/* */ public Source getContent() throws SOAPException {
/* 193 */ if (this.source != null) {
/* 194 */ InputStream bis = null;
/* 195 */ if ((this.source instanceof JAXMStreamSource)) {
/* 196 */ StreamSource streamSource = (StreamSource) this.source;
/* 197 */ bis = streamSource.getInputStream();
/* 198 */ } else if (FastInfosetReflection.isFastInfosetSource(this.source))
/* */ {
/* 200 */ SAXSource saxSource = (SAXSource) this.source;
/* 201 */ bis = saxSource.getInputSource().getByteStream();
/* */ }
/* */
/* 204 */ if (bis != null) {
/* */ try {
/* 206 */ bis.reset();
/* */ }
/* */ catch (IOException e)
/* */ {
/* */ }
/* */
/* */ }
/* */
/* 217 */ return this.source;
/* */ }
/* */
/* 220 */ return ((Envelope) getEnvelope()).getContent();
/* */ }
private String getStringFromStreamSource(StreamSource src, int length) throws Exception {
byte buf[] = null;
if (src == null) return null;
InputStream outStr = src.getInputStream();
if (outStr != null) {
int len = outStr.available();
if (outStr.markSupported()) outStr.reset();
buf = new byte[len];
outStr.read(buf, 0, len);
// System.out.println("From inputstream: "+new String(buf));
return new String(buf);
} else {
char buf1[] = new char[length];
Reader r = src.getReader();
if (r == null) return null;
r.reset();
r.read(buf1);
// System.out.println("From Reader: "+new String(buf));
return new String(buf1);
}
}
public void writeAsAttachment(Object obj, OutputStream out) throws IOException {
try {
if (obj instanceof StreamSource) {
StreamSource source = (StreamSource) obj;
InputSource inputSource = null;
InputStream is = source.getInputStream();
Reader reader = source.getReader();
String systemId = source.getSystemId();
if (is != null) inputSource = new InputSource(is);
else if (reader != null) inputSource = new InputSource(reader);
else if (systemId != null) inputSource = new InputSource(systemId);
XMLReader xmlReader = XMLReaderFactory.createXMLReader();
xmlReader.setEntityResolver(_entityResolver);
SAXSource saxSource = new SAXSource(xmlReader, inputSource);
_transformer.transform(saxSource, new StreamResult(out));
} else _transformer.transform((Source) obj, new StreamResult(out));
} catch (TransformerException e) {
IOException ioe = new IOException();
ioe.initCause(e);
throw ioe;
} catch (SAXException saxe) {
IOException ioe = new IOException();
ioe.initCause(saxe);
throw ioe;
}
}
public <T> JAXBElement<T> unmarshal(Source source, Class<T> tClass) throws JAXBException {
if (!(source instanceof StreamSource))
throw new UnsupportedOperationException(Messages.MESSAGES.expectingStreamSource());
StreamSource stream = (StreamSource) source;
XMLStreamReader reader = getBadgerFishReader(new InputStreamReader(stream.getInputStream()));
return unmarshal(reader, tClass);
}
/**
* Apply an XSLT transform to the current XML object in this transaction.
*
* @throws IllegalStateException if the current root object is null
* @throws PersistentObjectException if an error occurs
* @throws TransformerException if the transformation fails
*/
public void transform(Transformer transformer) throws TransformerException {
// Sanity check
if (this.current == null) throw new PersistentObjectException("no data to transform");
// Debug
// System.out.println("************************** BEFORE TRANSFORM");
// System.out.println(this.current);
// Set up source and result
StreamSource source = new StreamSource(new StringReader(this.current));
source.setSystemId(this.systemId);
StringWriter buffer = new StringWriter(BUFFER_SIZE);
StreamResult result = new StreamResult(buffer);
result.setSystemId(this.systemId);
// Apply transform
transformer.transform(source, result);
// Save result as the new current value
this.current = buffer.toString();
// Debug
// System.out.println("************************** AFTER TRANSFORM");
// System.out.println(this.current);
}
private static InputSource streamSourceToInputSource(StreamSource ss) {
InputSource is = new InputSource();
is.setSystemId(ss.getSystemId());
is.setByteStream(ss.getInputStream());
is.setCharacterStream(ss.getReader());
return is;
}
/**
* Returns a stream of XML markup.
*
* @return A stream of XML markup.
* @throws IOException
*/
public javax.xml.transform.stream.StreamSource getStreamSource() throws IOException {
final javax.xml.transform.stream.StreamSource result =
new javax.xml.transform.stream.StreamSource(getStream());
if (getLocationRef() != null) {
result.setSystemId(getLocationRef().getTargetRef().toString());
}
return result;
}
@Override
protected Object unmarshalStreamSource(StreamSource streamSource)
throws XmlMappingException, IOException {
if (streamSource.getInputStream() != null) {
return unmarshalInputStream(streamSource.getInputStream());
} else if (streamSource.getReader() != null) {
return unmarshalReader(streamSource.getReader());
} else {
throw new IllegalArgumentException("StreamSource contains neither InputStream nor Reader");
}
}
public DefaultJaxpStreamSource(Source source) {
this.source = source;
this.key = DefaultKey.newInstance();
if (source instanceof javax.xml.transform.stream.StreamSource) {
javax.xml.transform.stream.StreamSource stream =
(javax.xml.transform.stream.StreamSource) source;
this.systemId = stream.getSystemId() == null ? key.toString() : stream.getSystemId();
} else {
this.systemId = key.toString();
}
this.charset = null;
}
@Override
public TypeDescriptor scanFile(Store store, StreamSource streamSource) throws IOException {
DescriptorResolverFactory resolverFactory = new DescriptorResolverFactory(store);
ClassVisitor visitor = new ClassVisitor(new VisitorHelper(store, resolverFactory));
new ClassReader(streamSource.getInputStream()).accept(visitor, 0);
TypeDescriptor typeDescriptor = visitor.getTypeDescriptor();
scannedClasses++;
return typeDescriptor;
}
public static void closeSource(final Source source) {
if (!(source instanceof StreamSource)) {
return;
}
StreamSource stream = (StreamSource) source;
try {
if (stream.getInputStream() != null) {
stream.getInputStream().close();
}
} catch (IOException e) {
}
try {
if (stream.getReader() != null) {
stream.getReader().close();
}
} catch (IOException e) {
}
}
public SourceDataSource(String name, String contentType, StreamSource data) {
this.name = name;
this.contentType = contentType == null ? CONTENT_TYPE : contentType;
os = new ByteArrayOutputStream();
try {
if (data != null) {
// Try the Reader first
Reader reader = data.getReader();
if (reader != null) {
reader = new BufferedReader(reader);
int ch;
while ((ch = reader.read()) != -1) {
os.write(ch);
}
} else {
// Try the InputStream
InputStream is = data.getInputStream();
if (is == null) {
// Try the URL
String id = data.getSystemId();
if (id != null) {
URL url = new URL(id);
is = url.openStream();
}
}
if (is != null) {
is = new BufferedInputStream(is);
// If reading from a socket or URL, we could get a partial read.
byte[] bytes = null;
int avail;
while ((avail = is.available()) > 0) {
if (bytes == null || avail > bytes.length) bytes = new byte[avail];
is.read(bytes, 0, avail);
os.write(bytes, 0, avail);
}
}
}
}
} catch (Exception e) {
// Is this sufficient?
}
} // ctor
/** Opens a path based on a Source. */
ReadStream openPath(Source source) throws TransformerException, IOException {
String systemId = source.getSystemId();
Path path;
if (systemId != null) path = getSearchPath().lookup(systemId);
else path = getSearchPath().lookup("anonymous.xsl");
if (source instanceof StreamSource) {
StreamSource stream = (StreamSource) source;
InputStream is = stream.getInputStream();
if (is instanceof ReadStream) {
ReadStream rs = (ReadStream) is;
rs.setPath(path);
return rs;
} else if (is != null) {
ReadStream rs = Vfs.openRead(is);
rs.setPath(path);
return rs;
}
Reader reader = stream.getReader();
if (reader != null) {
ReadStream rs = Vfs.openRead(reader);
rs.setPath(path);
return rs;
}
}
if (systemId != null) return getSearchPath().lookup(systemId).openRead();
throw new TransformerException("bad source " + source);
}
public String write(Object in) throws IOException, JAXBException {
Source src = (Source) in;
try {
ByteArrayOutputStream out = new ByteArrayOutputStream();
_transformer.transform(src, new StreamResult(out));
return Base64.encodeFromByteArray(out.toByteArray());
} catch (TransformerException e) {
if (src instanceof StreamSource) {
StreamSource ss = (StreamSource) src;
InputStream is = ss.getInputStream();
if (is != null) {
ByteArrayOutputStream out = new ByteArrayOutputStream();
for (int ch = is.read(); ch >= 0; ch = is.read()) out.write(ch);
return Base64.encodeFromByteArray(out.toByteArray());
}
Reader reader = ss.getReader();
if (reader != null) {
CharArrayWriter out = new CharArrayWriter();
for (int ch = reader.read(); ch >= 0; ch = reader.read()) out.write(ch);
return Base64.encode(new String(out.toCharArray()));
}
}
throw new JAXBException(e);
}
}
public void writeDoc() throws Exception {
if (!isReadOnly && !getValue("readOnly").equalsIgnoreCase("true")) {
final InputStream stylesheet =
this.getClass().getResourceAsStream("/org/jpedal/examples/viewer/res/xmlstyle.xslt");
final StreamResult str = new StreamResult(configFile);
final StreamSource ss = new StreamSource(stylesheet);
final DOMSource dom = new DOMSource(doc);
final TransformerFactory transformerFactory = TransformerFactory.newInstance();
final Transformer transformer = transformerFactory.newTransformer(ss);
transformer.transform(dom, str);
stylesheet.close();
if (ss != null) {
ss.getInputStream().close();
}
// Prevents exception when viewer is closing.
if (str != null && str.getOutputStream() != null) {
str.getOutputStream().close();
}
}
}
/**
* This method is responsible for saving a macro as an XML document. The document follows the
* structure of the macro tree.
*/
public static void saveMacro(final MacroDefinition macroDef, final String saveLocation)
throws NullPointerException, IOException, ParserConfigurationException, DOMException,
TransformerConfigurationException, TransformerException {
MacroWriter.macro = macroDef;
File macroFile = null;
if (saveLocation.equals("")) {
// test if macro save location exists
File macroSaveLocation = new File(MacroManager.macroSaveLocation);
if (!macroSaveLocation.exists()) macroSaveLocation.mkdir();
String macroPath = MacroManager.macroSaveLocation + MacroWriter.macro.getName() + ".xml";
macroFile = new File(macroPath);
} else {
macroFile = new File(saveLocation);
}
Document ptDOM = null;
StreamSource xsltSource = null;
Transformer transformer = null;
try {
// Build a PTML Document
DocumentBuilderFactory builderFactory = DocumentBuilderFactory.newInstance();
DocumentBuilder builder = builderFactory.newDocumentBuilder();
ptDOM = builder.newDocument();
// PTML Element
Element ptmlElement = ptDOM.createElement("ptml");
ptDOM.appendChild(ptmlElement);
// Macro Element
Element macroElement = ptDOM.createElement("macro");
macroElement.setAttribute("name", MacroWriter.macro.getName());
macroElement.setAttribute("description", MacroWriter.macro.getDescription());
macroElement.setAttribute("returntype", MacroWriter.macro.getReturnType());
ptmlElement.appendChild(macroElement);
// put nodes into HashMap, so that we can check whether they have
// been processed already
// (in case of recursion when child nodes are processed)
ArrayList<PerformanceTreeNode> nodesArray = MacroWriter.macro.getMacroNodes();
Iterator<PerformanceTreeNode> i = nodesArray.iterator();
while (i.hasNext()) {
PerformanceTreeNode nodeNotProcessedYet = i.next();
String nodeID = nodeNotProcessedYet.getId();
MacroWriter.nodesProcessed.put(nodeID, "false");
}
// serialise node and their arcs
i = nodesArray.iterator();
while (i.hasNext()) {
PerformanceTreeNode nodeToSerialise = i.next();
String nodeToSerialiseID = nodeToSerialise.getId();
boolean nodeProcessedAlready = false;
if ((MacroWriter.nodesProcessed.get(nodeToSerialiseID)).equals("true")) {
nodeProcessedAlready = true;
} else if ((MacroWriter.nodesProcessed.get(nodeToSerialiseID)).equals("false")) {
nodeProcessedAlready = false;
}
if (!nodeProcessedAlready)
MacroWriter.createNodeElement(nodeToSerialise, macroElement, ptDOM);
}
// serialise state and action labels
MacroWriter.serialiseStateAndActionLabels(macroElement, ptDOM);
ptDOM.normalize();
// Create Transformer with XSL Source File
xsltSource =
new StreamSource(
Thread.currentThread()
.getContextClassLoader()
.getResourceAsStream(
"pipe"
+ System.getProperty("file.separator")
+ "modules"
+ System.getProperty("file.separator")
+ "queryeditor"
+ System.getProperty("file.separator")
+ "io"
+ System.getProperty("file.separator")
+ "WriteMacroXML.xsl"));
transformer = TransformerFactory.newInstance().newTransformer(xsltSource);
// Write file and do XSLT transformation to generate correct PTML
File outputObjectArrayList = macroFile;
DOMSource source = new DOMSource(ptDOM);
StreamResult result = new StreamResult(outputObjectArrayList);
transformer.transform(source, result);
} catch (DOMException e) {
System.out.println(
"DOMException thrown in saveMacro()"
+ " : MacroWriter Class : modules.queryeditor.io Package"
+ " : filename=\""
+ macroFile.getCanonicalPath()
+ "\" xslt=\""
+ xsltSource.getSystemId()
+ "\" transformer=\""
+ transformer.getURIResolver()
+ "\"");
} catch (ParserConfigurationException e) {
System.out.println(
"ParserConfigurationException thrown in saveMacro()"
+ " : MacroWriter Class : modules.queryeditor.io Package"
+ " : filename=\""
+ macroFile.getCanonicalPath()
+ "\" xslt=\""
+ "\" transformer=\""
+ "\"");
} catch (TransformerConfigurationException e) {
System.out.println(
"TransformerConfigurationException thrown in saveMacro()"
+ " : MacroWriter Class : modules.queryeditor.io Package"
+ " : filename=\""
+ macroFile.getCanonicalPath()
+ "\" xslt=\""
+ xsltSource.getSystemId()
+ "\" transformer=\""
+ transformer.getURIResolver()
+ "\"");
} catch (TransformerException e) {
System.out.println(
"TransformerException thrown in saveMacro()"
+ " : MacroWriter Class : modules.queryeditor.io Package"
+ " : filename=\""
+ macroFile.getCanonicalPath()
+ "\" xslt=\""
+ xsltSource.getSystemId()
+ "\" transformer=\""
+ transformer.getURIResolver()
+ "\"");
}
}
/**
* Creates a proper {@link XMLInputSource} from a {@link StreamSource}.
*
* @return always return non-null valid object.
*/
public static final XMLInputSource toXMLInputSource(StreamSource in) {
if (in.getReader() != null)
return new XMLInputSource(
in.getPublicId(), in.getSystemId(), in.getSystemId(), in.getReader(), null);
if (in.getInputStream() != null)
return new XMLInputSource(
in.getPublicId(), in.getSystemId(), in.getSystemId(), in.getInputStream(), null);
return new XMLInputSource(in.getPublicId(), in.getSystemId(), in.getSystemId());
}
public void doRequest(HttpServletRequest req, HttpServletResponse res, WebUser user)
throws ServletException, IOException {
res.setContentType("text/html");
PrintWriter out = res.getWriter();
Document doc = null;
try {
doc = DocumentBuilderFactory.newInstance().newDocumentBuilder().newDocument();
} catch (ParserConfigurationException pce) {
out.println("Parser Configuration Exception: " + pce.getMessage());
out.println("<!--");
pce.printStackTrace(out);
out.println("-->");
}
// Make sure this person is authorized
if (!Util.isAuthorized(user.getUserID())) {
res.setContentType("text/html");
out.println("<title>JELlY</title>");
out.println(
"You are not authorized to use Jelly. Please talk to Brian Samson if"
+ "you believe this message is in error");
return;
}
if (req.getParameter("action") == null) {
// main page, show list of modules
Element projects = doc.createElement("projects");
List projectList = Configuration.getInstance().getJellyConfiguration().getProject();
for (Iterator i = projectList.iterator(); i.hasNext(); ) {
ProjectType project = (ProjectType) i.next();
Element projectElement = doc.createElement("project");
projectElement.setAttribute("name", project.getName());
projects.appendChild(projectElement);
}
doc.appendChild(projects);
} else if (req.getParameter("action").equals("selectproject")) {
String project = req.getParameter("project");
Element optionsPage = doc.createElement("optionsPage");
Element projectElement = doc.createElement("project");
projectElement.setAttribute("name", project);
optionsPage.appendChild(projectElement);
ServiceFactory serviceFactory = ServiceFactory.getInstance();
ISource source = serviceFactory.getSource(project);
Element sourceElement = doc.createElement("source");
sourceElement.setAttribute("class", source.getClass().getName());
sourceElement.appendChild(getOptions(source, project, doc));
optionsPage.appendChild(sourceElement);
IBuilder builder = serviceFactory.getBuilder(project);
Element builderElement = doc.createElement("builder");
builderElement.setAttribute("class", builder.getClass().getName());
builderElement.appendChild(getOptions(builder, project, doc));
optionsPage.appendChild(builderElement);
IDeployer deployer = serviceFactory.getDeployer(project);
Element deployerElement = doc.createElement("deployer");
deployerElement.setAttribute("class", deployer.getClass().getName());
deployerElement.appendChild(getOptions(deployer, project, doc));
optionsPage.appendChild(deployerElement);
doc.appendChild(optionsPage);
} else if (req.getParameter("action").equals("go")) {
String project = req.getParameter("project");
ServiceFactory serviceFactory = ServiceFactory.getInstance();
String sourceDir = "/tmp/jelly." + project + "/src";
String destDir = "/tmp/jelly." + project + "/dest";
try {
Element go = doc.createElement("go");
ISource source = serviceFactory.getSource(project);
Map options = getOptions("source", req);
source.retrieveSource(project, sourceDir, options);
IBuilder builder = serviceFactory.getBuilder(project);
options = getOptions("builder", req);
String buildOutput =
builder.build(project, sourceDir + File.separator + project, destDir, options);
Element build = doc.createElement("build");
build.appendChild(doc.createTextNode(buildOutput));
go.appendChild(build);
IDeployer deployer = serviceFactory.getDeployer(project);
options = getOptions("deployer", req);
deployer.deploy(destDir, IDeployer.ENV_QA);
doc.appendChild(go);
} catch (SourceException e) {
Element error = doc.createElement("error");
error.setAttribute("message", e.getMessage());
doc.appendChild(error);
}
}
try {
URL url = this.getClass().getResource("/edu/asu/wmac/jelly/servlets/jelly.xsl");
StreamSource stylesheet = new StreamSource(url.openConnection().getInputStream());
stylesheet.setSystemId(url.toString());
Transformer trans = TransformerFactory.newInstance().newTransformer(stylesheet);
trans.setParameter("requestURL", req.getRequestURI());
trans.transform(new DOMSource(doc), new StreamResult(out));
} catch (TransformerException tce) {
out.println("Transformer exception: " + tce.getMessage());
out.println("<!--");
tce.printStackTrace(out);
out.println("-->");
}
}
protected Document getXmlDocument(final FacesContext context, UIComponent component, Object value)
throws ParserConfigurationException, SAXException, IOException {
if (value == null) {
return null;
}
Document document;
// First of all detect pre-built doms
if (value instanceof Document) {
document = (Document) value;
} else if (value instanceof DOMSource) {
final DOMSource source = (DOMSource) value;
final DocumentBuilder builder = getDocumentBuilder();
document = builder.newDocument();
document.appendChild(source.getNode());
} else if ((value instanceof InputSource) || (value instanceof SAXSource)) {
InputSource inputSource;
if (value instanceof SAXSource) {
final SAXSource source = (SAXSource) value;
inputSource = source.getInputSource();
} else {
inputSource = (InputSource) value;
}
final DocumentBuilder builder = getDocumentBuilder();
document = builder.parse(inputSource);
} else {
InputStream stream = null;
boolean closeStream = true;
if (value instanceof StreamSource) {
final StreamSource source = (StreamSource) value;
stream = source.getInputStream();
} else if (value instanceof File) {
stream = new FileInputStream((File) value);
} else if (value instanceof URL) {
stream = ((URL) value).openStream();
} else if (value instanceof String) {
final JRFacesContext jrContext = JRFacesContext.getInstance(context);
final Resource resource = jrContext.createResource(context, component, (String) value);
stream = resource.getInputStream();
} else if (value instanceof InputStream) {
stream = (InputStream) value;
closeStream = false;
}
if (stream == null) {
throw new SourceException(
"Unrecognized XML " + "value source type: " + value.getClass().getName());
}
try {
final DocumentBuilder builder = getDocumentBuilder();
document = builder.parse(stream);
} finally {
if (stream != null && closeStream) {
try {
stream.close();
} catch (final IOException e) {;
}
}
stream = null;
}
}
return document;
}
public void validate(Source source, Result result) throws SAXException, IOException {
if (result instanceof StreamResult || result == null) {
final StreamSource streamSource = (StreamSource) source;
final StreamResult streamResult = (StreamResult) result;
XMLInputSource input =
new XMLInputSource(streamSource.getPublicId(), streamSource.getSystemId(), null);
input.setByteStream(streamSource.getInputStream());
input.setCharacterStream(streamSource.getReader());
// Gets the parser configuration. We'll create and initialize a new one, if we
// haven't created one before or if the previous one was garbage collected.
boolean newConfig = false;
XMLParserConfiguration config = (XMLParserConfiguration) fConfiguration.get();
if (config == null) {
config = initialize();
newConfig = true;
}
// If settings have changed on the component manager, refresh the error handler and entity
// resolver.
else if (fComponentManager.getFeature(PARSER_SETTINGS)) {
config.setProperty(ENTITY_RESOLVER, fComponentManager.getProperty(ENTITY_RESOLVER));
config.setProperty(ERROR_HANDLER, fComponentManager.getProperty(ERROR_HANDLER));
config.setProperty(SECURITY_MANAGER, fComponentManager.getProperty(SECURITY_MANAGER));
}
// prepare for parse
fComponentManager.reset();
if (streamResult != null) {
if (fSerializerFactory == null) {
fSerializerFactory = SerializerFactory.getSerializerFactory(Method.XML);
}
// there doesn't seem to be a way to reset a serializer, so we need to make
// a new one each time.
Serializer ser;
if (streamResult.getWriter() != null) {
ser = fSerializerFactory.makeSerializer(streamResult.getWriter(), new OutputFormat());
} else if (streamResult.getOutputStream() != null) {
ser =
fSerializerFactory.makeSerializer(streamResult.getOutputStream(), new OutputFormat());
} else if (streamResult.getSystemId() != null) {
String uri = streamResult.getSystemId();
OutputStream out = XMLEntityManager.createOutputStream(uri);
ser = fSerializerFactory.makeSerializer(out, new OutputFormat());
} else {
throw new IllegalArgumentException(
JAXPValidationMessageFormatter.formatMessage(
fComponentManager.getLocale(), "StreamResultNotInitialized", null));
}
// we're using the parser only as an XNI-to-SAX converter,
// so that we can use the SAX-based serializer
SAXParser parser = (SAXParser) fParser.get();
if (newConfig || parser == null) {
parser = new SAXParser(config);
fParser = new SoftReference(parser);
} else {
parser.reset();
}
config.setDocumentHandler(fSchemaValidator);
fSchemaValidator.setDocumentHandler(parser);
parser.setContentHandler(ser.asContentHandler());
} else {
fSchemaValidator.setDocumentHandler(null);
}
try {
config.parse(input);
} catch (XMLParseException e) {
throw Util.toSAXParseException(e);
} catch (XNIException e) {
throw Util.toSAXException(e);
} finally {
// release the references to the SAXParser and Serializer
fSchemaValidator.setDocumentHandler(null);
}
return;
}
throw new IllegalArgumentException(
JAXPValidationMessageFormatter.formatMessage(
fComponentManager.getLocale(),
"SourceResultMismatch",
new Object[] {source.getClass().getName(), result.getClass().getName()}));
}
/** Creates a SAX2 InputSource object from a TrAX Source object */
public static InputSource getInputSource(XSLTC xsltc, Source source)
throws TransformerConfigurationException {
InputSource input = null;
String systemId = source.getSystemId();
try {
// Try to get InputSource from SAXSource input
if (source instanceof SAXSource) {
final SAXSource sax = (SAXSource) source;
input = sax.getInputSource();
// Pass the SAX parser to the compiler
try {
XMLReader reader = sax.getXMLReader();
/*
* Fix for bug 24695
* According to JAXP 1.2 specification if a SAXSource
* is created using a SAX InputSource the Transformer or
* TransformerFactory creates a reader via the
* XMLReaderFactory if setXMLReader is not used
*/
if (reader == null) {
try {
reader = XMLReaderFactory.createXMLReader();
} catch (Exception e) {
try {
// Incase there is an exception thrown
// resort to JAXP
SAXParserFactory parserFactory = SAXParserFactory.newInstance();
parserFactory.setNamespaceAware(true);
if (xsltc.isSecureProcessing()) {
try {
parserFactory.setFeature(XMLConstants.FEATURE_SECURE_PROCESSING, true);
} catch (org.xml.sax.SAXException se) {
}
}
reader = parserFactory.newSAXParser().getXMLReader();
} catch (ParserConfigurationException pce) {
throw new TransformerConfigurationException("ParserConfigurationException", pce);
}
}
}
reader.setFeature("http://xml.org/sax/features/namespaces", true);
reader.setFeature("http://xml.org/sax/features/namespace-prefixes", false);
xsltc.setXMLReader(reader);
} catch (SAXNotRecognizedException snre) {
throw new TransformerConfigurationException("SAXNotRecognizedException ", snre);
} catch (SAXNotSupportedException snse) {
throw new TransformerConfigurationException("SAXNotSupportedException ", snse);
} catch (SAXException se) {
throw new TransformerConfigurationException("SAXException ", se);
}
}
// handle DOMSource
else if (source instanceof DOMSource) {
final DOMSource domsrc = (DOMSource) source;
final Document dom = (Document) domsrc.getNode();
final DOM2SAX dom2sax = new DOM2SAX(dom);
xsltc.setXMLReader(dom2sax);
// Try to get SAX InputSource from DOM Source.
input = SAXSource.sourceToInputSource(source);
if (input == null) {
input = new InputSource(domsrc.getSystemId());
}
}
// Try to get InputStream or Reader from StreamSource
else if (source instanceof StreamSource) {
final StreamSource stream = (StreamSource) source;
final InputStream istream = stream.getInputStream();
final Reader reader = stream.getReader();
xsltc.setXMLReader(null); // Clear old XML reader
// Create InputSource from Reader or InputStream in Source
if (istream != null) {
input = new InputSource(istream);
} else if (reader != null) {
input = new InputSource(reader);
} else {
input = new InputSource(systemId);
}
} else {
ErrorMsg err = new ErrorMsg(ErrorMsg.JAXP_UNKNOWN_SOURCE_ERR);
throw new TransformerConfigurationException(err.toString());
}
input.setSystemId(systemId);
} catch (NullPointerException e) {
ErrorMsg err = new ErrorMsg(ErrorMsg.JAXP_NO_SOURCE_ERR, "TransformerFactory.newTemplates()");
throw new TransformerConfigurationException(err.toString());
} catch (SecurityException e) {
ErrorMsg err = new ErrorMsg(ErrorMsg.FILE_ACCESS_ERR, systemId);
throw new TransformerConfigurationException(err.toString());
}
return input;
}
private void validateSignature(SOAPMessage soapMessage) throws Exception {
MessageDigest md = MessageDigest.getInstance("SHA-256");
SOAPPart soapPart = soapMessage.getSOAPPart();
Source source = null;
try {
source = soapPart.getContent();
} catch (Exception e) {
}
Node root = null;
Document doc = null;
DocumentBuilder db = null;
if (source instanceof DOMSource) {
root = ((DOMSource) source).getNode();
if (root instanceof Document) {
doc = (Document) root;
}
} else if (source instanceof SAXSource) {
InputSource inSource = ((SAXSource) source).getInputSource();
DocumentBuilderFactory dbf = DocumentBuilderFactory.newInstance();
dbf.setNamespaceAware(true);
db = dbf.newDocumentBuilder();
doc = db.parse(inSource);
root = (Node) doc.getDocumentElement();
} else { // if (source instanceof JAXMStreamSource){
StreamSource streamSource = (StreamSource) source;
DocumentBuilderFactory dbf = DocumentBuilderFactory.newInstance();
dbf.setNamespaceAware(true);
db = dbf.newDocumentBuilder();
doc = db.parse(streamSource.getInputStream());
root = (Node) doc.getDocumentElement();
root = root.getParentNode();
}
/////////////////////////////////////////////
NodeList nl = doc.getElementsByTagNameNS(XMLSignature.XMLNS, "Signature");
if (nl.getLength() == 0) {
throw new Exception("Cannot find Signature element");
// System.out.println("Cannot find Signature element");
}
KeyValueKeySelector kvks = new KeyValueKeySelector();
DOMValidateContext valContext =
new DOMValidateContext(kvks, nl.item(0)); // (LoadPublicKey("", "RSA"),nl.item(0));
XMLSignatureFactory factory = XMLSignatureFactory.getInstance("DOM");
XMLSignature signature = factory.unmarshalXMLSignature(valContext);
if (signature.validate(valContext)) valid = 1;
else valid = 0;
if (DEBUG_) System.out.println("WSupdate:HS: valid=" + valid);
try {
md.update(signature.getKeySelectorResult().getKey().getEncoded());
String PK_WS = getHexString(md.digest());
if (PK_WS.equals(PK_Hex)) valid = 1;
else valid = 0;
if (DEBUG_)
System.out.println(
"Signature validation by comparing URL digest PK and empadded PK (1 or 0) " + valid);
if (DEBUG_) System.out.println("Public Key from SOAP: " + PK_WS);
md.reset();
if (DEBUG_) System.out.println("Public Key from DB: " + PK_Hex);
// md.update(LoadPublicKey("", "RSA").getEncoded());
// System.out.println("Public Key from File: " + getHexString(md.digest()));
} catch (Exception e) {
System.out.print(e);
}
// PublicKey pub = keypair.getPublic();
/////////////////////////////////////////////
// Element envelope = getFirstChildElement(root);
// Element header = getFirstChildElement(envelope);
// Element sigElement = getFirstChildElement(header);
// DOMValidateContext valContext = new DOMValidateContext(LoadPublicKey("","RSA"),
// sigElement);
// valContext.setIdAttributeNS(getNextSiblingElement(header),
// "http://schemas.xmlsoap.org/soap/security/2000-12", "id");
// if(sig.validate(valContext)) valid=1 ; else valid=0;
////////////////////////////////////////////
}
public Schema newSchema(Source[] schemas) throws SAXException {
// this will let the loader store parsed Grammars into the pool.
XMLGrammarPoolImplExtension pool = new XMLGrammarPoolImplExtension();
fXMLGrammarPoolWrapper.setGrammarPool(pool);
XMLInputSource[] xmlInputSources = new XMLInputSource[schemas.length];
InputStream inputStream;
Reader reader;
for (int i = 0; i < schemas.length; i++) {
Source source = schemas[i];
if (source instanceof StreamSource) {
StreamSource streamSource = (StreamSource) source;
String publicId = streamSource.getPublicId();
String systemId = streamSource.getSystemId();
inputStream = streamSource.getInputStream();
reader = streamSource.getReader();
xmlInputSources[i] = new XMLInputSource(publicId, systemId, null);
xmlInputSources[i].setByteStream(inputStream);
xmlInputSources[i].setCharacterStream(reader);
} else if (source instanceof SAXSource) {
SAXSource saxSource = (SAXSource) source;
InputSource inputSource = saxSource.getInputSource();
if (inputSource == null) {
throw new SAXException(
JAXPValidationMessageFormatter.formatMessage(
Locale.getDefault(), "SAXSourceNullInputSource", null));
}
xmlInputSources[i] = new SAXInputSource(saxSource.getXMLReader(), inputSource);
} else if (source instanceof DOMSource) {
DOMSource domSource = (DOMSource) source;
Node node = domSource.getNode();
String systemID = domSource.getSystemId();
xmlInputSources[i] = new DOMInputSource(node, systemID);
} else if (source == null) {
throw new NullPointerException(
JAXPValidationMessageFormatter.formatMessage(
Locale.getDefault(), "SchemaSourceArrayMemberNull", null));
} else {
throw new IllegalArgumentException(
JAXPValidationMessageFormatter.formatMessage(
Locale.getDefault(),
"SchemaFactorySourceUnrecognized",
new Object[] {source.getClass().getName()}));
}
}
try {
fXMLSchemaLoader.loadGrammar(xmlInputSources);
} catch (XNIException e) {
// this should have been reported to users already.
throw Util.toSAXException(e);
} catch (IOException e) {
// this hasn't been reported, so do so now.
SAXParseException se = new SAXParseException(e.getMessage(), null, e);
fErrorHandler.error(se);
throw se; // and we must throw it.
}
// Clear reference to grammar pool.
fXMLGrammarPoolWrapper.setGrammarPool(null);
// Select Schema implementation based on grammar count.
final int grammarCount = pool.getGrammarCount();
if (grammarCount > 1) {
return new XMLSchema(new ReadOnlyGrammarPool(pool));
} else if (grammarCount == 1) {
Grammar[] grammars = pool.retrieveInitialGrammarSet(XMLGrammarDescription.XML_SCHEMA);
return new SimpleXMLSchema(grammars[0]);
} else {
return EmptyXMLSchema.getInstance();
}
}
/**
* @throws org.exist.xquery.XPathException
* @see BasicFunction#eval(Sequence[], Sequence)
*/
public Sequence eval(Sequence[] args, Sequence contextSequence) throws XPathException {
// Check input parameters
if (args.length != 2) {
return Sequence.EMPTY_SEQUENCE;
}
ValidationReport report = new ValidationReport();
StreamSource instance = null;
StreamSource grammars[] = null;
try {
report.start();
// Get inputstream for instance document
instance = Shared.getStreamSource(args[0].itemAt(0), context);
// Validate using resource speciefied in second parameter
grammars = Shared.getStreamSource(args[1], context);
for (StreamSource grammar : grammars) {
String grammarUrl = grammar.getSystemId();
if (grammarUrl != null && !grammarUrl.endsWith(".xsd")) {
throw new XPathException("Only XML schemas (.xsd) are supported.");
}
}
// Prepare
String schemaLang = XMLConstants.W3C_XML_SCHEMA_NS_URI;
SchemaFactory factory = SchemaFactory.newInstance(schemaLang);
// Create grammar
Schema schema = factory.newSchema(grammars);
// Setup validator
Validator validator = schema.newValidator();
validator.setErrorHandler(report);
// Perform validation
validator.validate(instance);
} catch (MalformedURLException ex) {
LOG.error(ex.getMessage());
report.setException(ex);
} catch (ExistIOException ex) {
LOG.error(ex.getCause());
report.setException(ex);
} catch (Throwable ex) {
LOG.error(ex);
report.setException(ex);
} finally {
report.stop();
Shared.closeStreamSource(instance);
Shared.closeStreamSources(grammars);
}
// Create response
if (isCalledAs("jaxv")) {
Sequence result = new ValueSequence();
result.add(new BooleanValue(report.isValid()));
return result;
} else /* isCalledAs("jaxv-report") */ {
MemTreeBuilder builder = context.getDocumentBuilder();
NodeImpl result = Shared.writeReport(report, builder);
return result;
}
}
private Map getPropertiesFromJSON() throws JAXBException {
Map props = new HashMap(getProperties());
if (props != null) {
Object bindingFilesObject = props.get(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY);
if (bindingFilesObject != null) {
JAXBContext jaxbContext = CompilerHelper.getXmlBindingsModelContext();
// unmarshal XML
Unmarshaller u = jaxbContext.createUnmarshaller();
Marshaller jsonMarshaller = jaxbContext.createMarshaller();
// Marshal bindings to JSON (with no root)
jsonMarshaller.setProperty(MarshallerProperties.MEDIA_TYPE, "application/json");
jsonMarshaller.setProperty(MarshallerProperties.JSON_INCLUDE_ROOT, false);
if (bindingFilesObject instanceof Map) {
Map<String, Object> bindingFiles = (Map<String, Object>) bindingFilesObject;
Iterator<String> keyIter = bindingFiles.keySet().iterator();
while (keyIter.hasNext()) {
String nextKey = keyIter.next();
Object nextBindings = bindingFiles.get(nextKey);
;
if (nextBindings instanceof List) {
List nextList = (List) bindingFiles.get(nextKey);
for (int i = 0; i < nextList.size(); i++) {
Object o = nextList.get(i);
if (o instanceof Source) {
Source nextSource = (Source) o;
if (nextSource instanceof StreamSource) {
StreamSource ss = (StreamSource) nextSource;
StreamSource ss2 = new StreamSource(ss.getInputStream());
Object unmarshalledFromXML = u.unmarshal(ss2);
StringWriter sw = new StringWriter();
StreamResult newResult = new StreamResult(sw);
jsonMarshaller.marshal(unmarshalledFromXML, newResult);
StreamSource newSource = new StreamSource(new StringReader(sw.toString()));
nextList.set(i, newSource);
}
}
}
} else if (nextBindings instanceof Source) {
Object unmarshalledFromXML = u.unmarshal((Source) nextBindings);
StringWriter sw = new StringWriter();
StreamResult newResult = new StreamResult(sw);
jsonMarshaller.marshal(unmarshalledFromXML, newResult);
StreamSource newSource = new StreamSource(new StringReader(sw.toString()));
bindingFiles.put(nextKey, newSource);
}
}
} else if (bindingFilesObject instanceof List) {
List bindingFilesList = (List) bindingFilesObject;
for (int i = 0; i < bindingFilesList.size(); i++) {
Object next = bindingFilesList.get(i);
Object unmarshalledFromXML = getXmlBindings(next);
StringWriter sw = new StringWriter();
StreamResult newResult = new StreamResult(sw);
jsonMarshaller.marshal(unmarshalledFromXML, newResult);
StreamSource newSource = new StreamSource(new StringReader(sw.toString()));
bindingFilesList.set(i, newSource);
}
props.put(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY, bindingFilesList);
} else {
Object unmarshalledFromXML = getXmlBindings(bindingFilesObject);
StringWriter sw = new StringWriter();
StreamResult newResult = new StreamResult(sw);
jsonMarshaller.marshal(unmarshalledFromXML, newResult);
StreamSource newSource = new StreamSource(new StringReader(sw.toString()));
props.put(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY, newSource);
}
}
}
return props;
}
public void apply(File xmlSourceDirectory, File targetDirectory, DocErrorReporter reporter)
throws DocTransletException {
PrintStream err = System.err;
try {
URL mainResourceURL =
classLoader == null
? ClassLoader.getSystemResource(mainResourceFilename)
: classLoader.getResource(mainResourceFilename);
if (null == mainResourceURL) {
throw new DocTransletException("Cannot find resource '" + mainResourceFilename + "'");
}
Map parameters = new HashMap();
parameters.put("gjdoc.xmldoclet.version", Driver.XMLDOCLET_VERSION);
parameters.put("gjdoc.option.nonavbar", xsltBoolean(options.nonavbar));
parameters.put("gjdoc.option.noindex", xsltBoolean(options.noindex));
parameters.put("gjdoc.option.notree", xsltBoolean(options.notree));
parameters.put("gjdoc.option.nocomment", xsltBoolean(options.nocomment));
parameters.put("gjdoc.option.nohelp", xsltBoolean(options.nohelp));
parameters.put("gjdoc.option.splitindex", xsltBoolean(options.splitindex));
parameters.put("gjdoc.option.linksource", xsltBoolean(options.linksource));
parameters.put("gjdoc.option.nodeprecatedlist", xsltBoolean(options.nodeprecatedlist));
parameters.put("gjdoc.option.uses", xsltBoolean(options.uses));
parameters.put("gjdoc.option.windowtitle", options.windowtitle);
parameters.put("gjdoc.option.helpfile", options.helpfile);
parameters.put("gjdoc.option.stylesheetfile", options.stylesheetfile);
parameters.put("gjdoc.option.header", options.header);
parameters.put("gjdoc.option.footer", options.footer);
parameters.put("gjdoc.option.bottom", options.bottom);
parameters.put("gjdoc.option.doctitle", options.doctitle);
List outputFileList = getOutputFileList(mainResourceURL, xmlSourceDirectory, parameters);
reporter.printNotice("Running DocTranslet...");
TransformerFactory transformerFactory = TransformerFactory.newInstance();
transformerFactory.setErrorListener(this);
boolean isLibxmlJ =
transformerFactory
.getClass()
.getName()
.equals("gnu.xml.libxmlj.transform.TransformerFactoryImpl");
for (Iterator it = outputFileList.iterator(); it.hasNext(); ) {
if (isLibxmlJ) {
System.gc();
Runtime.getRuntime().runFinalization();
}
OutputFileInfo fileInfo = (OutputFileInfo) it.next();
File targetFile = new File(targetDirectory, fileInfo.getName());
File packageTargetDir = getParentFile(targetFile);
if (!packageTargetDir.exists() && !packageTargetDir.mkdirs()) {
throw new DocTransletException(
"Target directory " + packageTargetDir + " does not exist and cannot be created.");
}
if (options.linksource) {
File sourceTargetDirectory = new File(targetDirectory, "src-html");
File sourceTargetFile = new File(sourceTargetDirectory, fileInfo.getName());
File sourcePackageTargetDir = getParentFile(sourceTargetFile);
if (!sourcePackageTargetDir.exists() && !sourcePackageTargetDir.mkdirs()) {
throw new DocTransletException(
"Target directory " + packageTargetDir + " does not exist and cannot be created.");
}
}
if (options.uses) {
File usesTargetDirectory = new File(targetDirectory, "class-use");
File usesTargetFile = new File(usesTargetDirectory, fileInfo.getName());
File usesPackageTargetDir = getParentFile(usesTargetFile);
if (!usesPackageTargetDir.exists() && !usesPackageTargetDir.mkdirs()) {
throw new DocTransletException(
"Target directory " + packageTargetDir + " does not exist and cannot be created.");
}
}
if (null != fileInfo.getSource()) {
reporter.printNotice("Copying " + fileInfo.getComment() + "...");
InputStream in = new URL(mainResourceURL, fileInfo.getSource()).openStream();
FileOutputStream out = new FileOutputStream(targetFile.getAbsolutePath());
IOToolkit.copyStream(in, out);
in.close();
out.close();
} else {
reporter.printNotice("Generating " + fileInfo.getComment() + "...");
String pathToRoot = "";
for (File file = getParentFile(targetFile);
!equalsFile(file, targetDirectory);
file = getParentFile(file)) {
pathToRoot += "../";
}
StreamResult out = new StreamResult(targetFile.getAbsolutePath());
StreamSource in =
new StreamSource(new File(xmlSourceDirectory, "index.xml").getAbsolutePath());
URL resource = new URL(mainResourceURL, fileInfo.getSheet());
StreamSource xsltSource = new StreamSource(resource.toExternalForm());
if (null != fileInfo.getInfo()) {
parameters.put("gjdoc.outputfile.info", fileInfo.getInfo());
}
parameters.put("gjdoc.pathtoroot", pathToRoot);
Transformer transformer;
transformer = (Transformer) transformerMap.get(xsltSource.getSystemId());
if (null == transformer) {
transformer = transformerFactory.newTransformer(xsltSource);
if (cacheXSLTSheets) {
transformerMap.put(xsltSource.getSystemId(), transformer);
}
}
transformer.clearParameters();
for (Iterator pit = parameters.keySet().iterator(); pit.hasNext(); ) {
String key = (String) pit.next();
String value = (String) parameters.get(key);
transformer.setParameter(key, value);
}
transformer.setErrorListener(this);
DocErrorReporterOutputStream errorReporterOut =
new DocErrorReporterOutputStream(reporter);
System.setErr(new PrintStream(errorReporterOut));
transformer.transform(in, out);
errorReporterOut.flush();
}
}
} catch (MalformedURLException e) {
throw new DocTransletException(e);
} catch (TransformerFactoryConfigurationError e) {
throw new DocTransletException(e);
} catch (TransformerException e) {
throw new DocTransletException(e.getMessageAndLocation(), e);
} catch (IOException e) {
throw new DocTransletException(e);
} finally {
System.setErr(err);
}
}
