static {
FILE_MAP.put(1, new File("s_1_1"));
FILE_MAP.put(2, new File("s_1_2"));
FILE_MAP.put(3, new File("s_1_3"));
FILE_MAP.put(4, new File("s_1_4"));
FILE_MAP.put(5, new File("s_1_5"));
FILE_TO_VALUE.put("s_1_1", makeList(1, 2, 3, 4, 5));
FILE_TO_VALUE.put("s_1_2", makeList(6, 7, 8, 9, 10));
FILE_TO_VALUE.put("s_1_3", makeList(11, 12, 13, 14, 15));
FILE_TO_VALUE.put("s_1_4", makeList(16, 17, 18, 19, 20));
FILE_TO_VALUE.put("s_1_5", makeList(21, 22, 23, 24, 25));
}
@Test
public void basicIterationTest() {
final IlluminaFileMap fm = new IlluminaFileMap();
fm.put(1, new File("s_1_1"));
fm.put(2, new File("s_1_2"));
fm.put(3, new File("s_1_3"));
fm.put(4, new File("s_1_4"));
fm.put(5, new File("s_1_5"));
final PerTileParser<DummyDt> ddts = new MockPerTileParser(fm);
for (int i = 0; i < 25; i++) {
Assert.assertTrue(ddts.hasNext());
Assert.assertEquals(ddts.next().value, new Integer(i + 1));
}
Assert.assertFalse(ddts.hasNext());
}
