/**
* Delete log segments whose contents have been turned into SSTables. NOT threadsafe.
*
* <p>param @ context The commitLog context . param @ id id of the columnFamily being flushed to
* disk.
*/
private void discardCompletedSegmentsInternal(
CommitLogSegment.CommitLogContext context, Integer id) throws IOException {
if (logger.isDebugEnabled())
logger.debug("discard completed log segments for " + context + ", column family " + id + ".");
/*
* log replay assumes that we only have to look at entries past the last
* flush position, so verify that this flush happens after the last. See CASSANDRA-936
*/
assert context.position >= context.getSegment().getHeader().getPosition(id)
: "discard at "
+ context
+ " is not after last flush at "
+ context.getSegment().getHeader().getPosition(id);
/*
* Loop through all the commit log files in the history. Now process
* all files that are older than the one in the context. For each of
* these files the header needs to modified by resetting the dirty
* bit corresponding to the flushed CF.
*/
Iterator<CommitLogSegment> iter = segments.iterator();
while (iter.hasNext()) {
CommitLogSegment segment = iter.next();
CommitLogHeader header = segment.getHeader();
if (segment.equals(context.getSegment())) {
// we can't just mark the segment where the flush happened clean,
// since there may have been writes to it between when the flush
// started and when it finished. so mark the flush position as
// the replay point for this CF, instead.
if (logger.isDebugEnabled())
logger.debug("Marking replay position " + context.position + " on commit log " + segment);
header.turnOn(id, context.position);
segment.writeHeader();
break;
}
header.turnOff(id);
if (header.isSafeToDelete()) {
logger.info("Discarding obsolete commit log:" + segment);
segment.close();
DeletionService.submitDelete(segment.getHeaderPath());
DeletionService.submitDelete(segment.getPath());
// usually this will be the first (remaining) segment, but not always, if segment A contains
// writes to a CF that is unflushed but is followed by segment B whose CFs are all flushed.
iter.remove();
} else {
if (logger.isDebugEnabled())
logger.debug(
"Not safe to delete commit log " + segment + "; dirty is " + header.dirtyString());
segment.writeHeader();
}
}
}
public static void recover() throws IOException {
String directory = DatabaseDescriptor.getCommitLogLocation();
File[] files =
new File(directory)
.listFiles(
new FilenameFilter() {
public boolean accept(File dir, String name) {
return CommitLogSegment.possibleCommitLogFile(name);
}
});
if (files.length == 0) return;
Arrays.sort(files, new FileUtils.FileComparator());
logger.info("Replaying " + StringUtils.join(files, ", "));
recover(files);
for (File f : files) {
FileUtils.delete(
CommitLogHeader.getHeaderPathFromSegmentPath(
f.getAbsolutePath())); // may not actually exist
if (!f.delete())
logger.error(
"Unable to remove "
+ f
+ "; you should remove it manually or next restart will replay it again (harmless, but time-consuming)");
}
logger.info("Log replay complete");
}
public static void recover() throws IOException {
String directory = DatabaseDescriptor.getCommitLogLocation();
File[] files =
new File(directory)
.listFiles(
new FilenameFilter() {
public boolean accept(File dir, String name) {
// we used to try to avoid instantiating commitlog (thus creating an empty
// segment ready for writes)
// until after recover was finished. this turns out to be fragile; it is less
// error-prone to go
// ahead and allow writes before recover(), and just skip active segments when
// we do.
return CommitLogSegment.possibleCommitLogFile(name) && !instance.manages(name);
}
});
if (files.length == 0) {
logger.info("No commitlog files found; skipping replay");
return;
}
Arrays.sort(files, new FileUtils.FileComparator());
logger.info("Replaying " + StringUtils.join(files, ", "));
recover(files);
for (File f : files) {
FileUtils.delete(
CommitLogHeader.getHeaderPathFromSegmentPath(
f.getAbsolutePath())); // may not actually exist
if (!f.delete())
logger.error(
"Unable to remove "
+ f
+ "; you should remove it manually or next restart will replay it again (harmless, but time-consuming)");
}
logger.info("Log replay complete");
}
public static void recover(File[] clogs) throws IOException {
Set<Table> tablesRecovered = new HashSet<Table>();
List<Future<?>> futures = new ArrayList<Future<?>>();
byte[] bytes = new byte[4096];
Map<Integer, AtomicInteger> invalidMutations = new HashMap<Integer, AtomicInteger>();
for (File file : clogs) {
int bufferSize = (int) Math.min(file.length(), 32 * 1024 * 1024);
BufferedRandomAccessFile reader =
new BufferedRandomAccessFile(file.getAbsolutePath(), "r", bufferSize);
try {
CommitLogHeader clHeader = null;
int replayPosition = 0;
String headerPath = CommitLogHeader.getHeaderPathFromSegmentPath(file.getAbsolutePath());
try {
clHeader = CommitLogHeader.readCommitLogHeader(headerPath);
replayPosition = clHeader.getReplayPosition();
} catch (IOException ioe) {
logger.info(
headerPath
+ " incomplete, missing or corrupt. Everything is ok, don't panic. CommitLog will be replayed from the beginning");
logger.debug("exception was", ioe);
}
if (replayPosition < 0) {
logger.debug("skipping replay of fully-flushed {}", file);
continue;
}
reader.seek(replayPosition);
if (logger.isDebugEnabled())
logger.debug("Replaying " + file + " starting at " + reader.getFilePointer());
/* read the logs populate RowMutation and apply */
while (!reader.isEOF()) {
if (logger.isDebugEnabled())
logger.debug("Reading mutation at " + reader.getFilePointer());
long claimedCRC32;
Checksum checksum = new CRC32();
int serializedSize;
try {
// any of the reads may hit EOF
serializedSize = reader.readInt();
long claimedSizeChecksum = reader.readLong();
checksum.update(serializedSize);
if (checksum.getValue() != claimedSizeChecksum || serializedSize <= 0)
break; // entry wasn't synced correctly/fully. that's ok.
if (serializedSize > bytes.length) bytes = new byte[(int) (1.2 * serializedSize)];
reader.readFully(bytes, 0, serializedSize);
claimedCRC32 = reader.readLong();
} catch (EOFException eof) {
break; // last CL entry didn't get completely written. that's ok.
}
checksum.update(bytes, 0, serializedSize);
if (claimedCRC32 != checksum.getValue()) {
// this entry must not have been fsynced. probably the rest is bad too,
// but just in case there is no harm in trying them (since we still read on an entry
// boundary)
continue;
}
/* deserialize the commit log entry */
ByteArrayInputStream bufIn = new ByteArrayInputStream(bytes, 0, serializedSize);
RowMutation rm = null;
try {
rm = RowMutation.serializer().deserialize(new DataInputStream(bufIn));
} catch (UnserializableColumnFamilyException ex) {
AtomicInteger i = invalidMutations.get(ex.cfId);
if (i == null) {
i = new AtomicInteger(1);
invalidMutations.put(ex.cfId, i);
} else i.incrementAndGet();
continue;
}
if (logger.isDebugEnabled())
logger.debug(
String.format(
"replaying mutation for %s.%s: %s",
rm.getTable(),
rm.key(),
"{" + StringUtils.join(rm.getColumnFamilies(), ", ") + "}"));
final Table table = Table.open(rm.getTable());
tablesRecovered.add(table);
final Collection<ColumnFamily> columnFamilies =
new ArrayList<ColumnFamily>(rm.getColumnFamilies());
final long entryLocation = reader.getFilePointer();
final CommitLogHeader finalHeader = clHeader;
final RowMutation frm = rm;
Runnable runnable =
new WrappedRunnable() {
public void runMayThrow() throws IOException {
RowMutation newRm = new RowMutation(frm.getTable(), frm.key());
// Rebuild the row mutation, omitting column families that a) have already been
// flushed,
// b) are part of a cf that was dropped. Keep in mind that the cf.name() is
// suspect. do every
// thing based on the cfid instead.
for (ColumnFamily columnFamily : columnFamilies) {
if (CFMetaData.getCF(columnFamily.id()) == null)
// null means the cf has been dropped
continue;
if (finalHeader == null
|| (finalHeader.isDirty(columnFamily.id())
&& entryLocation >= finalHeader.getPosition(columnFamily.id())))
newRm.add(columnFamily);
}
if (!newRm.isEmpty()) {
Table.open(newRm.getTable()).apply(newRm, null, false);
}
}
};
futures.add(StageManager.getStage(Stage.MUTATION).submit(runnable));
if (futures.size() > MAX_OUTSTANDING_REPLAY_COUNT) {
FBUtilities.waitOnFutures(futures);
futures.clear();
}
}
} finally {
reader.close();
logger.info("Finished reading " + file);
}
}
for (Map.Entry<Integer, AtomicInteger> entry : invalidMutations.entrySet())
logger.info(
String.format(
"Skipped %d mutations from unknown (probably removed) CF with id %d",
entry.getValue().intValue(), entry.getKey()));
// wait for all the writes to finish on the mutation stage
FBUtilities.waitOnFutures(futures);
logger.debug("Finished waiting on mutations from recovery");
// flush replayed tables
futures.clear();
for (Table table : tablesRecovered) futures.addAll(table.flush());
FBUtilities.waitOnFutures(futures);
logger.info("Recovery complete");
}