisationUnitGroup(unitGroupA);
organisationUnitGroupService.addOrganisationUnitGroup(unitGroupB);
organisationUnitGroupService.addOrganisationUnitGroup(unitGroupC);
organisationUnitGroupService.addOrganisationUnitGroup(unitGroupD);
// ---------------------------------------------------------------------
// Group sets
// ---------------------------------------------------------------------
unitGroupSetA = createOrganisationUnitGroupSet('A');
unitGroupSetB = createOrganisationUnitGroupSet('B');
unitGroupSetA.setCompulsory(true);
unitGroupSetB.setCompulsory(false);
unitGroupSetA.getOrganisationUnitGroups().add(unitGroupA);
unitGroupA.setGroupSet(unitGroupSetA);
unitGroupSetB.getOrganisationUnitGroups().add(unitGroupB);
unitGroupSetB.getOrganisationUnitGroups().add(unitGroupC);
unitGroupB.setGroupSet(unitGroupSetB);
unitGroupC.setGroupSet(unitGroupSetB);
organisationUnitGroupService.addOrganisationUnitGroupSet(unitGroupSetA);
organisationUnitGroupService.addOrganisationUnitGroupSet(unitGroupSetB);
}
@Transactional
public void cascadeDeleteImportObject(int importObjectId) {
ImportObject importObject = importObjectStore.getImportObject(importObjectId);
if (importObject != null) {
if (importObject.getClassName().equals(DataElement.class.getName())) {
DataElement element = (DataElement) importObject.getObject();
deleteMemberAssociations(GroupMemberType.DATAELEMENTGROUP, element.getId());
deleteMemberAssociations(GroupMemberType.DATASET, element.getId());
deleteMemberAssociations(GroupMemberType.DATADICTIONARY_DATAELEMENT, element.getId());
deleteIndicatorsContainingDataElement(element.getId());
importDataValueService.deleteImportDataValuesByDataElement(element.getId());
} else if (importObject.getClassName().equals(DataElementGroup.class.getName())) {
DataElementGroup group = (DataElementGroup) importObject.getObject();
deleteGroupAssociations(GroupMemberType.DATAELEMENTGROUP, group.getId());
deleteMemberAssociations(GroupMemberType.DATAELEMENTGROUPSET, group.getId());
} else if (importObject.getClassName().equals(DataElementGroupSet.class.getName())) {
DataElementGroupSet groupSet = (DataElementGroupSet) importObject.getObject();
deleteGroupAssociations(GroupMemberType.DATAELEMENTGROUPSET, groupSet.getId());
} else if (importObject.getClassName().equals(IndicatorType.class.getName())) {
IndicatorType type = (IndicatorType) importObject.getObject();
deleteIndicatorsWithIndicatorType(type.getId());
} else if (importObject.getClassName().equals(Indicator.class.getName())) {
Indicator indicator = (Indicator) importObject.getObject();
deleteMemberAssociations(GroupMemberType.INDICATORGROUP, indicator.getId());
deleteMemberAssociations(GroupMemberType.DATADICTIONARY_INDICATOR, indicator.getId());
} else if (importObject.getClassName().equals(IndicatorGroup.class.getName())) {
IndicatorGroup group = (IndicatorGroup) importObject.getObject();
deleteGroupAssociations(GroupMemberType.INDICATORGROUP, group.getId());
deleteMemberAssociations(GroupMemberType.INDICATORGROUPSET, group.getId());
} else if (importObject.getClassName().equals(IndicatorGroupSet.class.getName())) {
IndicatorGroupSet groupSet = (IndicatorGroupSet) importObject.getObject();
deleteGroupAssociations(GroupMemberType.INDICATORGROUPSET, groupSet.getId());
} else if (importObject.getClassName().equals(DataDictionary.class.getName())) {
DataDictionary dictionary = (DataDictionary) importObject.getObject();
deleteGroupAssociations(GroupMemberType.DATADICTIONARY_DATAELEMENT, dictionary.getId());
deleteGroupAssociations(GroupMemberType.DATADICTIONARY_INDICATOR, dictionary.getId());
} else if (importObject.getClassName().equals(DataSet.class.getName())) {
DataSet dataSet = (DataSet) importObject.getObject();
deleteGroupAssociations(GroupMemberType.DATASET, dataSet.getId());
deleteMemberAssociations(GroupMemberType.DATASET_SOURCE, dataSet.getId());
deleteCompleteDataSetRegistrationsByDataSet(dataSet.getId());
} else if (importObject.getClassName().equals(OrganisationUnit.class.getName())) {
OrganisationUnit unit = (OrganisationUnit) importObject.getObject();
deleteMemberAssociations(GroupMemberType.ORGANISATIONUNITGROUP, unit.getId());
deleteGroupAssociations(GroupMemberType.ORGANISATIONUNITRELATIONSHIP, unit.getId());
deleteMemberAssociations(GroupMemberType.DATASET_SOURCE, unit.getId());
deleteMemberAssociations(GroupMemberType.ORGANISATIONUNITRELATIONSHIP, unit.getId());
deleteCompleteDataSetRegistrationsBySource(unit.getId());
importDataValueService.deleteImportDataValuesBySource(unit.getId());
} else if (importObject.getClassName().equals(OrganisationUnitGroup.class.getName())) {
OrganisationUnitGroup group = (OrganisationUnitGroup) importObject.getObject();
deleteGroupAssociations(GroupMemberType.ORGANISATIONUNITGROUP, group.getId());
deleteMemberAssociations(GroupMemberType.ORGANISATIONUNITGROUPSET, group.getId());
} else if (importObject.getClassName().equals(OrganisationUnitGroupSet.class.getName())) {
OrganisationUnitGroupSet groupSet = (OrganisationUnitGroupSet) importObject.getObject();
deleteGroupAssociations(GroupMemberType.ORGANISATIONUNITGROUPSET, groupSet.getId());
}
}
deleteImportObject(importObjectId);
}
@Override
public boolean retain(DataElement object) {
return object != null && VALUE_TYPES.contains(object.getValueType());
}
/**
* Creates a table with the given data element
*
* @param element The data element
* @param i18n i18n object
* @param HEADER3 The header3 font
* @param ITALIC The italic font
* @param TEXT The text font
* @param keepTogether Indicates whether the table could be broken across multiple pages or should
* be kept at one page.
* @param columnWidths The column widths.
*/
public static PdfPTable printDataElement(
DataElement element, I18n i18n, boolean keepTogether, float... columnWidths) {
PdfPTable table = getPdfPTable(keepTogether, columnWidths);
table.addCell(getHeaderCell(element.getName(), 2));
table.addCell(getEmptyCell(2, 15));
table.addCell(getItalicCell(i18n.getString("short_name")));
table.addCell(getTextCell(element.getShortName()));
if (nullIfEmpty(element.getCode()) != null) {
table.addCell(getItalicCell(i18n.getString("code")));
table.addCell(getTextCell(element.getCode()));
}
if (nullIfEmpty(element.getDescription()) != null) {
table.addCell(getItalicCell(i18n.getString("description")));
table.addCell(getTextCell(element.getDescription()));
}
if (nullIfEmpty(element.getType()) != null) {
table.addCell(getItalicCell(i18n.getString("value_type")));
table.addCell(getTextCell(i18n.getString(getType().get(element.getType()))));
}
if (nullIfEmpty(element.getAggregationOperator()) != null) {
table.addCell(getItalicCell(i18n.getString("aggregation_operator")));
table.addCell(
getTextCell(
i18n.getString(getAggregationOperator().get(element.getAggregationOperator()))));
}
for (AttributeValue value : element.getAttributeValues()) {
table.addCell(getItalicCell(value.getAttribute().getName()));
table.addCell(getTextCell(value.getValue()));
}
table.addCell(getEmptyCell(2, 30));
return table;
}
@Override
public void setUpTest() {
// ---------------------------------------------------------------------
// Services
// ---------------------------------------------------------------------
importObjectService = (ImportObjectService) getBean(ImportObjectService.ID);
batchHandlerFactory = (BatchHandlerFactory) getBean("batchHandlerFactory");
dataElementService = (DataElementService) getBean(DataElementService.ID);
categoryService = (DataElementCategoryService) getBean(DataElementCategoryService.ID);
periodService = (PeriodService) getBean(PeriodService.ID);
organisationUnitService = (OrganisationUnitService) getBean(OrganisationUnitService.ID);
dataValueService = (DataValueService) getBean(DataValueService.ID);
// ---------------------------------------------------------------------
// CategoryOption
// ---------------------------------------------------------------------
categoryOptionA = new DataElementCategoryOption("CategoryOptionA");
categoryOptionB = new DataElementCategoryOption("CategoryOptionB");
categoryOptionC = new DataElementCategoryOption("CategoryOptionC");
categoryOptionD = new DataElementCategoryOption("CategoryOptionD");
categoryService.addDataElementCategoryOption(categoryOptionA);
categoryService.addDataElementCategoryOption(categoryOptionB);
categoryService.addDataElementCategoryOption(categoryOptionC);
categoryService.addDataElementCategoryOption(categoryOptionD);
categoryOptionADuplicate = new DataElementCategoryOption("CategoryOptionA");
categoryOptionBDuplicate = new DataElementCategoryOption("CategoryOptionB");
categoryOptionCDuplicate = new DataElementCategoryOption("CategoryOptionC");
categoryOptionDDuplicate = new DataElementCategoryOption("CategoryOptionD");
categoryOptionADuplicate.setId('A');
categoryOptionBDuplicate.setId('B');
categoryOptionCDuplicate.setId('C');
categoryOptionDDuplicate.setId('D');
importObjectService.addImportObject(ImportObjectStatus.MATCH, categoryOptionADuplicate, null);
importObjectService.addImportObject(ImportObjectStatus.MATCH, categoryOptionBDuplicate, null);
importObjectService.addImportObject(ImportObjectStatus.MATCH, categoryOptionCDuplicate, null);
importObjectService.addImportObject(ImportObjectStatus.MATCH, categoryOptionDDuplicate, null);
// ---------------------------------------------------------------------
// Category
// ---------------------------------------------------------------------
categoryA = new DataElementCategory("CategoryA");
categoryB = new DataElementCategory("CategoryB");
categoryA.getCategoryOptions().add(categoryOptionA);
categoryA.getCategoryOptions().add(categoryOptionB);
categoryB.getCategoryOptions().add(categoryOptionC);
categoryB.getCategoryOptions().add(categoryOptionD);
categoryService.addDataElementCategory(categoryA);
categoryService.addDataElementCategory(categoryB);
categoryADuplicate = new DataElementCategory("CategoryA");
categoryBDuplicate = new DataElementCategory("CategoryB");
categoryADuplicate.setId('A');
categoryBDuplicate.setId('B');
importObjectService.addImportObject(ImportObjectStatus.MATCH, categoryADuplicate, null);
importObjectService.addImportObject(ImportObjectStatus.MATCH, categoryBDuplicate, null);
// ---------------------------------------------------------------------
// Category - CategoryOption Association
// ---------------------------------------------------------------------
categoryCategoryOptionAssociationA = new GroupMemberAssociation('A', 'A', 1);
categoryCategoryOptionAssociationB = new GroupMemberAssociation('A', 'B', 2);
categoryCategoryOptionAssociationC = new GroupMemberAssociation('B', 'C', 1);
categoryCategoryOptionAssociationD = new GroupMemberAssociation('B', 'D', 2);
importObjectService.addImportObject(
ImportObjectStatus.NEW,
GroupMemberType.CATEGORY_CATEGORYOPTION,
categoryCategoryOptionAssociationA);
importObjectService.addImportObject(
ImportObjectStatus.NEW,
GroupMemberType.CATEGORY_CATEGORYOPTION,
categoryCategoryOptionAssociationB);
importObjectService.addImportObject(
ImportObjectStatus.NEW,
GroupMemberType.CATEGORY_CATEGORYOPTION,
categoryCategoryOptionAssociationC);
importObjectService.addImportObject(
ImportObjectStatus.NEW,
GroupMemberType.CATEGORY_CATEGORYOPTION,
categoryCategoryOptionAssociationD);
// ---------------------------------------------------------------------
// CategoryCombo
// ---------------------------------------------------------------------
categoryComboA = new DataElementCategoryCombo("CategoryComboA");
categoryComboB = new DataElementCategoryCombo("CategoryComboB");
categoryComboA.getCategories().add(categoryA);
categoryComboA.getCategories().add(categoryB);
categoryComboB.getCategories().add(categoryA);
categoryService.addDataElementCategoryCombo(categoryComboA);
categoryService.addDataElementCategoryCombo(categoryComboB);
categoryComboADuplicate = new DataElementCategoryCombo("CategoryComboA");
categoryComboBDuplicate = new DataElementCategoryCombo("CategoryComboB");
categoryComboADuplicate.setId('A');
categoryComboBDuplicate.setId('B');
importObjectService.addImportObject(ImportObjectStatus.MATCH, categoryComboADuplicate, null);
importObjectService.addImportObject(ImportObjectStatus.MATCH, categoryComboBDuplicate, null);
// ---------------------------------------------------------------------
// CategoryCombo - Category Association
// ---------------------------------------------------------------------
categoryComboCategoryAssociationA = new GroupMemberAssociation('A', 'A', 1);
categoryComboCategoryAssociationB = new GroupMemberAssociation('A', 'B', 2);
categoryComboCategoryAssociationC = new GroupMemberAssociation('B', 'A', 1);
importObjectService.addImportObject(
ImportObjectStatus.NEW,
GroupMemberType.CATEGORYCOMBO_CATEGORY,
categoryComboCategoryAssociationA);
importObjectService.addImportObject(
ImportObjectStatus.NEW,
GroupMemberType.CATEGORYCOMBO_CATEGORY,
categoryComboCategoryAssociationB);
importObjectService.addImportObject(
ImportObjectStatus.NEW,
GroupMemberType.CATEGORYCOMBO_CATEGORY,
categoryComboCategoryAssociationC);
// ---------------------------------------------------------------------
// CategoryOptionCombo
// ---------------------------------------------------------------------
categoryOptionComboA = new DataElementCategoryOptionCombo();
categoryOptionComboB = new DataElementCategoryOptionCombo();
categoryOptionComboC = new DataElementCategoryOptionCombo();
categoryOptionComboD = new DataElementCategoryOptionCombo();
categoryOptionComboA.setCategoryCombo(categoryComboA);
categoryOptionComboB.setCategoryCombo(categoryComboA);
categoryOptionComboC.setCategoryCombo(categoryComboB);
categoryOptionComboD.setCategoryCombo(categoryComboB);
categoryOptionComboA.getCategoryOptions().add(categoryOptionA);
categoryOptionComboA.getCategoryOptions().add(categoryOptionC);
categoryOptionComboB.getCategoryOptions().add(categoryOptionB);
categoryOptionComboB.getCategoryOptions().add(categoryOptionD);
categoryOptionComboC.getCategoryOptions().add(categoryOptionA);
categoryOptionComboD.getCategoryOptions().add(categoryOptionB);
categoryService.addDataElementCategoryOptionCombo(categoryOptionComboA);
categoryService.addDataElementCategoryOptionCombo(categoryOptionComboB);
categoryService.addDataElementCategoryOptionCombo(categoryOptionComboC);
categoryService.addDataElementCategoryOptionCombo(categoryOptionComboD);
categoryOptionComboADuplicate = new DataElementCategoryOptionCombo();
categoryOptionComboBDuplicate = new DataElementCategoryOptionCombo();
categoryOptionComboCDuplicate = new DataElementCategoryOptionCombo();
categoryOptionComboDDuplicate = new DataElementCategoryOptionCombo();
categoryOptionComboADuplicate.setId('A');
categoryOptionComboBDuplicate.setId('B');
categoryOptionComboCDuplicate.setId('C');
categoryOptionComboDDuplicate.setId('D');
categoryOptionComboADuplicate.setCategoryCombo(categoryComboADuplicate);
categoryOptionComboBDuplicate.setCategoryCombo(categoryComboADuplicate);
categoryOptionComboCDuplicate.setCategoryCombo(categoryComboBDuplicate);
categoryOptionComboDDuplicate.setCategoryCombo(categoryComboBDuplicate);
categoryOptionComboADuplicate.getCategoryOptions().add(categoryOptionADuplicate);
categoryOptionComboADuplicate.getCategoryOptions().add(categoryOptionCDuplicate);
categoryOptionComboBDuplicate.getCategoryOptions().add(categoryOptionBDuplicate);
categoryOptionComboBDuplicate.getCategoryOptions().add(categoryOptionDDuplicate);
categoryOptionComboCDuplicate.getCategoryOptions().add(categoryOptionADuplicate);
categoryOptionComboDDuplicate.getCategoryOptions().add(categoryOptionBDuplicate);
importObjectService.addImportObject(
ImportObjectStatus.MATCH, categoryOptionComboADuplicate, null);
importObjectService.addImportObject(
ImportObjectStatus.MATCH, categoryOptionComboBDuplicate, null);
importObjectService.addImportObject(
ImportObjectStatus.MATCH, categoryOptionComboCDuplicate, null);
importObjectService.addImportObject(
ImportObjectStatus.MATCH, categoryOptionComboDDuplicate, null);
// ---------------------------------------------------------------------
// DataElement
// ---------------------------------------------------------------------
dataElementA = createDataElement('A', categoryComboA);
dataElementB = createDataElement('B', categoryComboA);
dataElementC = createDataElement('C', categoryComboA);
dataElementD = createDataElement('D', categoryComboA);
dataElementAModified = createDataElement('A', categoryComboADuplicate);
dataElementBModified = createDataElement('B', categoryComboADuplicate);
dataElementCModified = createDataElement('C', categoryComboADuplicate);
dataElementDModified = createDataElement('D', categoryComboADuplicate);
dataElementAModified.setId('A');
dataElementBModified.setId('B');
dataElementCModified.setId('C');
dataElementDModified.setId('D');
dataElementAModified.setShortName("ShortNameModifiedA");
dataElementBModified.setShortName("ShortNameModifiedB");
dataElementCModified.setShortName("ShortNameModifiedC");
dataElementDModified.setShortName("ShortNameModifiedD");
// ---------------------------------------------------------------------
// DataElementGroup
// ---------------------------------------------------------------------
dataElementGroupA = createDataElementGroup('A');
dataElementGroupB = createDataElementGroup('B');
dataElementGroupC = createDataElementGroup('C');
dataElementGroupADuplicate = createDataElementGroup('A');
dataElementGroupBDuplicate = createDataElementGroup('B');
dataElementGroupCDuplicate = createDataElementGroup('C');
dataElementGroupADuplicate.setId('A');
dataElementGroupBDuplicate.setId('B');
dataElementGroupCDuplicate.setId('C');
dataElementGroupAssociationA = new GroupMemberAssociation('A', 'A');
dataElementGroupAssociationB = new GroupMemberAssociation('A', 'B');
dataElementGroupAssociationC = new GroupMemberAssociation('A', 'C');
dataElementGroupAssociationD = new GroupMemberAssociation('A', 'D');
dataElementGroupAssociationE = new GroupMemberAssociation('B', 'A');
dataElementGroupAssociationF = new GroupMemberAssociation('B', 'B');
dataElementGroupAssociationG = new GroupMemberAssociation('B', 'C');
dataElementGroupAssociationH = new GroupMemberAssociation('B', 'D');
dataElementGroupAssociationI = new GroupMemberAssociation('C', 'A');
dataElementGroupAssociationJ = new GroupMemberAssociation('C', 'B');
dataElementGroupAssociationK = new GroupMemberAssociation('C', 'C');
dataElementGroupAssociationL = new GroupMemberAssociation('C', 'D');
// ---------------------------------------------------------------------
// Period
// ---------------------------------------------------------------------
periodTypeA = periodService.getPeriodTypeByName(MonthlyPeriodType.NAME);
periodA = createPeriod(periodTypeA, getDate(1, 0, 2000), getDate(31, 0, 2000));
periodADuplicate = createPeriod(periodTypeA, getDate(1, 0, 2000), getDate(31, 0, 2000));
periodADuplicate.setId('A');
// ---------------------------------------------------------------------
// OrganisationUnit
// ---------------------------------------------------------------------
organisationUnitA = createOrganisationUnit('A');
organisationUnitB = createOrganisationUnit('B');
organisationUnitC = createOrganisationUnit('C');
organisationUnitAModified = createOrganisationUnit('A');
organisationUnitBModified = createOrganisationUnit('B');
organisationUnitCModified = createOrganisationUnit('C');
organisationUnitAModified.setId('A');
organisationUnitBModified.setId('B');
organisationUnitCModified.setId('C');
organisationUnitAModified.setShortName("ShortNameModifiedA");
organisationUnitBModified.setShortName("ShortNameModifiedB");
organisationUnitCModified.setShortName("ShortNameModifiedC");
// ---------------------------------------------------------------------
// RelationshipAssociation
// ---------------------------------------------------------------------
relationshipAssociationA = new GroupMemberAssociation('A', 'B');
relationshipAssociationB = new GroupMemberAssociation('B', 'C');
// ---------------------------------------------------------------------
// DataValue
// ---------------------------------------------------------------------
dataValueA =
createDataValue(dataElementA, periodA, organisationUnitA, "10", categoryOptionComboA);
dataValueB =
createDataValue(dataElementA, periodA, organisationUnitB, "10", categoryOptionComboA);
dataValueC =
createDataValue(dataElementA, periodA, organisationUnitC, "10", categoryOptionComboA);
dataValueD =
createDataValue(dataElementB, periodA, organisationUnitA, "10", categoryOptionComboA);
dataValueE =
createDataValue(dataElementB, periodA, organisationUnitB, "10", categoryOptionComboA);
dataValueF =
createDataValue(dataElementB, periodA, organisationUnitC, "10", categoryOptionComboA);
dataValueG =
createDataValue(dataElementC, periodA, organisationUnitA, "10", categoryOptionComboA);
dataValueH =
createDataValue(dataElementC, periodA, organisationUnitB, "10", categoryOptionComboA);
dataValueI =
createDataValue(dataElementC, periodA, organisationUnitC, "10", categoryOptionComboA);
dataValueADuplicate =
createDataValue(
dataElementAModified,
periodADuplicate,
organisationUnitAModified,
"10",
categoryOptionComboADuplicate);
dataValueBDuplicate =
createDataValue(
dataElementAModified,
periodADuplicate,
organisationUnitBModified,
"10",
categoryOptionComboADuplicate);
dataValueCDuplicate =
createDataValue(
dataElementAModified,
periodADuplicate,
organisationUnitCModified,
"10",
categoryOptionComboADuplicate);
dataValueDDuplicate =
createDataValue(
dataElementBModified,
periodADuplicate,
organisationUnitAModified,
"10",
categoryOptionComboADuplicate);
dataValueEDuplicate =
createDataValue(
dataElementBModified,
periodADuplicate,
organisationUnitBModified,
"10",
categoryOptionComboADuplicate);
dataValueFDuplicate =
createDataValue(
dataElementBModified,
periodADuplicate,
organisationUnitCModified,
"10",
categoryOptionComboADuplicate);
dataValueGDuplicate =
createDataValue(
dataElementCModified,
periodADuplicate,
organisationUnitAModified,
"10",
categoryOptionComboADuplicate);
dataValueHDuplicate =
createDataValue(
dataElementCModified,
periodADuplicate,
organisationUnitBModified,
"10",
categoryOptionComboADuplicate);
dataValueIDuplicate =
createDataValue(
dataElementCModified,
periodADuplicate,
organisationUnitCModified,
"10",
categoryOptionComboADuplicate);
}
@Override
public void setUpTest() {
mockDataValueBatchHandler = new MockBatchHandler<>();
mockBatchHandlerFactory = new MockBatchHandlerFactory();
mockBatchHandlerFactory.registerBatchHandler(
DataValueBatchHandler.class, mockDataValueBatchHandler);
setDependency(dataValueSetService, "batchHandlerFactory", mockBatchHandlerFactory);
categoryOptionA = createCategoryOption('A');
categoryOptionB = createCategoryOption('B');
categoryA = createDataElementCategory('A', categoryOptionA, categoryOptionB);
categoryComboA = createCategoryCombo('A', categoryA);
ocDef = categoryService.getDefaultDataElementCategoryOptionCombo();
ocA = createCategoryOptionCombo(categoryComboA, categoryOptionA);
ocB = createCategoryOptionCombo(categoryComboA, categoryOptionB);
deA = createDataElement('A');
deB = createDataElement('B');
deC = createDataElement('C');
deD = createDataElement('D');
dsA = createDataSet('A', new MonthlyPeriodType());
ouA = createOrganisationUnit('A');
ouB = createOrganisationUnit('B');
ouC = createOrganisationUnit('C');
peA =
createPeriod(
PeriodType.getByNameIgnoreCase(MonthlyPeriodType.NAME),
getDate(2012, 1, 1),
getDate(2012, 1, 31));
peB =
createPeriod(
PeriodType.getByNameIgnoreCase(MonthlyPeriodType.NAME),
getDate(2012, 2, 1),
getDate(2012, 2, 29));
ocA.setUid("kjuiHgy67hg");
ocB.setUid("Gad33qy67g5");
deA.setUid("f7n9E0hX8qk");
deB.setUid("Ix2HsbDMLea");
deC.setUid("eY5ehpbEsB7");
dsA.setUid("pBOMPrpg1QX");
ouA.setUid("DiszpKrYNg8");
ouB.setUid("BdfsJfj87js");
ouC.setUid("j7Hg26FpoIa");
ocA.setCode("OC_A");
ocB.setCode("OC_B");
deA.setCode("DE_A");
deB.setCode("DE_B");
deC.setCode("DE_C");
deD.setCode("DE_D");
dsA.setCode("DS_A");
ouA.setCode("OU_A");
ouB.setCode("OU_B");
ouC.setCode("OU_C");
categoryService.addDataElementCategoryOption(categoryOptionA);
categoryService.addDataElementCategoryOption(categoryOptionB);
categoryService.addDataElementCategory(categoryA);
categoryService.addDataElementCategoryCombo(categoryComboA);
categoryService.addDataElementCategoryOptionCombo(ocA);
categoryService.addDataElementCategoryOptionCombo(ocB);
dataElementService.addDataElement(deA);
dataElementService.addDataElement(deB);
dataElementService.addDataElement(deC);
dataElementService.addDataElement(deD);
dataSetService.addDataSet(dsA);
organisationUnitService.addOrganisationUnit(ouA);
organisationUnitService.addOrganisationUnit(ouB);
organisationUnitService.addOrganisationUnit(ouC);
periodService.addPeriod(peA);
periodService.addPeriod(peB);
user = createUser('A');
user.setOrganisationUnits(Sets.newHashSet(ouA, ouB));
CurrentUserService currentUserService = new MockCurrentUserService(user);
setDependency(dataValueSetService, "currentUserService", currentUserService);
}
@Override
public String execute() throws Exception {
ExportParams params = new ExportParams();
if (dataValue || dataValueDaily) {
params.setCategories(null);
params.setCategoryCombos(null);
params.setCategoryOptions(null);
params.setCategoryOptionCombos(null);
/*
* params.setDataElementGroups( null );
* params.setDataElementGroupSets( null ); params.setIndicators(
* null ); params.setIndicatorTypes( null );
* params.setIndicatorGroups( null ); params.setIndicatorGroupSets(
* null ); params.setDataDictionaries( null ); params.setDataSets(
* null ); params.setOrganisationUnitGroups( null );
* params.setOrganisationUnitGroupSets( null );
* params.setOrganisationUnitLevels( null );
* params.setValidationRules( null ); params.setReports( null );
* params.setReportTables( null ); params.setPeriods( null ); //
* TODO Include only relevant periods params.setCharts( null );
* params.setPeriods( null );
*/
Set<Integer> dataElementz = new HashSet<>();
Collection<DataElement> children = dataElementService.getAllDataElements();
for (DataElement child : children) {
dataElementz.add(child.getId());
}
params.setDataElements(dataElementz);
Set<Integer> orgUnits = new HashSet<>();
Collection<OrganisationUnit> orgChildren = organisationUnitService.getAllOrganisationUnits();
for (OrganisationUnit child : orgChildren) {
orgUnits.add(child.getId());
}
params.setOrganisationUnits(orgUnits);
}
if (dataValue) {
params.setMetaData(false);
}
if (dataValueDaily) {
params.setMetaData(false);
}
// params.setMetaData( true );
params.setIncludeDataValues(true);
params.setCurrentUser(currentUserService.getCurrentUser());
params.setDataValue(dataValue);
params.setDataValueDaily(dataValueDaily);
params.setI18n(i18n);
params.setFormat(format);
params.setStartDate(getMediumDate(startDate));
params.setEndDate(getMediumDate(endDate));
ExportService exportService = serviceProvider.provide(exportFormat);
inputStream = exportService.exportData(params);
fileName = FILENAME;
return SUCCESS;
}
public void generateReport(
Program selProgram, List<OrganisationUnit> orgUnitList, Date sDate, Date eDate)
throws Exception {
String raFolderName = reportService.getRAFolderName();
SimpleDateFormat simpleDateFormat = new SimpleDateFormat("yyyy-MM-dd");
String query = "";
int rowStart = 3;
int colStart = 1;
int rowCount = rowStart;
int colCount = colStart;
// String outputReportPath = System.getenv( "DHIS2_HOME" ) + File.separator + raFolderName +
// File.separator + "output" + File.separator + UUID.randomUUID().toString() + ".xls";
String outputReportPath =
System.getenv("DHIS2_HOME") + File.separator + Configuration_IN.DEFAULT_TEMPFOLDER;
File newdir = new File(outputReportPath);
if (!newdir.exists()) {
newdir.mkdirs();
}
outputReportPath += File.separator + UUID.randomUUID().toString() + ".xls";
WritableWorkbook outputReportWorkbook = Workbook.createWorkbook(new File(outputReportPath));
WritableSheet sheet0 = outputReportWorkbook.createSheet(selProgram.getName(), 0);
try {
List<PatientIdentifierType> patientIdentifierTypes =
new ArrayList<PatientIdentifierType>(
patientIdentifierTypeService.getAllPatientIdentifierTypes());
Collections.sort(patientIdentifierTypes, new PatientIdentifierTypeComparator());
List<PatientAttribute> patientAttributes =
new ArrayList<PatientAttribute>(patientAttributeService.getAllPatientAttributes());
Collections.sort(patientAttributes, new PatientAttributeComparator());
List<ProgramStage> programStages = new ArrayList<ProgramStage>(selProgram.getProgramStages());
Collections.sort(programStages, new ProgramStageOrderComparator());
Map<ProgramStage, List<DataElement>> programStageDataElementMap =
new HashMap<ProgramStage, List<DataElement>>();
for (ProgramStage programStage : programStages) {
List<ProgramStageDataElement> programStageDataElements =
new ArrayList<ProgramStageDataElement>(programStage.getProgramStageDataElements());
List<DataElement> dataElements = new ArrayList<DataElement>();
for (ProgramStageDataElement programStageDataElement : programStageDataElements) {
dataElements.add(programStageDataElement.getDataElement());
}
Collections.sort(dataElements, new IdentifiableObjectNameComparator());
programStageDataElementMap.put(programStage, dataElements);
}
// Printing Header Information
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "OrgUnit Hierarchy", getCellFormat1()));
colCount++;
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "OrgUnit", getCellFormat1()));
colCount++;
for (PatientIdentifierType patientIdentifierType : patientIdentifierTypes) {
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(
new Label(colCount, rowCount - 1, patientIdentifierType.getName(), getCellFormat1()));
colCount++;
}
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Benificiary ID", getCellFormat1()));
colCount++;
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Benificiary Name", getCellFormat1()));
colCount++;
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Gender", getCellFormat1()));
colCount++;
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Age", getCellFormat1()));
colCount++;
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Data of Birth", getCellFormat1()));
colCount++;
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Blood Group", getCellFormat1()));
colCount++;
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Registration Date", getCellFormat1()));
colCount++;
for (PatientAttribute patientAttribute : patientAttributes) {
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(
new Label(colCount, rowCount - 1, patientAttribute.getName(), getCellFormat1()));
colCount++;
}
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Incident Date", getCellFormat1()));
colCount++;
sheet0.mergeCells(colCount, rowCount - 1, colCount, rowCount);
sheet0.addCell(new Label(colCount, rowCount - 1, "Enrollment Date", getCellFormat1()));
colCount++;
for (ProgramStage programStage : programStages) {
List<DataElement> dataElementList =
new ArrayList<DataElement>(programStageDataElementMap.get(programStage));
sheet0.mergeCells(
colCount, rowCount - 1, colCount + dataElementList.size() + 1, rowCount - 1);
sheet0.addCell(new Label(colCount, rowCount - 1, programStage.getName(), getCellFormat1()));
sheet0.addCell(new Label(colCount, rowCount, "Due Date", getCellFormat1()));
colCount++;
sheet0.addCell(new Label(colCount, rowCount, "Execution Date", getCellFormat1()));
colCount++;
for (DataElement dataElement : dataElementList) {
sheet0.addCell(
new Label(
colCount,
rowCount,
dataElement.getName() + "--" + dataElement.getType(),
getCellFormat1()));
colCount++;
}
}
rowCount++;
for (OrganisationUnit orgUnit : orgUnitList) {
if (sDate != null && eDate != null) {
query =
"SELECT patient.patientid, programinstance.programinstanceid,programinstance.dateofincident,programinstance.enrollmentdate FROM programinstance INNER JOIN patient "
+ " ON programinstance.patientid = patient.patientid "
+ " WHERE patient.organisationunitid = "
+ orgUnit.getId()
+ " AND programinstance.programid = "
+ selProgram.getId()
+ " AND patient.registrationdate >= '"
+ startDate
+ "'"
+ " AND patient.registrationdate <= '"
+ endDate
+ "' "
+ " AND enddate IS NULL";
} else {
query =
"SELECT patient.patientid, programinstance.programinstanceid,programinstance.dateofincident,programinstance.enrollmentdate FROM programinstance INNER JOIN patient "
+ " ON programinstance.patientid = patient.patientid "
+ " WHERE patient.organisationunitid = "
+ orgUnit.getId()
+ " AND programinstance.programid = "
+ selProgram.getId()
+ " AND enddate IS NULL";
}
SqlRowSet sqlResultSet = jdbcTemplate.queryForRowSet(query);
if (sqlResultSet != null) {
int count = 1;
String orgUnitBranch = "";
sqlResultSet.beforeFirst();
while (sqlResultSet.next()) {
colCount = colStart;
if (orgUnit.getParent() != null) {
orgUnitBranch = getOrgunitBranch(orgUnit.getParent());
} else {
orgUnitBranch = " ";
}
sheet0.addCell(new Label(colCount, rowCount, orgUnitBranch, getCellFormat2()));
colCount++;
sheet0.addCell(new Label(colCount, rowCount, orgUnit.getName(), getCellFormat2()));
colCount++;
int patientId = sqlResultSet.getInt(1);
int programInstanceId = sqlResultSet.getInt(2);
Date dateOfIncident = sqlResultSet.getDate(3);
Date dateOfEnrollment = sqlResultSet.getDate(4);
Patient patient = patientService.getPatient(patientId);
// Patient Identifier Details
for (PatientIdentifierType patientIdentifierType : patientIdentifierTypes) {
query =
"SELECT identifier from patientidentifier WHERE patientidentifiertypeid = "
+ patientIdentifierType.getId()
+ " AND patientid = "
+ patient.getId();
SqlRowSet sqlResultSet1 = jdbcTemplate.queryForRowSet(query);
if (sqlResultSet1 != null && sqlResultSet1.next()) {
String value = sqlResultSet1.getString(1);
if (value != null && !value.trim().equalsIgnoreCase("")) {
sheet0.addCell(new Label(colCount, rowCount, value, getCellFormat2()));
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat2()));
}
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat2()));
}
colCount++;
}
// Patient Properties
sheet0.addCell(
new Label(colCount, rowCount, patient.getId().toString(), getCellFormat2()));
colCount++;
sheet0.addCell(new Label(colCount, rowCount, patient.getFullName(), getCellFormat2()));
colCount++;
sheet0.addCell(
new Label(colCount, rowCount, patient.getTextGender(), getCellFormat2()));
colCount++;
sheet0.addCell(new Label(colCount, rowCount, patient.getAge(), getCellFormat2()));
colCount++;
sheet0.addCell(
new Label(
colCount,
rowCount,
simpleDateFormat.format(patient.getBirthDate()),
getCellFormat2()));
colCount++;
/**
* TODO BloodGroup is removed from Patient Object, so need to change this accordingly
*/
sheet0.addCell(
new Label(colCount, rowCount, "" /*patient.getBloodGroup()*/, getCellFormat2()));
colCount++;
sheet0.addCell(
new Label(
colCount,
rowCount,
simpleDateFormat.format(patient.getRegistrationDate()),
getCellFormat2()));
colCount++;
// Patient Attribute Values
for (PatientAttribute patientAttribute : patientAttributes) {
query =
"SELECT value from patientattributevalue WHERE patientid = "
+ patient.getId()
+ " AND patientattributeid = "
+ patientAttribute.getId();
SqlRowSet sqlResultSet1 = jdbcTemplate.queryForRowSet(query);
if (sqlResultSet1 != null && sqlResultSet1.next()) {
String value = sqlResultSet1.getString(1);
if (value != null && !value.trim().equalsIgnoreCase("")) {
sheet0.addCell(new Label(colCount, rowCount, value, getCellFormat2()));
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat2()));
}
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat2()));
}
colCount++;
}
// Program Enrollment Details
sheet0.addCell(
new Label(
colCount, rowCount, simpleDateFormat.format(dateOfIncident), getCellFormat2()));
colCount++;
sheet0.addCell(
new Label(
colCount,
rowCount,
simpleDateFormat.format(dateOfEnrollment),
getCellFormat2()));
colCount++;
// ProgramStage Values
for (ProgramStage programStage : programStages) {
query =
"SELECT programstageinstanceid,duedate,executiondate from programstageinstance "
+ " WHERE programinstanceid = "
+ programInstanceId
+ " AND programstageid = "
+ programStage.getId();
SqlRowSet sqlResultSet2 = jdbcTemplate.queryForRowSet(query);
Integer programStageInstanceId = 0;
if (sqlResultSet2 != null && sqlResultSet2.next()) {
programStageInstanceId = sqlResultSet2.getInt(1);
// ProgramStage DueDate and Execution Date
Date dueDate = sqlResultSet2.getDate(2);
Date exeDate = sqlResultSet2.getDate(3);
if (dueDate != null) {
String dueDateStr = simpleDateFormat.format(dueDate);
sheet0.addCell(new Label(colCount, rowCount, dueDateStr, getCellFormat3()));
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat3()));
}
colCount++;
if (exeDate != null) {
String exeDateStr = simpleDateFormat.format(exeDate);
sheet0.addCell(new Label(colCount, rowCount, exeDateStr, getCellFormat3()));
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat3()));
}
colCount++;
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat3()));
colCount++;
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat3()));
colCount++;
}
for (DataElement dataElement : programStageDataElementMap.get(programStage)) {
query =
"SELECT value from patientdatavalue WHERE programstageinstanceid = "
+ programStageInstanceId
+ " AND dataelementid = "
+ dataElement.getId();
// " AND organisationunitid = " + orgUnit.getId();
SqlRowSet sqlResultSet3 = jdbcTemplate.queryForRowSet(query);
if (sqlResultSet3 != null && sqlResultSet3.next()) {
String value = sqlResultSet3.getString(1);
if (dataElement.getType().equalsIgnoreCase(DataElement.VALUE_TYPE_BOOL)) {
if (value.equalsIgnoreCase("false")) value = "No";
else value = "Yes";
}
if (value != null && !value.trim().equalsIgnoreCase("")) {
sheet0.addCell(new Label(colCount, rowCount, value, getCellFormat2()));
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat2()));
}
} else {
sheet0.addCell(new Label(colCount, rowCount, "-", getCellFormat2()));
}
colCount++;
}
}
rowCount++;
}
}
}
} catch (Exception e) {
System.out.println("Exception: " + e.getMessage());
e.printStackTrace();
}
outputReportWorkbook.write();
outputReportWorkbook.close();
fileName = selProgram.getName() + ".xls";
File outputReportFile = new File(outputReportPath);
inputStream = new BufferedInputStream(new FileInputStream(outputReportFile));
outputReportFile.deleteOnExit();
}
