/** @return The path of a node */ private Path getNodePath(String nodeName) throws PipelineException { NodeID targetID = new NodeID(w.user, w.view, nodeName); NodeStatus targetStat = mclient.status(targetID); NodeMod targetMod = targetStat.getHeavyDetails().getWorkingVersion(); if (targetMod == null) throw new PipelineException( "No working version of the Target Scene Node (" + nodeName + ") exists " + "in the (" + w.view + ") working area owned by (" + PackageInfo.sUser + ")!"); Path targetPath; FileSeq fseq = targetMod.getPrimarySequence(); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || (!suffix.equals("ma") && !suffix.equals("mb"))) throw new PipelineException("The target node (" + nodeName + ") must be a maya scene!"); targetPath = new Path(PackageInfo.sProdPath, targetID.getWorkingParent() + "/" + fseq.getFile(0)); // System.err.println("$WORKING"+nodeName+"."+suffix); return targetPath; } // end getNodePath(String)
/** * Updates the asset references for a shot within Maya and then in pipeline. * * @param shotName The name of the shot being processed. * @param pRemoveRef The list of assets being dereferenced from the shot. * @param pReplaceRef The list of assets being referenced into the shot. * @param nameMap */ private void editShotReferences( String shotName, NodeMod targetMod, TreeSet<String> pRemoveRef, TreeSet<String> pReplaceRef, TreeMap<String, String> nameMap) throws PipelineException { logLine("Editing shot: " + shotName); boolean anim = !shotName.matches(lgtPattern); /* writing the mel script */ if (anim) { File script = null; try { script = File.createTempFile("UpdateAssetGUI.", ".mel", PackageInfo.sTempPath.toFile()); FileCleaner.add(script); } // end try catch (IOException ex) { throw new PipelineException( "Unable to create the temporary MEL script used to collect " + "texture information from the Maya scene!"); } // end catch try { PrintWriter out = new PrintWriter(new BufferedWriter(new FileWriter(script))); for (String asset : pReplaceRef) { String nameSpace; if (asset.endsWith(lr)) nameSpace = nameMap.get(getShortName(asset.substring(0, asset.length() - 3))); else { System.err.println("This should not be happening, a hi res asset in a lo-res node."); continue; // nameSpace = nameMap.get(getShortName(asset)); } out.println("print (\"referencing file: $WORKING" + asset + ".ma\");"); out.println( "file -reference -namespace \"" + nameSpace + "\" \"$WORKING" + asset + ".ma\";"); } // end for for (String asset : pRemoveRef) { out.println("print (\"dereferencing file: $WORKING" + asset + ".ma\");"); out.println("file -rr \"$WORKING" + asset + ".ma\";"); } // end for out.println("// SAVE"); out.println("file -save;"); out.close(); } // end try catch (IOException ex) { throw new PipelineException( "Unable to write the temporary MEL script(" + script + ") used add the references!"); } // end catch NodeID targetID = new NodeID(w.user, w.view, shotName); // NodeStatus targetStat = mclient.status(targetID); /* run Maya to collect the information */ try { Path targetPath = getNodePath(shotName); ArrayList<String> args = new ArrayList<String>(); args.add("-batch"); args.add("-script"); args.add(script.getPath()); args.add("-file"); args.add(targetPath.toOsString()); Path wdir = new Path(PackageInfo.sProdPath.toOsString() + targetID.getWorkingParent()); TreeMap<String, String> env = mclient.getToolsetEnvironment( w.user, w.view, targetMod.getToolset(), PackageInfo.sOsType); Map<String, String> nenv = env; String midefs = env.get("PIPELINE_MI_SHADER_PATH"); if (midefs != null) { nenv = new TreeMap<String, String>(env); Path dpath = new Path(new Path(wdir, midefs)); nenv.put("MI_CUSTOM_SHADER_PATH", dpath.toOsString()); } String command = "maya"; if (PackageInfo.sOsType.equals(OsType.Windows)) command += ".exe"; SubProcessLight proc = new SubProcessLight("UpdateAssetGUI", command, args, env, wdir.toFile()); try { proc.start(); proc.join(); if (!proc.wasSuccessful()) { throw new PipelineException( "Did not correctly edit the reference due to a maya error.!\n\n" + proc.getStdOut() + "\n\n" + proc.getStdErr()); } // end if } // end try catch (InterruptedException ex) { throw new PipelineException(ex); } // end catch } // end try catch (Exception ex) { throw new PipelineException(ex); } // end catch } /*-edit the references in pipeline once they are done in the file-*/ BaseAction targetAction = targetMod.getAction(); for (String asset : pReplaceRef) { mclient.link( w.user, w.view, shotName, asset, LinkPolicy.Reference, LinkRelationship.All, null); if (anim) { /*Set the namespaces*/ String nameSpace = nameMap.get(getShortName(asset.substring(0, asset.length() - 3))); System.err.println(nameSpace); targetAction.initSourceParams(asset); targetAction.setSourceParamValue(asset, "PrefixName", nameSpace); targetMod.setAction(targetAction); } } w.mclient.modifyProperties(w.user, w.view, targetMod); for (String asset : pRemoveRef) mclient.unlink(w.user, w.view, shotName, asset); if (!anim) { System.err.println("Queuing the switchLgt node " + shotName); mclient.submitJobs(w.user, w.view, shotName, null); } } // end editShotReferences
/** * Construct a {@link SubProcessHeavy SubProcessHeavy} instance which when executed will fulfill * the given action agenda. * * <p> * * @param agenda The agenda to be accomplished by the action. * @param outFile The file to which all STDOUT output is redirected. * @param errFile The file to which all STDERR output is redirected. * @return The SubProcess which will fulfill the agenda. * @throws PipelineException If unable to prepare a SubProcess due to illegal, missing or * imcompatable information in the action agenda or a general failure of the prep method code. */ public SubProcessHeavy prep(ActionAgenda agenda, File outFile, File errFile) throws PipelineException { NodeID nodeID = agenda.getNodeID(); /* sanity checks */ Path loadScene = null; Path saveScene = null; boolean isAscii = false; TreeMap<Integer, LinkedList<Path>> mel = new TreeMap<Integer, LinkedList<Path>>(); { /* generate the filename of the Maya scene to load */ { String sname = (String) getSingleParamValue("MayaScene"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Maya Scene node (" + sname + ") was not one of the source " + "nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("ma") || suffix.equals("mb"))) throw new PipelineException( "The MayaMEL Action requires that the source node specified by the Maya " + "Scene parameter (" + sname + ") must have a single Maya scene file as " + "its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); loadScene = new Path(PackageInfo.sProdPath, snodeID.getWorkingParent() + "/" + fseq.getPath(0)); } } /* generate the name of the Maya scene to save */ { Boolean save = (Boolean) getSingleParamValue("SaveResult"); if ((save != null) && save) { FileSeq fseq = agenda.getPrimaryTarget(); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("ma") || suffix.equals("mb"))) throw new PipelineException( "The MayaMEL Action requires that the primary target file sequence must " + "be a single Maya scene file if the Save Result parameter is set!"); isAscii = suffix.equals("ma"); saveScene = new Path(PackageInfo.sProdPath, nodeID.getWorkingParent() + "/" + fseq.getPath(0)); } } /* generate the table of MEL script files to evaluate */ for (String sname : getSourceNames()) { Integer order = (Integer) getSourceParamValue(sname, "Order"); FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow an per-source Order parameter exists for a node (" + sname + ") " + "which was not one of the source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !suffix.equals("mel")) throw new PipelineException( "The MayaMEL Action requires that the source node (" + sname + ") with " + "per-source Order parameter must have a single MEL script file as its " + "primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); Path script = new Path(PackageInfo.sProdPath, snodeID.getWorkingParent() + "/" + fseq.getPath(0)); LinkedList<Path> scripts = mel.get(order); if (scripts == null) { scripts = new LinkedList<Path>(); mel.put(order, scripts); } scripts.add(script); } } /* create a temporary MEL script file */ File script = createTemp(agenda, 0755, "mel"); try { FileWriter out = new FileWriter(script); /* a workaround needed in "maya -batch" mode */ out.write("// WORK AROUNDS:\n" + "lightlink -q;\n\n"); /* rename the current scene as the output scene */ if (saveScene != null) { out.write( "// SCENE SETUP\n" + "file -rename \"" + saveScene + "\";\n" + "file -type \"" + (isAscii ? "mayaAscii" : "mayaBinary") + "\";\n\n"); } /* evaluate the MEL scripts */ if (!mel.isEmpty()) { out.write("// MEL SCRIPTS \n"); for (LinkedList<Path> scripts : mel.values()) { for (Path spath : scripts) out.write("source \"" + spath + "\";\n"); } out.write("\n"); } /* save the file */ if (saveScene != null) out.write("// SAVE\n" + "file -save;\n"); out.close(); } catch (IOException ex) { throw new PipelineException( "Unable to write temporary MEL script file (" + script + ") for Job " + "(" + agenda.getJobID() + ")!\n" + ex.getMessage()); } /* create the process to run the action */ try { ArrayList<String> args = new ArrayList<String>(); args.add("-batch"); args.add("-script"); args.add(script.getPath()); if (loadScene != null) { args.add("-file"); args.add(loadScene.toOsString()); } String program = "maya"; if (PackageInfo.sOsType == OsType.Windows) program = (program + ".exe"); return new SubProcessHeavy( agenda.getNodeID().getAuthor(), getName() + "-" + agenda.getJobID(), program, args, agenda.getEnvironment(), agenda.getWorkingDir(), outFile, errFile); } catch (Exception ex) { throw new PipelineException( "Unable to generate the SubProcess to perform this Action!\n" + ex.getMessage()); } }
/** * Construct a {@link SubProcessHeavy SubProcessHeavy} instance which when executed will fulfill * the given action agenda. * * <p> * * @param agenda The agenda to be accomplished by the action. * @param outFile The file to which all STDOUT output is redirected. * @param errFile The file to which all STDERR output is redirected. * @return The SubProcess which will fulfill the agenda. * @throws PipelineException If unable to prepare a SubProcess due to illegal, missing or * imcompatable information in the action agenda or a general failure of the prep method code. */ public SubProcessHeavy prep(ActionAgenda agenda, File outFile, File errFile) throws PipelineException { NodeID nodeID = agenda.getNodeID(); /* sanity checks */ String opname = null; File source = null; File preRender = null; File postRender = null; File preFrame = null; File postFrame = null; { { FileSeq fseq = agenda.getPrimaryTarget(); if (!fseq.hasFrameNumbers()) throw new PipelineException( "The HfsComposite Action requires that the output images have frame numbers."); } /* generate the filename of the Houdini scene to load */ { String sname = (String) getSingleParamValue("HoudiniScene"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Houdini Scene node (" + sname + ") was not one of the source " + "nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !suffix.equals("hip")) throw new PipelineException( "The HfsComposite Action requires that the source node specified by the " + "Houdini Scene parameter (" + sname + ") must have a single Houdini scene " + "file (.hip) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); source = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } else { throw new PipelineException( "The HfsComposite Action requires the Houdini Scene parameter to be set!"); } } /* the full name of the geometry output operator */ { String name = (String) getSingleParamValue("OutputOperator"); if ((name == null) || (name.length() == 0)) throw new PipelineException( "The HfsComposite Action requires a valid Output Operator name!"); opname = ("/out/" + name); } /* command script files */ { String sname = (String) getSingleParamValue("PreRenderScript"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Pre Render Script node (" + sname + ") was not one of the " + "source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("cmd"))) throw new PipelineException( "The HfsComposite Action requires that the source node specified by the Pre " + "Render Script parameter (" + sname + ") must have a single command script " + "(.cmd) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); preRender = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } } { String sname = (String) getSingleParamValue("PostRenderScript"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Post Render Script node (" + sname + ") was not one of the " + "source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("cmd"))) throw new PipelineException( "The HfsComposite Action requires that the source node specified by the " + "Post Render Script parameter (" + sname + ") must have a single command " + "script (.cmd) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); postRender = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } } { String sname = (String) getSingleParamValue("PreFrameScript"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Pre Frame Script node (" + sname + ") was not one of the " + "source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("cmd"))) throw new PipelineException( "The HfsComposite Action requires that the source node specified by the Pre " + "Frame Script parameter (" + sname + ") must have a single command script " + "(.cmd) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); preFrame = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } } { String sname = (String) getSingleParamValue("PostFrameScript"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Post Frame Script node (" + sname + ") was not one of the " + "source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("cmd"))) throw new PipelineException( "The HfsComposite Action requires that the source node specified by the " + "Post Frame Script parameter (" + sname + ") must have a single command " + "script (.cmd) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); postFrame = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } } } /* create the temporary Houdini command script */ File hscript = createTemp(agenda, 0644, "cmd"); try { FileWriter out = new FileWriter(hscript); FileSeq fseq = new FileSeq( PackageInfo.sProdDir.getPath() + nodeID.getWorkingParent(), agenda.getPrimaryTarget()); if (fseq.hasFrameNumbers()) { FilePattern fpat = fseq.getFilePattern(); FrameRange frange = fseq.getFrameRange(); out.write( "opparm " + opname + " trange on\n" + "opparm " + opname + " f1 " + frange.getStart() + "\n" + "opparm " + opname + " f2 " + frange.getEnd() + "\n" + "opparm " + opname + " f3 " + frange.getBy() + "\n" + "opparm " + opname + " copoutput '" + fpat.getPrefix() + ".$F"); if (fpat.getPadding() > 1) out.write(String.valueOf(fpat.getPadding())); out.write("." + fpat.getSuffix() + "'\n"); } else { out.write("opparm " + opname + " trange off\n" + "opparm " + opname + " " + fseq + "\n"); } if (preRender != null) out.write("opparm " + opname + " prerender '" + preRender + "'\n"); if (postRender != null) out.write("opparm " + opname + " postrender '" + postRender + "'\n"); if (preFrame != null) out.write("opparm " + opname + " preframe '" + preFrame + "'\n"); if (postFrame != null) out.write("opparm " + opname + " postframe '" + postFrame + "'\n"); out.write("opparm -c " + opname + " execute\n"); out.close(); } catch (IOException ex) { throw new PipelineException( "Unable to write temporary script file (" + hscript + ") for Job " + "(" + agenda.getJobID() + ")!\n" + ex.getMessage()); } /* create the wrapper shell script */ File script = createTemp(agenda, 0755, "bash"); try { FileWriter out = new FileWriter(script); out.write("#!/bin/bash\n\n" + "cat " + hscript + " | hscript -v " + source); out.close(); } catch (IOException ex) { throw new PipelineException( "Unable to write temporary script file (" + script + ") for Job " + "(" + agenda.getJobID() + ")!\n" + ex.getMessage()); } try { return new SubProcessHeavy( agenda.getNodeID().getAuthor(), getName() + "-" + agenda.getJobID(), script.getPath(), new ArrayList<String>(), agenda.getEnvironment(), agenda.getWorkingDir(), outFile, errFile); } catch (Exception ex) { throw new PipelineException( "Unable to generate the SubProcess to perform this Action!\n" + ex.getMessage()); } }
/** * Construct a {@link SubProcessHeavy SubProcessHeavy} instance which when executed will fulfill * the given action agenda. * * <p> * * @param agenda The agenda to be accomplished by the action. * @param outFile The file to which all STDOUT output is redirected. * @param errFile The file to which all STDERR output is redirected. * @return The SubProcess which will fulfill the agenda. * @throws PipelineException If unable to prepare a SubProcess due to illegal, missing or * imcompatable information in the action agenda or a general failure of the prep method code. */ public SubProcessHeavy prep(ActionAgenda agenda, File outFile, File errFile) throws PipelineException { NodeID nodeID = agenda.getNodeID(); /* sanity checks */ File targetScene = null; ArrayList<File> sourceScenes = new ArrayList<File>(); ArrayList<String> mergePatterns = new ArrayList<String>(); File preBuild = null; File postBuild = null; File preScene = null; File postScene = null; { DoubleMap<Integer, String, TreeSet<FileSeq>> sources = new DoubleMap<Integer, String, TreeSet<FileSeq>>(); for (String sname : agenda.getSourceNames()) { if (hasSourceParams(sname)) { FileSeq fseq = agenda.getPrimarySource(sname); Integer order = (Integer) getSourceParamValue(sname, "Order"); addSourceSeq(order, sname, fseq, sources); } for (FileSeq fseq : agenda.getSecondarySources(sname)) { FilePattern fpat = fseq.getFilePattern(); if (hasSecondarySourceParams(sname, fpat)) { Integer order = (Integer) getSecondarySourceParamValue(sname, fpat, "Order"); addSourceSeq(order, sname, fseq, sources); } } } for (Integer order : sources.keySet()) { for (String sname : sources.get(order).keySet()) { for (FileSeq fseq : sources.get(order).get(sname)) { String pattern = null; if (fseq.equals(agenda.getPrimarySource(sname))) pattern = (String) getSourceParamValue(sname, "MergePattern"); else { FilePattern fpat = fseq.getFilePattern(); pattern = (String) getSecondarySourceParamValue(sname, fpat, "MergePattern"); } if ((pattern == null) || (pattern.length() == 0)) throw new PipelineException( "The Merge Pattern for file sequence (" + fseq + ") of source node " + "(" + sname + ") was not specified!"); NodeID snodeID = new NodeID(nodeID, sname); File sfile = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); sourceScenes.add(sfile); mergePatterns.add(pattern); } } } /* generate the name of the Houdini scene to save */ { FileSeq fseq = agenda.getPrimaryTarget(); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !suffix.equals("hip")) throw new PipelineException( "The HfsBuild Action requires that the primary target file sequence must " + "be a single Houdini scene file!"); targetScene = new File(PackageInfo.sProdDir, nodeID.getWorkingParent() + "/" + fseq.getFile(0)); } /* command script files */ { String sname = (String) getSingleParamValue("PreBuildScript"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Pre Build Script node (" + sname + ") was not one of the " + "source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("cmd"))) throw new PipelineException( "The HfsBuild Action requires that the source node specified by the Pre " + "Build Script parameter (" + sname + ") must have a single command " + "script (.cmd) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); preBuild = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } } { String sname = (String) getSingleParamValue("PostBuildScript"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Post Build Script node (" + sname + ") was not one of the " + "source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("cmd"))) throw new PipelineException( "The HfsBuild Action requires that the source node specified by the Post " + "Build Script parameter (" + sname + ") must have a single command " + "script (.cmd) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); postBuild = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } } { String sname = (String) getSingleParamValue("PreSceneScript"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Pre Scene Script node (" + sname + ") was not one of the " + "source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("cmd"))) throw new PipelineException( "The HfsBuild Action requires that the source node specified by the Pre " + "Scene Script parameter (" + sname + ") must have a single command script " + "(.cmd) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); preScene = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } } { String sname = (String) getSingleParamValue("PostSceneScript"); if (sname != null) { FileSeq fseq = agenda.getPrimarySource(sname); if (fseq == null) throw new PipelineException( "Somehow the Post Scene Script node (" + sname + ") was not one of the " + "source nodes!"); String suffix = fseq.getFilePattern().getSuffix(); if (!fseq.isSingle() || (suffix == null) || !(suffix.equals("cmd"))) throw new PipelineException( "The HfsBuild Action requires that the source node specified by the Post " + "Scene Script parameter (" + sname + ") must have a single command script " + "(.cmd) as its primary file sequence!"); NodeID snodeID = new NodeID(nodeID, sname); postScene = new File(PackageInfo.sProdDir, snodeID.getWorkingParent() + "/" + fseq.getFile(0)); } } } /* create the temporary Houdini command script */ File hscript = createTemp(agenda, 0644, "cmd"); try { FileWriter out = new FileWriter(hscript); if (preBuild != null) out.write("source " + preBuild + "\n"); /* load the source scenes */ int wk; for (wk = 0; wk < sourceScenes.size(); wk++) { File sourceScene = sourceScenes.get(wk); String pattern = mergePatterns.get(wk); if (preScene != null) out.write("source " + preScene + "\n"); out.write("mread"); if (wk > 0) out.write(" -o -m " + pattern); out.write(" " + sourceScene + "\n"); if (postScene != null) out.write("source " + postScene + "\n"); } if (postBuild != null) out.write("source " + postBuild + "\n"); /* save the file */ out.write("mwrite " + targetScene + "\n"); out.close(); } catch (IOException ex) { throw new PipelineException( "Unable to write temporary command file (" + hscript + ") for Job " + "(" + agenda.getJobID() + ")!\n" + ex.getMessage()); } /* create the wrapper shell script */ File script = createTemp(agenda, 0755, "bash"); try { FileWriter out = new FileWriter(script); out.write("#!/bin/bash\n\n" + "cat " + hscript + " | hscript"); out.close(); } catch (IOException ex) { throw new PipelineException( "Unable to write temporary script file (" + script + ") for Job " + "(" + agenda.getJobID() + ")!\n" + ex.getMessage()); } try { return new SubProcessHeavy( agenda.getNodeID().getAuthor(), getName() + "-" + agenda.getJobID(), script.getPath(), new ArrayList<String>(), agenda.getEnvironment(), agenda.getWorkingDir(), outFile, errFile); } catch (Exception ex) { throw new PipelineException( "Unable to generate the SubProcess to perform this Action!\n" + ex.getMessage()); } }