private List<String> makeCopyNames(List<WellCopy> wellCopyVolumes) {
Set<String> names = new TreeSet<String>();
for (WellCopy volume : wellCopyVolumes) {
names.add(volume.getCopy().getName());
}
return new ArrayList<String>(names);
}
private Volume calcTotalInitialVolume(Collection<WellCopy> wellCopies) {
Volume totalInitialVolume = new Volume(0);
if (wellCopies.size() > 0) {
for (WellCopy wellCopy : wellCopies) {
Plate plateForWellCopy = wellCopy.getCopy().getPlates().get(_well.getPlateNumber());
if (plateForWellCopy != null && plateForWellCopy.getWellVolume() != null) {
totalInitialVolume = totalInitialVolume.add(plateForWellCopy.getWellVolume());
}
}
}
return totalInitialVolume;
}
private AggregateWellInfo(List<WellCopy> wellCopies) {
_wellCopyVolumes = wellCopies;
Collections.sort(
_wellCopyVolumes,
new Comparator<WellCopy>() {
public int compare(WellCopy wcv1, WellCopy wcv2) {
return wcv1.getCopy().getName().compareTo(wcv2.getCopy().getName());
}
});
_totalInitialVolume = calcTotalInitialVolume(_wellCopyVolumes);
_consumedVolume = VolumeUnit.ZERO;
if (_wellCopyVolumes.size() > 0) {
_minWellCopyVolume = _maxWellCopyVolume = _wellCopyVolumes.iterator().next();
}
_volumeAdjustments = new ArrayList<WellVolumeAdjustment>();
for (WellCopy wellCopyVolume : _wellCopyVolumes) {
assert wellCopyVolume.getWell().equals(_well) : "all wellCopyVolumes must be for same well";
_consumedVolume = _consumedVolume.add(wellCopyVolume.getConsumedVolume());
if (wellCopyVolume.getRemainingVolume().compareTo(_minWellCopyVolume.getRemainingVolume())
< 0) {
_minWellCopyVolume = wellCopyVolume;
}
if (wellCopyVolume.getRemainingVolume().compareTo(_maxWellCopyVolume.getRemainingVolume())
> 0) {
_maxWellCopyVolume = wellCopyVolume;
}
_volumeAdjustments.addAll(wellCopyVolume.getWellVolumeAdjustments());
}
_copyNames = makeCopyNames(_wellCopyVolumes);
}
public WellVolume(Well well, Collection<WellCopy> wellCopies) {
super(well.getEntityId());
_well = well;
List<WellCopy> activeVolumes = new ArrayList<WellCopy>();
List<WellCopy> retiredVolumes = new ArrayList<WellCopy>();
for (WellCopy wc : wellCopies) {
Plate plate = wc.getCopy().getPlates().get(_well.getPlateNumber());
if (plate == null || plate.getStatus() != PlateStatus.RETIRED) {
activeVolumes.add(wc);
} else if (plate.getStatus() == PlateStatus.RETIRED) {
retiredVolumes.add(wc);
}
}
_activeWellInfo = new AggregateWellInfo(activeVolumes);
_retiredWellInfo = new AggregateWellInfo(retiredVolumes);
}
