private void loadGlobalConceptDomains() throws Exception {
logger.log("Load Concept Domains", LogMessageType.Process);
BindingsParser parser =
new BindingsParser(
new CSFileInputStream(new CSFile(termDir + "bindings.xml")),
termDir + "bindings.xml",
srcDir,
registry);
List<BindingSpecification> cds = parser.parse();
for (BindingSpecification cd : cds) {
definitions.getBindings().put(cd.getName(), cd);
definitions.getCommonBindings().add(cd);
}
for (BindingSpecification cd : definitions.getBindings().values()) {
if (cd.getBinding() == BindingSpecification.Binding.CodeList) {
if (!parser.loadCodes(cd)) {
File file = new CSFile(termDir + cd.getReference().substring(1) + ".csv");
if (!file.exists())
throw new Exception(
"code source file not found for " + cd.getName() + ": " + file.getAbsolutePath());
CodeListParser cparser = new CodeListParser(new CSFileInputStream(file));
cparser.parse(cd.getCodes());
cparser.close();
}
}
if (cd.getBinding() == Binding.ValueSet && !Utilities.noString(cd.getReference())) {
if (cd.getReference().startsWith("http://hl7.org/fhir")) {
// ok, it's a reference to a value set defined within this build. Since it's an absolute
// reference, it's into the base infrastructure. That's not loaded yet, so we will try
// to resolve it later
} else if (new File(Utilities.appendSlash(termDir) + cd.getReference() + ".xml").exists()) {
XmlParser p = new XmlParser();
FileInputStream input =
new FileInputStream(Utilities.appendSlash(termDir) + cd.getReference() + ".xml");
cd.setReferredValueSet((ValueSet) p.parse(input));
} else if (new File(Utilities.appendSlash(termDir) + cd.getReference() + ".json")
.exists()) {
JsonParser p = new JsonParser();
FileInputStream input =
new FileInputStream(Utilities.appendSlash(termDir) + cd.getReference() + ".json");
cd.setReferredValueSet((ValueSet) p.parse(input));
} else
throw new Exception(
"Unable to find source for "
+ cd.getReference()
+ " ("
+ Utilities.appendSlash(termDir)
+ cd.getReference()
+ ".xml/json)");
}
}
}
